CF509669
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF509669 vs. ExPASy Swiss-Prot
Match: BH068_ARATH (Transcription factor bHLH68 OS=Arabidopsis thaliana GN=BHLH68 PE=2 SV=2) HSP 1 Score: 221.476 bits (563), Expect = 3.354e-57 Identity = 122/199 (61.31%), Postives = 136/199 (68.34%), Query Frame = 2 Query: 20 SSNMLDFTSTK-----ADARHPPPDRSSECNSTASGGAAKKARVXXXXXXXXXXXFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGSSGSAAMRQQQHSQ-----------HPLLNDNCMKRKGTS----DHQESQEEVKKSLRSRGLCLVPVSCTLQVGSDNGADYWAPALGGGG 556 ++NMLDF+S ++ RH PPDRSSECNS GG+ K + KVRKEKLG RI ALHQLVSPFGKTDTASVL EAIGYIRFLQSQIEALS PY G++ S MR QQH Q L+ND CMKR+G S D+Q + EE KK LRSRGLCLVP+SCTLQVGSDNGADYWAPALG G Sbjct: 208 NNNMLDFSSNHNGLHLSEGRHTPPDRSSECNSLEIGGSTNK-KPRLQPSPSSQSTLKVRKEKLGGRIAALHQLVSPFGKTDTASVLSEAIGYIRFLQSQIEALSHPYFGTTASGNMRHQQHLQGDRSCIFPEDPGQLVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQVGSDNGADYWAPALGSAG 405
BLAST of CF509669 vs. ExPASy Swiss-Prot
Match: BH133_ARATH (Transcription factor bHLH133 OS=Arabidopsis thaliana GN=BHLH133 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.512e-41 Identity = 98/170 (57.65%), Postives = 112/170 (65.88%), Query Frame = 2 Query: 86 SECNSTASGGAAKKARVXXXXXXXXXXXFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGSSGSAAMRQQQHSQH-----------PLLNDNCMKR---KGTSDHQES--QEEVKKSLRSRGLCLVPVSCTLQVGSDNGADYWAPALG 547 SECNS+ G++ + KVRKEKLG RI +LHQLVSPFGKTDTASVL EAIGYIRFL SQIEALSLPY G+ M QH+Q L+N+ CMKR ++D+Q+S EE K LRSRGLCLVP+SCTLQVGSDNGADYWAPA G Sbjct: 190 SECNSSEMIGSSFANKKPKLQVPSSQSTLKVRKEKLGGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIEALSLPYFGTPSRNNM-MHQHAQRNMNGIFPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNEEPMKDLRSRGLCLVPISCTLQVGSDNGADYWAPAFG 358
BLAST of CF509669 vs. ExPASy Swiss-Prot
Match: BH110_ARATH (Transcription factor bHLH110 OS=Arabidopsis thaliana GN=BHLH110 PE=2 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.918e-28 Identity = 79/159 (49.69%), Postives = 90/159 (56.60%), Query Frame = 2 Query: 104 ASGGAAKKARVXXXXXXXXXXXFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGSSGSAAMRQQQHSQHPLLNDNCMKRKGTSDHQESQEEVKKSLRSRGLCLVPVSCTLQVGSDN-------GADYW--APALGGG 553 A A+KK RV FKVRKEKLGDRI AL QLVSPFGKTDTASVL+EAIGYI+FLQSQIE LS+PY+ +S + + Q S QE EE + LRSRGLCLVP+SC V D G +W P GGG Sbjct: 312 AGENASKKPRVESRSSCPP---FKVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYMRASRNRPGKASQL---------------VSQSQEGDEEETRDLRSRGLCLVPLSCMTYVTGDGGDGGGGVGTGFWPTPPGFGGG 452
BLAST of CF509669 vs. ExPASy Swiss-Prot
Match: BH112_ARATH (Transcription factor bHLH112 OS=Arabidopsis thaliana GN=BHLH112 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.519e-25 Identity = 71/149 (47.65%), Postives = 84/149 (56.38%), Query Frame = 2 Query: 116 AAKKARVXXXXXXXXXXXFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGSSGSAAMRQQQHSQHPLLNDNCMKRKGTSDHQESQEEVKKSLRSRGLCLVPVSCTLQVGSDNGADYWAPALGGGGLR 562 AAKK RV FKVRKE L D+IT+L QLVSPFGKTDTASVL EAI YI+FL Q+ LS PY+ G++ +QQQ S G S Q+ E LR GLCLVP+S T V ++ AD+W P GG R Sbjct: 264 AAKKPRVTTPSPLPT---FKVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLHDQVTVLSTPYM-KQGASNQQQQQIS-------------GKSKSQDENE--NHELRGHGLCLVPISSTFPVANETTADFWTPTFGGNNFR 393
BLAST of CF509669 vs. ExPASy Swiss-Prot
