CF509674

Overview
NameCF509674
Unique NameCF509674
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig903 contig Csv1_Contig903:1..585. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 2.226e-79
Identity = 133/166 (80.12%), Postives = 149/166 (89.76%), Query Frame = 3
Query:    3 IALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            IALE+SKQT  P+EETRKKIWLVDSKGLIV SR +SLQ FKKPWAHEHE VK+L+DAV  IKPT+LIG+SG G+ FTKEV+EAMAS NEKP+I +LSNPTSQSECTAEEAYTW+QGRAIFASGSPFDP EY    FVPGQANNAYIFPGLG+GL++SGAIRVHD+M
Sbjct:  350 IALEMSKQTKCPIEETRKKIWLVDSKGLIVGSRKDSLQQFKKPWAHEHEPVKDLLDAVKVIKPTVLIGSSGVGKAFTKEVIEAMASCNEKPLILALSNPTSQSECTAEEAYTWTQGRAIFASGSPFDPVEYNGKTFVPGQANNAYIFPGLGMGLVISGAIRVHDEM 515          

HSP 2 Score: 36.5798 bits (83), Expect = 2.226e-79
Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2
Query:  536 TQENFDKGLLYPPFKN 583
            TQENFDKGL+YPPF N
Sbjct:  528 TQENFDKGLIYPPFSN 543          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 4.939e-79
Identity = 138/166 (83.13%), Postives = 151/166 (90.96%), Query Frame = 3
Query:    3 IALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            IA+E+SKQT  P+EETRKKIWLVDSKGLIVSSRLESLQ FKKPWAHEHE VK L++AV AIKPT+LIG+SG G+TFTKEVVE MASLNEKP+I +LSNPTSQSECTAEEAYTWS+GRAIFASGSPFDP EY   +FVPGQANNAYIFPG GLGLIMSGAIRV D+M
Sbjct:  348 IAVEVSKQTKAPVEETRKKIWLVDSKGLIVSSRLESLQQFKKPWAHEHEPVKGLLEAVKAIKPTVLIGSSGAGKTFTKEVVETMASLNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPVEYEGKLFVPGQANNAYIFPGFGLGLIMSGAIRVRDEM 513          

HSP 2 Score: 32.3426 bits (72), Expect = 4.939e-79
Identity = 11/16 (68.75%), Postives = 15/16 (93.75%), Query Frame = 2
Query:  536 TQENFDKGLLYPPFKN 583
            ++EN+DKGL+YPPF N
Sbjct:  526 SEENYDKGLIYPPFTN 541          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 1.561e-77
Identity = 134/166 (80.72%), Postives = 149/166 (89.76%), Query Frame = 3
Query:    3 IALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            IALEISKQTN PLEETRKKIWLVDSKGLIV SRL+SLQHFKKPWAH+HE V + +DAV AIKPT+LIG+SG G+TFTKEVVEAM+S NEKPII +LSNPTSQSECTAE+AYTWS+GR IFASGSPF P EY   V+V GQ+NNAYIFPG GLGLI+SGAIRVHD+M
Sbjct:  406 IALEISKQTNAPLEETRKKIWLVDSKGLIVRSRLDSLQHFKKPWAHDHEPVNKFLDAVKAIKPTVLIGSSGAGQTFTKEVVEAMSSFNEKPIILALSNPTSQSECTAEQAYTWSEGRTIFASGSPFAPVEYNGKVYVSGQSNNAYIFPGFGLGLIISGAIRVHDEM 571          

HSP 2 Score: 32.3426 bits (72), Expect = 1.561e-77
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 2
Query:  536 TQENFDKGLLYPPFKN 583
            TQE+FD GL+YPPF N
Sbjct:  584 TQEHFDNGLIYPPFTN 599          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 2.655e-77
Identity = 132/166 (79.52%), Postives = 150/166 (90.36%), Query Frame = 3
Query:    3 IALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            IALEISKQTN+PLEE+RKK+WLVDSKGLIV SRL+SLQHFKKPWAH+HE V E +DA+  I+PT+LIG+SG G+TFTKEVVE M+SLNEKPII +LSNPTSQSECTAE+AYTWS+GRAIFASGSPF P EY   ++V GQANNAYIFPG GLGLI+SGAIRVHDDM
Sbjct:  407 IALEISKQTNIPLEESRKKVWLVDSKGLIVRSRLDSLQHFKKPWAHDHEPVNEFLDAIKTIRPTVLIGSSGTGQTFTKEVVETMSSLNEKPIILALSNPTSQSECTAEQAYTWSEGRAIFASGSPFKPVEYNGKLYVSGQANNAYIFPGFGLGLIISGAIRVHDDM 572          

