CF509689
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF509689 vs. ExPASy Swiss-Prot
Match: IF41_WHEAT (Eukaryotic initiation factor iso-4F subunit p82-34 OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 277.715 bits (709), Expect = 3.909e-74 Identity = 146/239 (61.09%), Postives = 177/239 (74.06%), Query Frame = 1 Query: 4 ERVRYTREQLLQLKEVAQLTEDILKIKQEIESEFDGEGQSWGGRAENNNLQSQFQA------RYLEADNRDWRTRSTTSG-----QEKSLEANQEKMEFGAHEGQLNSQFASAQISTNQGA--GPAPALIKAEVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSDEPGGKDITFKRILLNHCQ 681 ERVRY+R+QLL L+++ +TE IL+++QEIE+E +G+ QSW N LQ+Q Q R+ E DNRDWR R+ +EKS + +E E G+ QF S++Q A GP PALIKA+VPWSARRGNLSEKDRVLKTVKGILNKLTPEKFD+LKGQL+DSGITT DILK VI LIF+KAV EPTFCPMYA LCS+LN+ LP FPS+EPGGK+ITFKR+LLN+CQ Sbjct: 62 ERVRYSRDQLLDLRKITDVTEQILRLQQEIEAELNGDDQSWVRNDSNVQLQTQAQPQVQAQNRFTETDNRDWRARTEKPPAPAVQEEKSWDNIREVKEQYNASGRQQEQFNRQDQSSSQKAQVGPPPALIKADVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDLLKGQLLDSGITTADILKDVISLIFEKAVFEPTFCPMYAQLCSELNDNLPTFPSEEPGGKEITFKRVLLNNCQ 300
BLAST of CF509689 vs. ExPASy Swiss-Prot
Match: C3H43_ORYSJ (Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa subsp. japonica GN=Os06g0520600 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.557e-41 Identity = 99/239 (41.42%), Postives = 143/239 (59.83%), Query Frame = 1 Query: 1 HERVRYTREQLLQLKEVAQLTEDILKIKQEIESEFDGEGQSWGGRAENNNLQSQFQARYLEADNRDWRTRSTTSGQEKSLEAN----QEKMEFGAHEGQLNSQFASAQISTNQG-------AGPAPA-LIKAEVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSDEPGGKDITFKRILLNHCQ 681 H+R+ YTR+QLLQL + ++ +DILK Q+I E +GE + G AE +++Q+ R+ D+RDW + S + E+ N +E G + + N S+ ++ P + LIKAEVP S +RG +S KD VLKT+K ILN +P+ FD+ KGQLI++ I++ DILK VI LIF+K V EP FC YA LC+ LN+ L PFP ++ ++ITFK+ L N CQ Sbjct: 235 HQRISYTRDQLLQLCQNVEVPKDILKFCQDINVELNGEDKISGFGAEKDHVQTPSYKRFDATDSRDWHSWSAQTNWEQKFWDNFSEAKEPYSLGWKQEKFNKPDQSSFHFDSKDQWLKFIKCTPCKSTLIKAEVPLSIQRGIISGKDEVLKTLKSILNTFSPKMFDLQKGQLIETRISSADILKDVINLIFEKVVAEPAFCSTYAQLCTYLNQNLTPFPPEDCDCEEITFKQALSNKCQ 473
BLAST of CF509689 vs. ExPASy Swiss-Prot
Match: IF4G1_ARATH (Eukaryotic translation initiation factor 4G OS=Arabidopsis thaliana GN=EIF4G PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.857e-16 Identity = 50/116 (43.10%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 337 PAPALIKAEVPWSARRGNLSEKDRVL-KTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSDEPGGKDITFKRILLNHCQ 681 P + KAE + G ++++++ + +K ILNKLTP+ F+ L Q+ I L GVI IFDKA++EPTFC MYA C L+ LP F G+ ITFKR+LLN CQ Sbjct: 1070 PMQVMHKAERKYQV--GTIADEEQAKQRQLKSILNKLTPQNFEKLFEQVKSVNIDNAVTLSGVISQIFDKALMEPTFCEMYADFCFHLSGALPDF---NENGEKITFKRLLLNKCQ 1180
BLAST of CF509689 vs. ExPASy Swiss-Prot
Match: IF4G2_RABIT (Eukaryotic translation initiation factor 4 gamma 2 OS=Oryctolagus cuniculus GN=EIF4G2 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15 Identity = 50/111 (45.05%), Postives = 69/111 (62.16%), Query Frame = 1 Query: 373 SARRGNLSEKDR---VLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNEKLP----PFPSDEPGGK-DITFKRILLNHCQ 681 SA + +EK+R + + V+GILNKLTPEKFD L +L++ G+ + ILKGVI LI DKA+ EP + +YA LC L E P P +PG K TF+R+L++ Q Sbjct: 62 SAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQPGQKQSTTFRRLLISKLQ 172
BLAST of CF509689 vs. ExPASy Swiss-Prot
