CF509693
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509693 vs. ExPASy Swiss-Prot
Match: SYLC_SCHPO (Putative leucyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=SPAC26F1.13c PE=1 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 1.456e-49 Identity = 86/144 (59.72%), Postives = 113/144 (78.47%), Query Frame = 3 Query: 96 GLGLCIPWDPQFLVESLSDSTIYMAYYTVAHMLHKGDMYGSTTGS--IEPGQMTDEVWEFIFCGGPYPESSNIPSSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSQRHWPRGFRCNGHIMLNSEKMSKSTGN 521 GLG +PWDPQFLVESL+DSTIYMAYYT+ H+LH D+YG G+ I+P QMT EVW+ +F P P++++I L R+ +EF+Y+YPFD+R SGKDL+ NHLTFC+Y HTAI +++WP+G R NGH+++N EKMSKSTGN Sbjct: 602 GLGTRLPWDPQFLVESLTDSTIYMAYYTICHLLHS-DVYGKVPGALNIKPEQMTPEVWDHVFRQAPKPKNTSISDEALARLCREFQYFYPFDIRASGKDLVPNHLTFCLYTHTAIFDEKYWPKGIRANGHLLMNGEKMSKSTGN 744
BLAST of CF509693 vs. ExPASy Swiss-Prot
Match: SYLC_NEUCR (Leucyl-tRNA synthetase, cytoplasmic OS=Neurospora crassa GN=leu-6 PE=3 SV=2) HSP 1 Score: 180.259 bits (456), Expect = 1.996e-49 Identity = 86/148 (58.11%), Postives = 107/148 (72.30%), Query Frame = 3 Query: 96 GLGLCIPWDPQFLVESLSDSTIYMAYYTVAHMLHKGDMYGSTTG--SIEPGQMTDEVWEFIFCGGPYPE----SSNIPSSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSQRHWPRGFRCNGHIMLNSEKMSKSTGN 521 GLG +PWDP FLVESLSDST+YMAYYTVAH LH+ D++G G +I QM DEVW++IFC + S IP L+ M++EF+Y+YP D+RVSGKDLI NHLTF +YNH A+ + +WP+ R NGH+ LN EKMSKSTGN Sbjct: 618 GLGSKLPWDPNFLVESLSDSTVYMAYYTVAHWLHR-DLFGREKGKGNIGADQMIDEVWDYIFCRTELSDHLVTKSGIPKETLDSMRREFQYFYPLDIRVSGKDLIPNHLTFWLYNHIALFPREYWPKSVRANGHLQLNGEKMSKSTGN 764 HSP 2 Score: 36.1946 bits (82), Expect = 1.996e-49 Identity = 11/26 (42.31%), Postives = 18/26 (69.23%), Query Frame = 1 Query: 10 MNLYHDENRHGFEHTLGWLNQWACLK 87 +N Y+ + +H F+ +GWL QWAC + Sbjct: 590 INTYYADTQHAFKGVIGWLKQWACAR 615
BLAST of CF509693 vs. ExPASy Swiss-Prot
Match: SYLC_DICDI (Leucyl-tRNA synthetase, cytoplasmic OS=Dictyostelium discoideum GN=leuS PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 1.560e-43 Identity = 83/144 (57.64%), Postives = 102/144 (70.83%), Query Frame = 3 Query: 96 GLGLCIPWDPQFLVESLSDSTIYMAYYTVAHMLHKGDMYGSTTGS--IEPGQMTDEVWEFIFCGGPYPESSNIPSSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSQRHWPRGFRCNGHIMLNSEKMSKSTGN 521 GLG +PWD +FL+ESLSDSTIYMA+YTVAH+L +GD+ GS GS I P QMT W+++ G PYPE + L +K+EF YWYP D+RVSG DLIQNHLTF +Y H AI ++ P+ R NG + LN EKMSKSTGN Sbjct: 576 GLGTHLPWDEKFLIESLSDSTIYMAFYTVAHLL-QGDVNGSKPGSAGITPKQMTSACWDYVLMGKPYPEGCEVSEEKLKELKKEFTYWYPVDIRVSGADLIQNHLTFFLYTHAAIFEKKFQPKSIRANGFVNLNGEKMSKSTGN 718
BLAST of CF509693 vs. ExPASy Swiss-Prot