HSP 2 Score: 30.8018 bits (68), Expect = 2.655e-77
Identity = 11/14 (78.57%), Postives = 14/14 (100.00%), Query Frame = 2
Query:  536 TQENFDKGLLYPPF 577
            TQE+FDKGL++PPF
Sbjct:  585 TQEHFDKGLIFPPF 598          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 4.936e-76
Identity = 133/166 (80.12%), Postives = 151/166 (90.96%), Query Frame = 3
Query:    3 IALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            IALE+SKQT +PLEETRKKIW+VDSKGLIV SR+E LQHFK+PWAH+HE V+ELV+AV +IKPT+LIG+SG GRTFTKEVV+AMA+ NEKPIIF+LSNPTSQSECTAEEAY+WS+GRAIFASGSPF P EY   V+  GQANNAYIFPG GLGLI+SGAIRVHDDM
Sbjct:  333 IALEMSKQTGIPLEETRKKIWMVDSKGLIVKSRMEMLQHFKRPWAHDHEPVQELVNAVKSIKPTVLIGSSGAGRTFTKEVVQAMATFNEKPIIFALSNPTSQSECTAEEAYSWSEGRAIFASGSPFAPVEYNGKVYASGQANNAYIFPGFGLGLIISGAIRVHDDM 498          

HSP 2 Score: 26.5646 bits (57), Expect = 4.936e-76
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 2
Query:  536 TQENFDKGLLYPPFKN 583
            +QENF+KG   PPF N
Sbjct:  511 SQENFEKGTHIPPFSN 526          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 273.863 bits (699), Expect = 8.390e-76
Identity = 128/166 (77.11%), Postives = 147/166 (88.55%), Query Frame = 3
Query:    3 IALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            IALEISKQT  P+EE RKK+WL+DSKGLIV+SR ESLQ FKKPWAHEHE V  L+DAV +IKPT+LIGTSG G+TFTKEV+EAMAS NE+P+IFSLSNPTS SECTAEEAY WSQGRA+FASGSPFDP EY   + VPGQ+NNAYIFPG GLG+++SGA+RVH+DM
Sbjct:  398 IALEISKQTKAPIEECRKKVWLLDSKGLIVNSRKESLQAFKKPWAHEHEPVTTLLDAVQSIKPTVLIGTSGVGKTFTKEVIEAMASFNERPVIFSLSNPTSHSECTAEEAYNWSQGRAVFASGSPFDPVEYNGKIHVPGQSNNAYIFPGFGLGVVISGAVRVHEDM 563          

HSP 2 Score: 31.187 bits (69), Expect = 8.390e-76
Identity = 11/17 (64.71%), Postives = 15/17 (88.24%), Query Frame = 2
Query:  533 STQENFDKGLLYPPFKN 583
            +TQENF+KG ++PPF N
Sbjct:  575 ATQENFEKGSIFPPFTN 591          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 281.182 bits (718), Expect = 1.862e-75
Identity = 135/185 (72.97%), Postives = 156/185 (84.32%), Query Frame = 3
Query:    3 IALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMXXXXXXXXXGQVHRKTLTR 557
            IALE+S+++  PLEETRKKIWL DSKGLIVSSR ESLQHFKKPWAHEHE VK L++ V AIKP +LIGTSG G+TFTKEV+EAMAS NEKP+I +LSNPTSQSECTA+EAYTW++G+AIFASGSPFDP EY   VFVPGQ+NNAYIFPGLGLGL++SGAIRVHDDM         GQ+  + L +
Sbjct:  350 IALEMSRRSKTPLEETRKKIWLTDSKGLIVSSRKESLQHFKKPWAHEHEPVKGLLEVVKAIKPIVLIGTSGVGKTFTKEVIEAMASFNEKPLILALSNPTSQSECTAQEAYTWTKGKAIFASGSPFDPVEYEGKVFVPGQSNNAYIFPGLGLGLVISGAIRVHDDMLLAAAEALAGQIKEEYLAK 534          

HSP 2 Score: 22.7126 bits (47), Expect = 1.862e-75
Identity = 8/15 (53.33%), Postives = 10/15 (66.67%), Query Frame = 2
Query:  539 QENFDKGLLYPPFKN 583
            +E   KGL+YPP  N
Sbjct:  529 EEYLAKGLIYPPLSN 543          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 3.166e-75
Identity = 131/166 (78.92%), Postives = 147/166 (88.55%), Query Frame = 3
Query:    3 IALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            IALEISKQTN P+EE RKK+WLVDSKGLIV SR  SLQ FKKPWAHEHE +K L DAV +IKPT+LIGTSG GRTFTKE++EAM+S NE+PIIFSLSNPTS SECTAE+AYTWSQGR+IFASGSPF P EY    FVPGQ+NNAYIFPGLGLGL++SGA+RVH+DM
Sbjct:  395 IALEISKQTNAPIEECRKKVWLVDSKGLIVDSRKGSLQPFKKPWAHEHEPLKTLYDAVQSIKPTVLIGTSGVGRTFTKEIIEAMSSFNERPIIFSLSNPTSHSECTAEQAYTWSQGRSIFASGSPFAPVEYEGKTFVPGQSNNAYIFPGLGLGLVISGAVRVHEDM 560          

