CF509670
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF509670 vs. ExPASy Swiss-Prot
Match: ELP1_MOUSE (Elongator complex protein 1 OS=Mus musculus GN=Ikbkap PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 8.556e-22 Identity = 60/164 (36.59%), Postives = 86/164 (52.44%), Query Frame = 1 Query: 1 SQQDPKEFLPYLQELESMPPLLMRYTIDLRLQRFENALKHIVSMGDSYSADCLNLMKKYPQLFPLGLKLI-TDPAKMEQVLEAWADHLSDEKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVMKXXXXXXXXXXXXGKPGEAAKIALDY 489 SQ+DPKE+LP+L L+ M R+TID L+R+E AL H+ G Y +CLNL+K L+ LKL D + + V A+ +HL E +E A + C + EKA++A+ A G+W L VA L++ KD+V K EAA + Y Sbjct: 911 SQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKALGHLSKCGPEYFTECLNLIKD-KNLYKEALKLYRPDSPQYQAVSMAYGEHLMQEHLYEPAGLVFARCGAQEKALEAFLACGSWQQALCVAAQLQMSKDKVAGLARTLAGKLVEQRKHSEAATVLEQY 1073
BLAST of CF509670 vs. ExPASy Swiss-Prot
Match: ELP1_RAT (Elongator complex protein 1 OS=Rattus norvegicus GN=Ikbkap PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.906e-21 Identity = 62/168 (36.90%), Postives = 89/168 (52.98%), Query Frame = 1 Query: 1 SQQDPKEFLPYLQELESMPPLLMRYTIDLRLQRFENALKHIVSMGDSYSADCLNLMKKYPQLFPLGLKLI-TDPAKMEQVLEAWADHLSDEKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVMKXXXXXXXXXXXXGKPGEAAKI----ALDY 489 SQ+DPKE+LP+L L+ M R+TID L+R+E AL H+ G Y +CLNL+K L+ LKL D + + V A+ +HL E +E A + C + EKA++A+ A G+W L +A L++ KD+V K EAA + ALDY Sbjct: 909 SQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKALGHLSKCGPEYFTECLNLIKD-KNLYKEALKLYRPDSPQYQAVSVAYGEHLVQELLYEPAGLVFARCGAHEKALEAFLACGSWQQALCMAAQLQMAKDKVAGLARTLAGKLVEQRKHSEAATVLEQYALDY 1075
BLAST of CF509670 vs. ExPASy Swiss-Prot
Match: ELP1_HUMAN (Elongator complex protein 1 OS=Homo sapiens GN=IKBKAP PE=1 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 8.008e-20 Identity = 52/138 (37.68%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 1 SQQDPKEFLPYLQELESMPPLLMRYTIDLRLQRFENALKHIVSMGDSYSADCLNLMKKYPQLFPLGLKLITDPAKMEQVLE-AWADHLSDEKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVM 411 SQ+DPKE+LP+L L+ M R+TID L+R+E A+ H+ G Y +CLNL+K L+ LKL + ++ Q + A+ +HL E +E A + C + EKA+ A+ GNW L VA L KD+++ Sbjct: 910 SQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSKCGPEYFPECLNLIKD-KNLYNEALKLYSPSSQQYQDISIAYGEHLMQEHMYEPAGLMFARCGAHEKALSAFLTCGNWKQALCVAAQLNFTKDQLV 1046
BLAST of CF509670 vs. ExPASy Swiss-Prot
Match: ELP1_RABIT (Elongator complex protein 1 OS=Oryctolagus cuniculus GN=IKBKAP PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.789e-18 Identity = 47/137 (34.31%), Postives = 79/137 (57.66%), Query Frame = 1 Query: 1 SQQDPKEFLPYLQELESMPPLLMRYTIDLRLQRFENALKHIVSMGDSYSADCLNLMKKYPQLFPLGLKLITDPA-KMEQVLEAWADHLSDEKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEV 408 SQ+DPKE+LP+L L+ M R+TID L+R+E A+ H+ G Y ++CLNL+K L+ LKL + + + + A+ +HL +E +E A + C + EKA+ A+ G+W L +A L + ++++ Sbjct: 911 SQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSKCGPEYFSECLNLIKD-KNLYNEALKLYPPTSQEYKDISIAYGEHLMEEHQYEPAGLVFARCGAHEKALSAFLTCGSWQQTLCMAAQLNMTEEQL 1046
BLAST of CF509670 vs. ExPASy Swiss-Prot