Match: IF4G2_PONAB (Eukaryotic translation initiation factor 4 gamma 2 OS=Pongo abelii GN=EIF4G2 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15 Identity = 50/111 (45.05%), Postives = 69/111 (62.16%), Query Frame = 1 Query: 373 SARRGNLSEKDR---VLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNEKLP----PFPSDEPGGK-DITFKRILLNHCQ 681 SA + +EK+R + + V+GILNKLTPEKFD L +L++ G+ + ILKGVI LI DKA+ EP + +YA LC L E P P +PG K TF+R+L++ Q Sbjct: 62 SAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQPGQKQSTTFRRLLISKLQ 172
BLAST of CF509689 vs. ExPASy Swiss-Prot
Match: IF4G2_MOUSE (Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus GN=Eif4g2 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15 Identity = 50/111 (45.05%), Postives = 69/111 (62.16%), Query Frame = 1 Query: 373 SARRGNLSEKDR---VLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNEKLP----PFPSDEPGGK-DITFKRILLNHCQ 681 SA + +EK+R + + V+GILNKLTPEKFD L +L++ G+ + ILKGVI LI DKA+ EP + +YA LC L E P P +PG K TF+R+L++ Q Sbjct: 62 SAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQPGQKQSTTFRRLLISKLQ 172
BLAST of CF509689 vs. ExPASy Swiss-Prot
Match: IF4G2_HUMAN (Eukaryotic translation initiation factor 4 gamma 2 OS=Homo sapiens GN=EIF4G2 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15 Identity = 50/111 (45.05%), Postives = 69/111 (62.16%), Query Frame = 1 Query: 373 SARRGNLSEKDR---VLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNEKLP----PFPSDEPGGK-DITFKRILLNHCQ 681 SA + +EK+R + + V+GILNKLTPEKFD L +L++ G+ + ILKGVI LI DKA+ EP + +YA LC L E P P +PG K TF+R+L++ Q Sbjct: 62 SAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQPGQKQSTTFRRLLISKLQ 172
BLAST of CF509689 vs. ExPASy Swiss-Prot
Match: IF4G2_BOVIN (Eukaryotic translation initiation factor 4 gamma 2 OS=Bos taurus GN=EIF4G2 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15 Identity = 50/111 (45.05%), Postives = 69/111 (62.16%), Query Frame = 1 Query: 373 SARRGNLSEKDR---VLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNEKLP----PFPSDEPGGK-DITFKRILLNHCQ 681 SA + +EK+R + + V+GILNKLTPEKFD L +L++ G+ + ILKGVI LI DKA+ EP + +YA LC L E P P +PG K TF+R+L++ Q Sbjct: 62 SAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQPGQKQSTTFRRLLISKLQ 172
BLAST of CF509689 vs. ExPASy Swiss-Prot
Match: IF4G3_HUMAN (Eukaryotic translation initiation factor 4 gamma 3 OS=Homo sapiens GN=EIF4G3 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 8.573e-13 Identity = 47/119 (39.50%), Postives = 70/119 (58.82%), Query Frame = 1 Query: 349 LIKAEVPW--SARRGNLSEKDRVLKT------VKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSDEPGGKDITFKRILLNHCQ 681 L KAE W S +R + ++ +KT V+ ILNKLTP+ F+ L Q+ + T + LKGVI+L+F+KA+ EP+F YA +C L P +D+P G + F+++LLN CQ Sbjct: 726 LKKAENAWKPSQKRDSQADDPENIKTQELFRKVRSILNKLTPQMFNQLMKQVSGLTVDTEERLKGVIDLVFEKAIDEPSFSVAYANMCRCLVTLKVPM-ADKP-GNTVNFRKLLLNRCQ 842
BLAST of CF509689 vs. ExPASy Swiss-Prot
Match: IF4G3_MOUSE (Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus GN=Eif4g3 PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.120e-12 Identity = 47/119 (39.50%), Postives = 70/119 (58.82%), Query Frame = 1 Query: 349 LIKAEVPW--SARRGNLSEKDRVLKT------VKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSDEPGGKDITFKRILLNHCQ 681 L KAE W S +R + ++ +KT V+ ILNKLTP+ F+ L Q+ + T + LKGVI+L+F+KA+ EP+F YA +C L P +D+P G + F+++LLN CQ Sbjct: 721 LRKAENAWKPSQKRDSHADDPESIKTQELFRKVRSILNKLTPQMFNQLMKQVSALTVDTEERLKGVIDLVFEKAIDEPSFSVAYANMCRCLVTLKVPM-ADKP-GNTVNFRKLLLNRCQ 837 The following BLAST results are available for this feature:
BLAST of CF509689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509689 ID=CF509689; Name=CF509689; organism=Citrus sinensis; type=EST; length=682bpback to top |