HSP 2 Score: 28.1054 bits (61), Expect = 3.166e-75
Identity = 9/15 (60.00%), Postives = 14/15 (93.33%), Query Frame = 2
Query:  533 STQENFDKGLLYPPF 577
            +TQ+NF+KG ++PPF
Sbjct:  572 ATQDNFEKGSIFPPF 586          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 2.057e-72
Identity = 130/166 (78.31%), Postives = 145/166 (87.35%), Query Frame = 3
Query:    3 IALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            IALE+SK+T  P+E+ RKKIWLVDSKGL+VSSR E+LQ FK PWAHEHE +  L+DAV AIKPT+LIGTSG+G+ FTKEVVEAMA++N KP+I +LSNPTSQSECTAEEAYTWSQG AIFASGSPFDP EY    FVPGQANNAYIFPG GLGLIM GAIRVHDDM
Sbjct:  344 IALEMSKKTKAPVEQMRKKIWLVDSKGLVVSSRKETLQQFKLPWAHEHEPITTLIDAVQAIKPTVLIGTSGKGKQFTKEVVEAMANINAKPLILALSNPTSQSECTAEEAYTWSQGHAIFASGSPFDPVEYEGRTFVPGQANNAYIFPGFGLGLIMCGAIRVHDDM 509          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAOX_DICDI (NADP-dependent malic enzyme OS=Dictyostelium discoideum GN=malA PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.452e-41
Identity = 85/166 (51.20%), Postives = 110/166 (66.27%), Query Frame = 3
Query:    9 LEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHES--VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            + +  +  +  EE RK  W VDSKGLI ++R + L   KK +A E  +  +K L++ V  +KPT +IG SG G +F++EV+E MA   EKPI+F+LSNPT+ +ECTAE+AY W+ GR IFASGSPF P EY    FVPGQ NN YIFPGLGL   +  A  V D M
Sbjct:  303 MSLFDEAGVSKEEARKSFWFVDSKGLITTTRGDELTSQKKQYAREDYTYQLKSLLEVVRDVKPTAIIGLSGIGGSFSQEVIEEMAKHVEKPIVFALSNPTTNAECTAEQAYQWTDGRCIFASGSPFKPVEYKGKTFVPGQGNNMYIFPGLGLAASVCEAKHVTDAM 468          
The following BLAST results are available for this feature:
BLAST of CF509674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOX_VITVI2.226e-7980.12NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOX_PHAVU4.939e-7983.13NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOC_FLAPR1.561e-7780.72NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_FLATR2.655e-7779.52NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_SOLLC4.936e-7680.12NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOC_ORYSJ8.390e-7677.11NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOX_POPTR1.862e-7572.97NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOC_MAIZE3.166e-7578.92NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOX_MESCR2.057e-7278.31NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOX_DICDI2.452e-4151.20NADP-dependent malic enzyme OS=Dictyostelium disco... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-182 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509674 ID=CF509674; Name=CF509674; organism=Citrus sinensis; type=EST; length=584bp
TCATAGCTCTTGAGATATCCAAACAGACAAATATGCCGCTAGAAGAGACT
CGCAAGAAGATTTGGCTTGTGGACTCAAAGGGATTGATCGTCAGTTCCCG
TTTAGAATCTCTCCAACATTTCAAAAAGCCGTGGGCTCATGAACATGAAT
CTGTTAAGGAACTAGTAGATGCCGTTAATGCAATCAAGCCAACAATTCTG
ATTGGAACATCAGGACAAGGTCGAACATTTACGAAAGAAGTTGTTGAGGC
TATGGCCTCCTTGAATGAGAAACCCATTATTTTTTCTCTTTCCAACCCAA
CTTCACAATCTGAATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGC
CGAGCCATTTTTGCAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGA
CAATGTTTTTGTGCCTGGCCAGGCAAATAATGCATACATTTTCCCTGGAC
TTGGTTTGGGGTTAATAATGTCTGGTGCAATCCGTGTTCACGATGACATG
CTTCTGGCAGCAGCGGAAGCATTGGCTGGACAAGTACACAGGAAAACTTT
GACAAGGGACTCCTTTACCCTCCATTTAAGAACA
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