Match: SYLC_MOUSE (Leucyl-tRNA synthetase, cytoplasmic OS=Mus musculus GN=Lars PE=2 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 5.927e-43 Identity = 84/147 (57.14%), Postives = 108/147 (73.47%), Query Frame = 3 Query: 96 GLGLCIPWDPQFLVESLSDSTIYMAYYTVAHMLHKGDMYGSTTG--SIEPGQMTDEVWEFIFC-GGPYPESSNIPSSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSQR--HWPRGFRCNGHIMLNSEKMSKSTGN 521 GLG +PWD Q+L+ESLSDSTIYMA+YTVAH+L GD+ G I P QMT +VW+++F P+P++ IP L+++KQEFE+WYP DLR SGKDLI NHL++ IYNH A+ ++ WP R NGH++LNSEKMSKSTGN Sbjct: 580 GLGTRLPWDEQWLIESLSDSTIYMAFYTVAHLLQGGDLNGQAESPLGIRPQQMTKDVWDYVFFKDAPFPKTQ-IPKEKLDQLKQEFEFWYPVDLRASGKDLIPNHLSYYIYNHVAMWPEQSDKWPVSVRANGHLLLNSEKMSKSTGN 725
BLAST of CF509693 vs. ExPASy Swiss-Prot
Match: SYLC_PONAB (Leucyl-tRNA synthetase, cytoplasmic OS=Pongo abelii GN=LARS PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 1.724e-42 Identity = 82/147 (55.78%), Postives = 109/147 (74.15%), Query Frame = 3 Query: 96 GLGLCIPWDPQFLVESLSDSTIYMAYYTVAHMLHKGDMYGSTTG--SIEPGQMTDEVWEFIFCG-GPYPESSNIPSSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSQR--HWPRGFRCNGHIMLNSEKMSKSTGN 521 GLG +PWD Q+L+ESLSDSTIYMA+YTVAH+L G+++G I P QMT EVW+++F P+P++ I L+++KQEFE+WYP DLRVSGKDL+ NHL++ +YNH A+ ++ WP R NGH++LNSEKMSKSTGN Sbjct: 578 GLGTHLPWDEQWLIESLSDSTIYMAFYTVAHLLQGGNLHGQAESPLGIRPQQMTKEVWDYVFFKEAPFPKTQ-IAKEKLDQLKQEFEFWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVRANGHLLLNSEKMSKSTGN 723
BLAST of CF509693 vs. ExPASy Swiss-Prot
Match: SYLC_HUMAN (Leucyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=LARS PE=1 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 1.724e-42 Identity = 82/147 (55.78%), Postives = 109/147 (74.15%), Query Frame = 3 Query: 96 GLGLCIPWDPQFLVESLSDSTIYMAYYTVAHMLHKGDMYGSTTG--SIEPGQMTDEVWEFIFCG-GPYPESSNIPSSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSQR--HWPRGFRCNGHIMLNSEKMSKSTGN 521 GLG +PWD Q+L+ESLSDSTIYMA+YTVAH+L G+++G I P QMT EVW+++F P+P++ I L+++KQEFE+WYP DLRVSGKDL+ NHL++ +YNH A+ ++ WP R NGH++LNSEKMSKSTGN Sbjct: 578 GLGTHLPWDEQWLIESLSDSTIYMAFYTVAHLLQGGNLHGQAESPLGIRPQQMTKEVWDYVFFKEAPFPKTQ-IAKEKLDQLKQEFEFWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVRANGHLLLNSEKMSKSTGN 723
BLAST of CF509693 vs. ExPASy Swiss-Prot
Match: SYLC_YEAST (Leucyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=CDC60 PE=1 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 5.017e-42 Identity = 80/144 (55.56%), Postives = 107/144 (74.31%), Query Frame = 3 Query: 96 GLGLCIPWDPQFLVESLSDSTIYMAYYTVAHMLHKGDMYGSTTG--SIEPGQMTDEVWEFIFCGGPYPESSNIPSSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSQRHWPRGFRCNGHIMLNSEKMSKSTGN 521 GLG +PWD ++LVESLSDSTIY ++YT+AH+L K D YG+ G I QMTDEV+++IF +++NIP L ++++EFEY+YP D+ +SGKDLI NHLTF IY H A+ ++ WP+G R NGH+MLN+ KMSKSTGN Sbjct: 594 GLGTRLPWDEKYLVESLSDSTIYQSFYTIAHLLFK-DYYGNEIGPLGISADQMTDEVFDYIFQHQDDVKNTNIPLPALQKLRREFEYFYPLDVSISGKDLIPNHLTFFIYTHVALFPKKFWPKGIRANGHLMLNNSKMSKSTGN 736