Match: BH123_ARATH (Transcription factor bHLH123 OS=Arabidopsis thaliana GN=BHLH123 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.385e-25 Identity = 74/162 (45.68%), Postives = 84/162 (51.85%), Query Frame = 2 Query: 80 RSSECNSTASGG-----AAKKARVXXXXXXXXXXXFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGSSGSAAMRQQQHSQHPLLNDNCMKRKGTSDHQESQEEVKKSLRSRGLCLVPVSCTLQVGSDNGADYWAPALGG 550 R S N GG AAK+A+ FK RKEK+GDRI AL QLVSPFGKTD ASVL EAI YI+FL Q+ ALS PY+ S S +Q HS E + + LRSRGLCLVPVS T V D D+W P GG Sbjct: 312 RDSSSNEVKRGGNDHQPAAKRAK---SEAASPSPAFK-RKEKMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQHQQSDHS------------------TELEVSEEPDLRSRGLCLVPVSSTFPVTHDTTVDFWTPTFGG 451
BLAST of CF509669 vs. ExPASy Swiss-Prot
Match: BH113_ARATH (Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.338e-24 Identity = 64/126 (50.79%), Postives = 78/126 (61.90%), Query Frame = 2 Query: 173 KVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGSSGSAAMRQQQHSQHPLLNDNCMKRKGTSDHQESQEEVKKSLRSRGLCLVPVSCTLQVGSDNGADYWAPALGG 550 KVRKE+LG+RI AL QLVSP+GKTD ASVL EA+GYI+FLQ QI+ L PYL +N + T D + + K LRSRGLCLVPVS T+ V + NGAD+W+PA G Sbjct: 154 KVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQDQIQVLCSPYL------------------INHSLDGGVVTGDVMAAMKA--KDLRSRGLCLVPVSSTVHVENSNGADFWSPATMG 259
BLAST of CF509669 vs. ExPASy Swiss-Prot
Match: BH114_ARATH (Transcription factor bHLH114 OS=Arabidopsis thaliana GN=BHLH114 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.271e-21 Identity = 60/114 (52.63%), Postives = 73/114 (64.04%), Query Frame = 2 Query: 170 FKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGSSGSAAMRQQQHSQHPLLNDNCMKRKGTSDHQESQEEVKKSLRSRGLCLVPVSCTLQVGS 511 FKVRKEKLGDRITAL QLVSPFGKTDTASVL EA+ YI+FLQ Q+ LS P + GS ++QQQ S N + +G + E L SRGLCL+P+S + V + Sbjct: 172 FKVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVLSNPEQNTIGS--VQQQQCS-----NKKSINTQGEVEEDECSPRRYVDLSSRGLCLMPISASYPVAA 278
BLAST of CF509669 vs. ExPASy Swiss-Prot
Match: BH103_ARATH (Transcription factor bHLH103 OS=Arabidopsis thaliana GN=BHLH103 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21 Identity = 61/112 (54.46%), Postives = 71/112 (63.39%), Query Frame = 2 Query: 170 FKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQI--EALSLPYLGSSGSAAMRQ-QQHSQHPLLNDNCMKRKGTSDHQESQEEVKKSLRSRGLCLVPVSCT 496 FKVRKEKLGDRITAL QLVSPFGKTDTASVL +AI YI+FLQ QI + + P+L S GS +Q S + N NC R + LRSRGLCL+P+S T Sbjct: 189 FKVRKEKLGDRITALQQLVSPFGKTDTASVLHDAIDYIKFLQEQITEKVSTSPHLNSIGSGEQKQWSDKSSNNTHNQNCSPR--------------QDLRSRGLCLMPISST 286
BLAST of CF509669 vs. ExPASy Swiss-Prot
Match: BH111_ARATH (Transcription factor bHLH111 OS=Arabidopsis thaliana GN=BHLH111 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17 Identity = 57/126 (45.24%), Postives = 67/126 (53.17%), Query Frame = 2 Query: 182 KEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGSSGSAAMRQQQHSQHPLLNDNCMKRKGTSDHQESQEEVKK--SLRSRGLCLVPVSCTLQVGSDNGA-DYWAPALGG 550 K KL D+IT L Q+VSPFGKTDTASVL EAI YI F Q Q++ LS PY + N + G D ++ + K LRSRGLCLVP+S T DN A DYW P G Sbjct: 208 KAKLRDKITTLQQIVSPFGKTDTASVLQEAITYINFYQEQVKLLSTPY------------------MKNSSMKDPWGGWDREDHNKRGPKHLDLRSRGLCLVPISYTPIAYRDNSATDYWNPTYRG 315 The following BLAST results are available for this feature:
BLAST of CF509669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509669 ID=CF509669; Name=CF509669; organism=Citrus sinensis; type=EST; length=685bpback to top |