CF509638
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509638 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.561e-40 Identity = 80/132 (60.61%), Postives = 101/132 (76.52%), Query Frame = 2 Query: 17 EQKMAQIGSSLLVPCVQELVKNPALV-VPDRYIRPDQDSPLISDDILIS-QIPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVV 406 E K A SS+LVP VQE+VK + VP RY+R DQD + DD + +IP+IDM+ L S +MDSE+ KLDFACKEWGFFQLVNHG+ ++FL+K+K E++ FFNL MEEKKK+WQRP ++EGFGQAFVV Sbjct: 2 EAKGAAQWSSILVPSVQEMVKEKTITTVPPRYVRSDQDKTEVDDDFDVKIEIPIIDMKRLCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPDEIEGFGQAFVV 133
BLAST of CF509638 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.607e-23 Identity = 57/130 (43.85%), Postives = 78/130 (60.00%), Query Frame = 2 Query: 20 QKMAQIGSSLLVPCVQELVKNPALVVPDRYIRPD--QDSPLISDDILISQIPVIDMQSLLSKESMDSELAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFV 403 + + +G SL V VQ L +P+RY+RP+ D + D+ L +IPVID+ LL ++ ELAK AC +WGFFQL+NHG+ +EK+K + E FF L +EK Y Q P MEG+GQAFV Sbjct: 3 KNLTGVGGSLPVENVQVLAGKELKNLPNRYVRPELEHDDVVPIDNSL--EIPVIDLSRLLDQQYACDELAKFHSACLDWGFFQLINHGVREEVIEKMKVDTEDFFRLPFKEKNAYRQLPNGMEGYGQAFV 130
BLAST of CF509638 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.775e-13 Identity = 42/120 (35.00%), Postives = 69/120 (57.50%), Query Frame = 2 Query: 62 VQELVKNPALVVPDRYIRPDQDSPLISDDILIS------QIPVIDMQSLLSKESMDSE--LAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QRPGDMEGFG 391 V+ L K+ + +P YIRP ++ I+D L Q+P ID++++ S + E + +L A +WG L+NHG+ +E++KK E FF+LS+EEK+KY Q G ++G+G Sbjct: 7 VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 126
BLAST of CF509638 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 1.799e-12 Identity = 37/116 (31.90%), Postives = 70/116 (60.34%), Query Frame = 2 Query: 71 LVKNPALV-----VPDRYIRPDQDSPLISDDILISQIPVIDMQSLLSKESMDSELAKL-DFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAF 400 L+ NP+++ +P+++I PD + P I+ +L +P+ID+Q+LLS S + ++L ACK+ GFF +VNHG+S + + FF++ + EK++ ++ G+ G+ +F Sbjct: 27 LIFNPSMLNLQANIPNQFIWPDDEKPSIN--VLELDVPLIDLQNLLSDPSSTLDASRLISEACKKHGFFLVVNHGISEELISDAHEYTSRFFDMPLSEKQRVLRKSGESVGYASSF 140 The following BLAST results are available for this feature:
BLAST of CF509638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509638 ID=CF509638; Name=CF509638; organism=Citrus sinensis; type=EST; length=406bpback to top |