BLAST of CF509693 vs. ExPASy Swiss-Prot
Match: SYLC_CAEEL (Leucyl-tRNA synthetase OS=Caenorhabditis elegans GN=lrs-1 PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 2.753e-40 Identity = 81/148 (54.73%), Postives = 102/148 (68.92%), Query Frame = 3 Query: 96 GLGLCIPWDPQFLVESLSDSTIYMAYYTVAHMLHKGDMYGSTTG--SIEPGQMTDEVWEFIFCGGPYPESSNIP--SSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAI--MSQRHWPRGFRCNGHIMLNSEKMSKSTGN 521 GLG +PWD Q+L+ESLSDSTIY AYYTVAH+L +G GS G I+ QMTD W ++F G Y +S +P L +++EF YWYP D+R SGKDLI NHLT+ ++NH AI WP+G R NGH++LN+EKMSKSTGN Sbjct: 579 GLGTKLPWDTQYLIESLSDSTIYNAYYTVAHLLQQGAFDGSVVGPAGIKADQMTDASWSYVFLGEIY-DSKTMPVEEEKLKSLRKEFMYWYPIDMRASGKDLIGNHLTYLLFNHAAIWPTDTSKWPKGIRANGHLLLNNEKMSKSTGN 725
BLAST of CF509693 vs. ExPASy Swiss-Prot
Match: SYL_PYRHO (Leucyl-tRNA synthetase OS=Pyrococcus horikoshii GN=leuS PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.414e-36 Identity = 72/151 (47.68%), Postives = 100/151 (66.23%), Query Frame = 3 Query: 90 RLGLGLCIPWDPQFLVESLSDSTIYMAYYTVAHMLHKGDMYGSTTGSIEPGQMTDEVWEFIFCGG-------PYPESSNIPSSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSQRHWPRGFRCNGHIMLNSEKMSKSTGN 521 ++GLG +PWDP++++ESLSDSTIYMAYYT++ ++K G ++P ++T E +++IF + + IP+ I++ MK+EFEYWYP D R SGKDLI NHLTF I+NH AI + HWP+G NG L +KMSKS GN Sbjct: 511 KIGLGTPLPWDPEWVIESLSDSTIYMAYYTISRHINKLRQ----EGKLDPEKLTPEFFDYIFLEEFSEDKEKELEKKTGIPAEIIHEMKEEFEYWYPLDWRCSGKDLIPNHLTFFIFNHVAIFREEHWPKGIAVNGFGTLEGQKMSKSKGN 657
BLAST of CF509693 vs. ExPASy Swiss-Prot
Match: SYL_PYRAB (Leucyl-tRNA synthetase OS=Pyrococcus abyssi GN=leuS PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 5.373e-36 Identity = 72/151 (47.68%), Postives = 100/151 (66.23%), Query Frame = 3 Query: 90 RLGLGLCIPWDPQFLVESLSDSTIYMAYYTVAHMLHKGDMYGSTTGSIEPGQMTDEVWEFIFCGGPYPE-------SSNIPSSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSQRHWPRGFRCNGHIMLNSEKMSKSTGN 521 ++GLG +PWDP++++ESLSDSTIYMAYYT++ +++ G ++P ++T E +++IF E + IP+ I++ MK+EFEYWYP D R SGKDLI NHLTF I+NH AI + HWP+G NG L +KMSKS GN Sbjct: 511 KVGLGTPLPWDPEWVIESLSDSTIYMAYYTISRHINRL----REEGRLDPEKLTPEFFDYIFLEEFSEEREKELEKKTGIPAEIIHEMKEEFEYWYPLDWRCSGKDLIPNHLTFFIFNHVAIFREEHWPKGIAVNGFGTLEGQKMSKSKGN 657 The following BLAST results are available for this feature:
BLAST of CF509693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509693 ID=CF509693; Name=CF509693; organism=Citrus sinensis; type=EST; length=522bpback to top |