CF509720
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF509720 vs. ExPASy Swiss-Prot
Match: RGLG2_ARATH (E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana GN=RGLG2 PE=1 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.398e-64 Identity = 118/156 (75.64%), Postives = 137/156 (87.82%), Query Frame = 3 Query: 258 YYATPSQSYSGRAPESTRKLERKYSKIDDNYHSLEQVTDALARAGLESSNLIVGIDFTKSNEWTGARSFQRRSLHHIGDDQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAP 725 Y A PSQSY ++ ++LERKYSKI D+Y SLEQVT+ALARAGLESSNLIVGIDFTKSNEWTGARSF R+SLH IG NPYEQAI+IIG+TL++FDEDNLIPC+GFGDASTHDQ+VFSF +++FCNGFEEVL RY+E+VP L+LAGPTSFAP Sbjct: 76 YSAPPSQSYGS---DNKKRLERKYSKISDDYSSLEQVTEALARAGLESSNLIVGIDFTKSNEWTGARSFNRKSLHFIGSSPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTHDQDVFSFNSEDRFCNGFEEVLSRYKEIVPQLKLAGPTSFAP 228
BLAST of CF509720 vs. ExPASy Swiss-Prot
Match: RGLG1_ARATH (E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana GN=RGLG1 PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.483e-62 Identity = 113/156 (72.44%), Postives = 132/156 (84.62%), Query Frame = 3 Query: 258 YYATPSQSYSGRAPESTRKLERKYSKIDDNYHSLEQVTDALARAGLESSNLIVGIDFTKSNEWTGARSFQRRSLHHIGDDQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAP 725 Y PSQS +K +R+YSKI DNY SL QV++AL RAGLESSNLIVGIDFTKSNEWTGA+SF R+SLHH+ + NPYEQAI+IIG+TL++FDEDNLIPC+GFGDASTHDQ+VFSFYP+ +FCNGFEEVL RYRE+VP L+LAGPTSFAP Sbjct: 111 YPPPPSQSQVA----DRKKFDRRYSKISDNYSSLLQVSEALGRAGLESSNLIVGIDFTKSNEWTGAKSFNRKSLHHLSNTPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTHDQDVFSFYPEGRFCNGFEEVLARYREIVPQLKLAGPTSFAP 262
BLAST of CF509720 vs. ExPASy Swiss-Prot
Match: CPNA2_CAEEL (Copine domain-containing protein 2 OS=Caenorhabditis elegans GN=cpna-2 PE=2 SV=3) HSP 1 Score: 134.806 bits (338), Expect = 4.540e-31 Identity = 67/131 (51.15%), Postives = 88/131 (67.18%), Query Frame = 3 Query: 345 NYHSLEQVTDALARAGLESSNLIVGIDFTKSNEWTGARSFQRRSLHHIGD-DQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSF---YPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAP 725 ++ +L+ + A+ AGLE SNLI GID+TKSN + G R+F +R LH I + NPY+Q I I+GKTLSSFD D IP +GFGD D +F+ Y EK CNGFEEVLR Y E+ P + ++GPT+F P Sbjct: 7298 HFKTLDDIVKAIKHAGLEYSNLIFGIDYTKSNFYQGERTFDKRPLHTIDPAEMNPYQQVIQIVGKTLSSFDADGQIPAYGFGDEEFTDHGIFNIAERYDLEKDCNGFEEVLRVYNEVTPTIEMSGPTNFVP 7428
BLAST of CF509720 vs. ExPASy Swiss-Prot
Match: CPNE1_HUMAN (Copine-1 OS=Homo sapiens GN=CPNE1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12 Identity = 45/158 (28.48%), Postives = 74/158 (46.84%), Query Frame = 3 Query: 270 PSQSYSGRAPESTRKLERKYSKIDDNYHSLEQVTDALARAGLESSNLIVGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAP 725 P + ++ +++ + K +++ Y L+ V N VG+DFT SN + SLH++ N Y A+ +G + +D D L P FGFG D +V +F P +C G + ++ YR+ +P +RL GPT+FAP Sbjct: 246 PEKQQKKKSYKNSGTIRVKICRVETEYSFLDYVMGGC------QINFTVGVDFTGSNGDPSSPD----SLHYLSPTGVNEYLMALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQALPQVRLYGPTNFAP 393
BLAST of CF509720 vs. ExPASy Swiss-Prot
Match: CPNE3_MOUSE (Copine-3 OS=Mus musculus GN=Cpne3 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 6.165e-12 Identity = 40/113 (35.40%), Postives = 58/113 (51.33%), Query Frame = 3 Query: 405 NLIVGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAP 725 N VG+DFT SN + SLH+I + N Y AI +G + +D D + P FGFG +V +F P +CNG + ++ YR +P +RL GPT+F+P Sbjct: 291 NFTVGVDFTGSNGDPSSPD----SLHYISPNGVNEYLTAIWSVGLVIQDYDADKMFPAFGFGAQVPPQWQVSHEFPMNFNPSNPYCNGIQGIVEAYRTCLPQIRLYGPTNFSP 399
