CF509747

Overview
NameCF509747
Unique NameCF509747
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length550
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509747 vs. ExPASy Swiss-Prot
Match: BIP5_TOBAC (Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1)

HSP 1 Score: 357.451 bits (916), Expect = 2.517e-98
Identity = 180/183 (98.36%), Postives = 182/183 (99.45%), Query Frame = 2
Query:    2 KRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDC 550
            KRALSSQHQVRVEIESLFDG+DFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTV+I VFEGERSLTKDC
Sbjct:  303 KRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVTISVFEGERSLTKDC 485          
BLAST of CF509747 vs. ExPASy Swiss-Prot
Match: BIP4_TOBAC (Luminal-binding protein 4 OS=Nicotiana tabacum GN=BIP4 PE=2 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 7.324e-98
Identity = 179/183 (97.81%), Postives = 182/183 (99.45%), Query Frame = 2
Query:    2 KRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDC 550
            KRALSSQHQVRVEIESLFDG+DFSEPLTRARFEELNNDLFRKTMGPVKKAM+DAGLEK QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTV+IQVFEGERSLTKDC
Sbjct:  304 KRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLEKTQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVTIQVFEGERSLTKDC 486          
BLAST of CF509747 vs. ExPASy Swiss-Prot
Match: BIP1_ARATH (Luminal-binding protein 1 OS=Arabidopsis thaliana GN=At5g28540 PE=1 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 4.747e-97
Identity = 177/183 (96.72%), Postives = 183/183 (100.00%), Query Frame = 2
Query:    2 KRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDC 550
            KRALSSQHQVRVEIESLFDG+DFSEPLTRARFEELNNDLFRKTMGPVKKAM+DAGL+K+QIDEIVLVGGSTRIPKVQQLLKD+F+GKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDC
Sbjct:  302 KRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDC 484          
BLAST of CF509747 vs. ExPASy Swiss-Prot
Match: BIP_SOLLC (Luminal-binding protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 1.058e-96
Identity = 177/183 (96.72%), Postives = 181/183 (98.91%), Query Frame = 2
Query:    2 KRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDC 550
            KR+LSSQHQVRVEIESLFDG DFSEPLTRARFEELNNDLFRKTMGPVKKAM+DAGL+KNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEP+KGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTK IPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDC
Sbjct:  303 KRSLSSQHQVRVEIESLFDGTDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPSKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKFIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDC 485          
BLAST of CF509747 vs. ExPASy Swiss-Prot
Match: BIP2_ARATH (Luminal-binding protein 2 OS=Arabidopsis thaliana GN=At5g42020 PE=1 SV=2)

HSP 1 Score: 350.903 bits (899), Expect = 2.356e-96
Identity = 176/183 (96.17%), Postives = 182/183 (99.45%), Query Frame = 2
Query:    2 KRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDC 550
            KRALSSQHQVRVEIESLFDG+D SEPLTRARFEELNNDLFRKTMGPVKKAM+DAGL+K+QIDEIVLVGGSTRIPKVQQLLKD+F+GKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDC
Sbjct:  302 KRALSSQHQVRVEIESLFDGVDLSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDC 484          
BLAST of CF509747 vs. ExPASy Swiss-Prot
Match: BIP2_MAIZE (Luminal-binding protein 2 OS=Zea mays GN=BIPE2 PE=1 SV=3)