Match: ELP1_XENLA (Putative elongator complex protein 1 OS=Xenopus laevis GN=ikbkap PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.848e-17 Identity = 52/164 (31.71%), Postives = 86/164 (52.44%), Query Frame = 1 Query: 1 SQQDPKEFLPYLQELESMPPLLMRYTIDLRLQRFENALKHIVSMGDSYSADCLNLMKKYPQLFPLGLKLIT-DPAKMEQVLEAWADHLSDEKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVMKXXXXXXXXXXXXGKPGEAAKIALDY 489 SQ+DPKE+LP+L +L+ M RYTID L+R++ AL ++ G Y + L+ +K L+ L+L + + + A+ DHL ++ +E A Y C+S+EKA+ A+ ASGNW V+ +A L+ +++ K +AA + Y Sbjct: 747 SQKDPKEYLPFLNKLKKMETNYQRYTIDKHLKRYKKALSNLSKCGPDYFTEFLSFVKD-QSLYTEALELYPHGTVEYKAINAAYGDHLVSKQQYELAGLIYARCNSIEKALDAFIASGNWHQVMCMASQLEYSGEKIAALARTVAGKLVEQRKQADAAVLLEQY 909
BLAST of CF509670 vs. ExPASy Swiss-Prot
Match: ELP1_YEAST (Elongator complex protein 1 OS=Saccharomyces cerevisiae GN=IKI3 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 42/129 (32.56%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 1 SQQDPKEFLPYLQELESMPPLLMRYTIDLRLQRFENALKHI--VSMGDSYSADCLNLMKKYPQLFPLGLKLIT-DPAKMEQVLEAWADHLSDEKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVA 378 SQ DP+E+LP+LQEL+ PL ++ ID L +E AL+H+ + + S + ++ ++ + L+ GL L D K + +A HLS + + DAA Y L++AM AY+++ W +++A Sbjct: 944 SQMDPREYLPFLQELQDNEPLRRKFLIDDYLGNYEKALEHLSEIDKDGNVSEEVIDYVESH-DLYKHGLALYRYDSEKQNVIYNIYAKHLSSNQMYTDAAVAYEMLGKLKEAMGAYQSAKRWREAMSIA 1071
BLAST of CF509670 vs. ExPASy Swiss-Prot
Match: ELP1_DROME (Putative elongator complex protein 1 OS=Drosophila melanogaster GN=CG10535 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.617e-12 Identity = 46/165 (27.88%), Postives = 89/165 (53.94%), Query Frame = 1 Query: 1 SQQDPKEFLPYLQELESMPPLLMRYTIDLRLQRFENALKHIVSMGDSYSADCLNLMKKYPQLFPLGLKLITDPAKMEQ-VLEAWADHLSDEKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVMKXXXXXXXXXXXXGKPGEAAKIALDYC 492 SQ+DPKEFLPYL +L+++P ++ ID L+R+ +AL H+ + G+ + + L ++K+ L+ GL + + ++ + A+ADHL ++A+ Y L++A+ + + + +W VL +A L D+V + G+ EA ++ ++C Sbjct: 839 SQKDPKEFLPYLNDLKALPIDYRKFRIDDHLKRYTSALSHLAACGEQHYEEALEYIRKH-GLYTDGLAFYREHIEFQKNIYVAYADHLRAIAKLDNASLMYERGGQLQQALLSAKHTLDWQRVLVLAKKLSEPLDQVAQ---SLVGPLQQQGRHMEAYELVKEHC 999
BLAST of CF509670 vs. ExPASy Swiss-Prot
Match: ELP1_SCHPO (Elongator complex protein 1 OS=Schizosaccharomyces pombe GN=iki3 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.795e-11 Identity = 37/126 (29.37%), Postives = 69/126 (54.76%), Query Frame = 1 Query: 1 SQQDPKEFLPYLQELESMPPLLMRYTIDLRLQRFENALKHIVSMGDSYSADCLNLMKKYPQLFPLGLKLIT-DPAKMEQVLEAWADHLSDEKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTV 375 SQ+DP+E++P+L E + L ++ ID L+R+E AL H+ M +++ D +L+P L+L D ++VL +A +L + +AA Y + +A++AY+++G W L++ Sbjct: 855 SQKDPREYVPFLHEFQKQESLRRKFNIDCYLKRYERALGHLKEMENAF--DEFKNFTIQHKLYPRALELYKYDKEAQKEVLIIFAQYLRENGKSNEAAIAYESVGKISEAIEAYKSAGMWRECLSI 978 The following BLAST results are available for this feature:
BLAST of CF509670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509670 ID=CF509670; Name=CF509670; organism=Citrus sinensis; type=EST; length=551bpback to top |