CF509708

Overview
NameCF509708
Unique NameCF509708
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length405
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF509708 vs. ExPASy Swiss-Prot
Match: MIOX_ORYSJ (Probable inositol oxygenase OS=Oryza sativa subsp. japonica GN=Os06g0561000 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.086e-17
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = -2 
Query:  267 ENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 401
            ENLKWL  F+KYDLYSKS  RIDVEKVKPYY+SLIEKYFPAKL+W
Sbjct:  264 ENLKWLRVFNKYDLYSKSNERIDVEKVKPYYMSLIEKYFPAKLRW 308
[Close]
BLAST of CF509708 vs. ExPASy Swiss-Prot
Match: MIOX1_ARATH (Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MIOX1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.998e-16
Identity = 35/45 (77.78%), Postives = 42/45 (93.33%), Query Frame = -2 
Query:  267 ENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 401
            EN+KWL+ F+KYDLYSKSKVR++VE+VKPYYLSL  KYFP+KLKW
Sbjct:  267 ENMKWLKVFNKYDLYSKSKVRVNVEEVKPYYLSLTNKYFPSKLKW 311
[Close]
BLAST of CF509708 vs. ExPASy Swiss-Prot
Match: MIOX4_ARATH (Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MIOX4 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.834e-16
Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = -2 
Query:  267 ENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 401
            ENLKWL  F+KYDLYSKSKV +DVEKVKPYY+SLI+KYFP  L+W
Sbjct:  273 ENLKWLHVFNKYDLYSKSKVHVDVEKVKPYYMSLIKKYFPENLRW 317
[Close]
BLAST of CF509708 vs. ExPASy Swiss-Prot
Match: MIOX2_ARATH (Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MIOX2 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.336e-15
Identity = 35/45 (77.78%), Postives = 41/45 (91.11%), Query Frame = -2 
Query:  267 ENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 401
            ++LKWL  F+KYDLYSKSKV +DVE+VKPYY+SLI KYFPAKLKW
Sbjct:  273 DDLKWLHVFNKYDLYSKSKVLVDVEQVKPYYISLINKYFPAKLKW 317
[Close]
BLAST of CF509708 vs. ExPASy Swiss-Prot
Match: MIOX5_ARATH (Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MIOX5 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.977e-15
Identity = 34/45 (75.56%), Postives = 40/45 (88.89%), Query Frame = -2 
Query:  267 ENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 401
            ENLKWL  F+KYDLYSKSKV ++VEKVKPYY+SLI+KYFP  L+W
Sbjct:  270 ENLKWLHVFNKYDLYSKSKVHVNVEKVKPYYMSLIKKYFPENLRW 314
The following BLAST results are available for this feature:
BLAST of CF509708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
MIOX_ORYSJ7.086e-1784.44Probable inositol oxygenase OS=Oryza sativa subsp.... [more]
MIOX1_ARATH5.998e-1677.78Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MI... [more]
MIOX4_ARATH7.834e-1677.78Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MI... [more]
MIOX2_ARATH1.336e-1577.78Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MI... [more]
MIOX5_ARATH2.977e-1575.56Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MI... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-216 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509708 ID=CF509708; Name=CF509708; organism=Citrus sinensis; type=EST; length=405bp
TTTTTTTTGCAGGAGACTAACAAATAGAACTCTTTTATTAGAAACAAACA
GATACCAAATGCATCTTACACAAACCATAAAATGCAACATTATTATTTTT
TCTTACAAGAACTTCAAACTAGATAGATTAGCCATTTAACAAAGCAACTA
TGATGACCTCTCAAAAACTAATTCATCATCATATTCATTAGCTAACTTCG
CTGTCTGCTGACCACATCAGTACCCATATTGAGCCATCGCCAGTTTCAGA
AAACTCTCGAGTCTCACCATTTTAGCTTCGCCGGGAAATACTTTTCAATG
AGGGAGAGATAGTAAGGCTTGACCTTTTCCACATCTATCCGGACTTTGCT
CTTGCTATAAAGGTCATATTTGCTGAATGTTTCAAGCCACTTCAGATTTT
CTACA
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