CF509710
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF509710 vs. ExPASy Swiss-Prot
Match: TRPB1_ARATH (Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana GN=TSB1 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.152e-36 Identity = 75/101 (74.26%), Postives = 80/101 (79.21%), Query Frame = 3 Query: 3 QRPDVXXXXXXXXXXXVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 305 QRPD VPETLM+ALSELESA + LA D DFQ EL+GIL+DYVGRE+PLYFAERLTEHYRR NG GP IYLKREDLNHTGAHKINNAV QA Sbjct: 73 QRPDSFGRFGKFGGKYVPETLMHALSELESAFYALATDDDFQRELAGILKDYVGRESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQA 173
BLAST of CF509710 vs. ExPASy Swiss-Prot
Match: TRPB2_MAIZE (Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea mays GN=TSB2 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 3.339e-35 Identity = 72/101 (71.29%), Postives = 80/101 (79.21%), Query Frame = 3 Query: 3 QRPDVXXXXXXXXXXXVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 305 QRPD VPETLM+AL+ELESA H LA D +FQ+EL GIL+DYVGRE+PLYFAERLTEHY+R +G GP IYLKREDLNHTGAHKINNAV QA Sbjct: 46 QRPDAMGRFGRFGGKYVPETLMHALTELESAFHALATDDEFQKELDGILKDYVGRESPLYFAERLTEHYKRADGTGPLIYLKREDLNHTGAHKINNAVAQA 146
BLAST of CF509710 vs. ExPASy Swiss-Prot
Match: TRPB_CAMAC (Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata GN=TSB PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 4.361e-35 Identity = 72/101 (71.29%), Postives = 79/101 (78.22%), Query Frame = 3 Query: 3 QRPDVXXXXXXXXXXXVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 305 QRPD VPETLMYAL+ELESA L+ D+ FQ+EL GIL+DYVGRE+PLYFAERLT HY+RPNG GP IYLKREDLNHTGAHKINNAV QA Sbjct: 69 QRPDSFGRFGKFGGKYVPETLMYALTELESAFRSLSGDQVFQKELDGILKDYVGRESPLYFAERLTLHYKRPNGEGPEIYLKREDLNHTGAHKINNAVAQA 169
BLAST of CF509710 vs. ExPASy Swiss-Prot
Match: TRBP2_ARATH (Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana GN=TSB2 PE=2 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 4.361e-35 Identity = 73/101 (72.28%), Postives = 79/101 (78.22%), Query Frame = 3 Query: 3 QRPDVXXXXXXXXXXXVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 305 QRPD VPETLM+ALSELE+A + LA D DFQ EL+ IL+DYVGRE+PLYFAERLTEHYRR NG GP IYLKREDLNHTGAHKINNAV QA Sbjct: 78 QRPDSFGRFGKFGGKYVPETLMHALSELETAFYSLATDEDFQRELAEILKDYVGRESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQA 178
BLAST of CF509710 vs. ExPASy Swiss-Prot
Match: TRPB1_MAIZE (Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays GN=TSB1 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 9.094e-33 Identity = 66/85 (77.65%), Postives = 75/85 (88.24%), Query Frame = 3 Query: 51 VPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 305 VPETLM+AL+ELE+A H LA D +FQ+EL GIL+DYVGRE+PLYFAERLTEHY+R +G GP IYLKREDLNH GAHKINNAV QA Sbjct: 8 VPETLMHALTELENAFHALATDDEFQKELDGILKDYVGRESPLYFAERLTEHYKRADGTGPLIYLKREDLNHRGAHKINNAVAQA 92
BLAST of CF509710 vs. ExPASy Swiss-Prot