BLAST of CF509720 vs. ExPASy Swiss-Prot
Match: CPNE1_MOUSE (Copine-1 OS=Mus musculus GN=Cpne1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.165e-12 Identity = 49/165 (29.70%), Postives = 75/165 (45.45%), Query Frame = 3 Query: 249 PQQYYATPSQSYSGRAPESTRKLERKYSKIDDNYHSLEQVTDALARAGLESSNLIVGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAP 725 P++ + SG T ++E +YS +D G + N VG+DFT SN + SLH++ N Y A+ +G + +D D L P FGFG D +V +F P +C G + ++ YR+ +P +RL GPT+FAP Sbjct: 245 PEKQQRKKNYRNSGTVRVKTCRVETEYSFLD------------YVMGGCQI-NFTVGVDFTGSNGDPSSPD----SLHYLSPTGVNEYLTALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQALPQVRLYGPTNFAP 392
BLAST of CF509720 vs. ExPASy Swiss-Prot
Match: CPNE3_PONAB (Copine-3 OS=Pongo abelii GN=CPNE3 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.052e-11 Identity = 38/113 (33.63%), Postives = 59/113 (52.21%), Query Frame = 3 Query: 405 NLIVGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAP 725 N VG+DFT SN+ + SLH+I + N Y A+ +G + +D D + P FGFG +V +F P +CNG + ++ YR +P ++L GPT+F+P Sbjct: 291 NFTVGVDFTGSNDDPRSPD----SLHYISPNGVNEYLTALWSVGLVIQDYDADKMFPAFGFGAQIPPQWQVSHEFPMNFNPSNPYCNGIQGIVEAYRSCLPQIKLYGPTNFSP 399
BLAST of CF509720 vs. ExPASy Swiss-Prot
Match: CPNE2_MOUSE (Copine-2 OS=Mus musculus GN=Cpne2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11 Identity = 39/110 (35.45%), Postives = 55/110 (50.00%), Query Frame = 3 Query: 414 VGIDFTKSNEWTGARSFQRRSLHHIGD-DQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAP 725 VGIDFT SN SLH+I N Y AI +G+ + +D D + P GFG D +V +F P FC+G + + + Y +PH+R GPT+F+P Sbjct: 310 VGIDFTASN----GNPLDPSSLHYINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTNPFCSGVDGIAQAYSACLPHIRFYGPTNFSP 415
BLAST of CF509720 vs. ExPASy Swiss-Prot
Match: CPNE2_HUMAN (Copine-2 OS=Homo sapiens GN=CPNE2 PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11 Identity = 39/110 (35.45%), Postives = 55/110 (50.00%), Query Frame = 3 Query: 414 VGIDFTKSNEWTGARSFQRRSLHHIGD-DQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAP 725 VGIDFT SN SLH+I N Y AI +G+ + +D D + P GFG D +V +F P FC+G + + + Y +PH+R GPT+F+P Sbjct: 310 VGIDFTASN----GNPLDPSSLHYINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTNPFCSGVDGIAQAYSACLPHIRFYGPTNFSP 415
BLAST of CF509720 vs. ExPASy Swiss-Prot
Match: CPNE3_HUMAN (Copine-3 OS=Homo sapiens GN=CPNE3 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.059e-11 Identity = 38/113 (33.63%), Postives = 58/113 (51.33%), Query Frame = 3 Query: 405 NLIVGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAP 725 N VG+DFT SN + SLH+I + N Y A+ +G + +D D + P FGFG +V +F P +CNG + ++ YR +P ++L GPT+F+P Sbjct: 291 NFTVGVDFTGSNGDPRSPD----SLHYISPNGVNEYLTALWSVGLVIQDYDADKMFPAFGFGAQIPPQWQVSHEFPMNFNPSNPYCNGIQGIVEAYRSCLPQIKLYGPTNFSP 399 The following BLAST results are available for this feature:
BLAST of CF509720 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509720 ID=CF509720; Name=CF509720; organism=Citrus sinensis; type=EST; length=726bpback to top |