Match: TRPB_ANAVT (Tryptophan synthase beta chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=trpB PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 9.411e-30 Identity = 65/100 (65.00%), Postives = 71/100 (71.00%), Query Frame = 3 Query: 3 QRPDVXXXXXXXXXXXVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 302 Q PD+ VPETLM AL+ELE+A K D FQ EL +LRDYVGR TPLYFAERLT HY RP+G G IYLKREDLNHTGAHKINNA+GQ Sbjct: 15 QVPDIQGRFGRFGGKYVPETLMPALAELETAYQKYRHDPGFQAELQQLLRDYVGRATPLYFAERLTAHYARPDGTGAQIYLKREDLNHTGAHKINNALGQ 114
BLAST of CF509710 vs. ExPASy Swiss-Prot
Match: TRPB_TRIEI (Tryptophan synthase beta chain OS=Trichodesmium erythraeum (strain IMS101) GN=trpB PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.229e-29 Identity = 63/101 (62.38%), Postives = 74/101 (73.27%), Query Frame = 3 Query: 3 QRPDVXXXXXXXXXXXVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQA 305 Q+PD VPETLM AL +LE+A K + D F++EL +LRDYVGR +PLYFAERLT HY +P+G GP IYLKREDLNHTGAHKINNA+GQA Sbjct: 12 QQPDSLGRFGKFGGKYVPETLMPALLQLETACKKYSQDPTFKQELQQLLRDYVGRPSPLYFAERLTAHYTKPDGTGPQIYLKREDLNHTGAHKINNALGQA 112
BLAST of CF509710 vs. ExPASy Swiss-Prot
Match: TRPB2_ANASP (Tryptophan synthase beta chain 2 OS=Anabaena sp. (strain PCC 7120) GN=trpB2 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.605e-29 Identity = 64/100 (64.00%), Postives = 72/100 (72.00%), Query Frame = 3 Query: 3 QRPDVXXXXXXXXXXXVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 302 Q PD+ VPETLM AL+ELE+A + +D FQ EL +LRDYVGR TPLYFAERLT HY RP+G G IYLKREDLNHTGAHKINNA+GQ Sbjct: 15 QVPDIQGRFGRFGGKYVPETLMPALAELETAYQQYRNDPGFQAELQQLLRDYVGRATPLYFAERLTAHYARPDGTGAQIYLKREDLNHTGAHKINNALGQ 114
BLAST of CF509710 vs. ExPASy Swiss-Prot
Match: TRPB1_ANASP (Tryptophan synthase beta chain 1 OS=Anabaena sp. (strain PCC 7120) GN=trpB1 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 2.096e-29 Identity = 63/99 (63.64%), Postives = 70/99 (70.71%), Query Frame = 3 Query: 6 RPDVXXXXXXXXXXXVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 302 RPD VPETLM AL ELE+A K DD +Q EL +LRDYVGR +PLYFAERLTE+Y RP+G G IYLKREDLNHTGAHKINNA+ Q Sbjct: 13 RPDALGRFGKFGGKYVPETLMPALGELETAYQKYRDDASYQTELQNLLRDYVGRPSPLYFAERLTEYYARPDGTGAQIYLKREDLNHTGAHKINNALAQ 111
BLAST of CF509710 vs. ExPASy Swiss-Prot
Match: TRPB_SYNY3 (Tryptophan synthase beta chain OS=Synechocystis sp. (strain PCC 6803) GN=trpB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 4.670e-29 Identity = 62/100 (62.00%), Postives = 73/100 (73.00%), Query Frame = 3 Query: 3 QRPDVXXXXXXXXXXXVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQ 302 Q PD VPETLM AL+ELE A ++ + FQEEL+G+L+DYVGR +PLYFAERL+ HY RP+G P IYLKREDLNHTGAHKINNA+GQ Sbjct: 13 QYPDALGRFGNYGGKYVPETLMPALTELEEAYYRYRAESSFQEELAGLLKDYVGRSSPLYFAERLSAHYARPDGTYPLIYLKREDLNHTGAHKINNALGQ 112 The following BLAST results are available for this feature:
BLAST of CF509710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 380
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509710 ID=CF509710; Name=CF509710; organism=Citrus sinensis; type=EST; length=305bpback to top |