HSP 1 Score: 347.436 bits (890), Expect = 2.605e-95
Identity = 175/183 (95.63%), Postives = 180/183 (98.36%), Query Frame = 2
Query:    2 KRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDC 550
            KRALS+QHQVRVEIESLFDG DFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEK+QI EIVLVGGSTRIPKVQQLL+DYFDGKEPNKGVNPDEAVA+GAAVQG ILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERS+TKDC
Sbjct:  300 KRALSNQHQVRVEIESLFDGTDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKSQIHEIVLVGGSTRIPKVQQLLRDYFDGKEPNKGVNPDEAVAFGAAVQGSILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSMTKDC 482          
BLAST of CF509747 vs. ExPASy Swiss-Prot
Match: BIP3_MAIZE (Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=2 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 4.443e-95
Identity = 175/183 (95.63%), Postives = 180/183 (98.36%), Query Frame = 2
Query:    2 KRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDC 550
            KRALS+QHQVRVEIESLFDG DFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEK+QI EIVLVGGSTRIPKVQQLLKDYF+GKEPNKGVNPDEAVA+GAAVQG ILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERS+TKDC
Sbjct:  300 KRALSNQHQVRVEIESLFDGTDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKSQIHEIVLVGGSTRIPKVQQLLKDYFNGKEPNKGVNPDEAVAFGAAVQGSILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSMTKDC 482          
BLAST of CF509747 vs. ExPASy Swiss-Prot
Match: BIP_SPIOL (Luminal-binding protein OS=Spinacia oleracea GN=HSC70 PE=2 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 2.205e-94
Identity = 172/183 (93.99%), Postives = 182/183 (99.45%), Query Frame = 2
Query:    2 KRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDC 550
            KRALSSQHQVRVEIESLFDG+DFSEPLTRARFEELNNDLFRKTMGPVKKAM+DAGLEKNQIDEIVLVGGSTRIPKVQQLLK++F+GKEP+KGVNPDEAVA+GAAVQG ILSGEGG+ETK+ILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTV+IQVFEGERSLTKDC
Sbjct:  303 KRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLEKNQIDEIVLVGGSTRIPKVQQLLKEFFNGKEPSKGVNPDEAVAFGAAVQGSILSGEGGEETKEILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVTIQVFEGERSLTKDC 485          
BLAST of CF509747 vs. ExPASy Swiss-Prot
Match: GRP78_APLCA (78 kDa glucose-regulated protein OS=Aplysia californica PE=1 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 4.323e-74
Identity = 139/182 (76.37%), Postives = 162/182 (89.01%), Query Frame = 2
Query:    2 KRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKD 547
            KRALSS HQVR+EIES FDG DFSE LTRA+FEELN DLFR TM PVK+ +EDA L+ + IDEIVLVGGSTRIPKVQQL+K+YF+GKEP++G+NPDEAVAYGAAVQ G+LSGE  ++T D++LLDV PLT+GIETVGGVMTKLIPRNTVIPTKKSQ+F+T  D Q TV+IQV+EGERS+TKD
Sbjct:  305 KRALSSAHQVRLEIESFFDGEDFSESLTRAKFEELNMDLFRSTMKPVKQVLEDADLKTDDIDEIVLVGGSTRIPKVQQLVKEYFNGKEPSRGINPDEAVAYGAAVQAGVLSGE--EDTGDLVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADNQPTVTIQVYEGERSMTKD 484          
BLAST of CF509747 vs. ExPASy Swiss-Prot
Match: GRP78_RAT (78 kDa glucose-regulated protein OS=Rattus norvegicus GN=Hspa5 PE=1 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 6.243e-73
Identity = 134/182 (73.63%), Postives = 161/182 (88.46%), Query Frame = 2
Query:    2 KRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKD 547
            KRALSSQHQ R+EIES F+G DFSE LTRA+FEELN DLFR TM PV+K +ED+ L+K+ IDEIVLVGGSTRIPK+QQL+K++F+GKEP++G+NPDEAVAYGAAVQ G+LSG+   +T D++LLDV PLTLGIETVGGVMTKLIPRNTV+PTKKSQ+F+T  D Q TV+I+V+EGER LTKD
Sbjct:  296 KRALSSQHQARIEIESFFEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD--QDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKD 475          
The following BLAST results are available for this feature:
BLAST of CF509747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BIP5_TOBAC2.517e-9898.36Luminal-binding protein 5 OS=Nicotiana tabacum GN=... [more]
BIP4_TOBAC7.324e-9897.81Luminal-binding protein 4 OS=Nicotiana tabacum GN=... [more]
BIP1_ARATH4.747e-9796.72Luminal-binding protein 1 OS=Arabidopsis thaliana ... [more]
BIP_SOLLC1.058e-9696.72Luminal-binding protein OS=Solanum lycopersicum PE... [more]
BIP2_ARATH2.356e-9696.17Luminal-binding protein 2 OS=Arabidopsis thaliana ... [more]
BIP2_MAIZE2.605e-9595.63Luminal-binding protein 2 OS=Zea mays GN=BIPE2 PE=... [more]
BIP3_MAIZE4.443e-9595.63Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=... [more]
BIP_SPIOL2.205e-9493.99Luminal-binding protein OS=Spinacia oleracea GN=HS... [more]
GRP78_APLCA4.323e-7476.3778 kDa glucose-regulated protein OS=Aplysia califo... [more]
GRP78_RAT6.243e-7373.6378 kDa glucose-regulated protein OS=Rattus norvegi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-255 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509747 ID=CF509747; Name=CF509747; organism=Citrus sinensis; type=EST; length=550bp
TAAGAGAGCTCTCAGCAGCCAGCACCAGGTCCGTGTTGAAATTGAGTCAC
TTTTCGATGGCATTGACTTCTCCGAGCCACTTACTAGGGCTCGCTTTGAG
GAGTTGAATAATGACTTGTTCAGAAAGACCATGGGACCTGTGAAGAAGGC
CATGGAAGATGCTGGATTAGAGAAGAATCAGATTGATGAGATTGTTCTTG
TTGGTGGTAGTACTAGGATTCCCAAGGTTCAACAGCTTCTCAAAGACTAT
TTTGATGGTAAAGAGCCTAACAAGGGTGTGAACCCAGATGAGGCAGTTGC
TTATGGTGCTGCTGTACAAGGTGGCATCTTGAGTGGTGAAGGTGGTGATG
AAACCAAAGATATCCTTCTCTTGGATGTGGCTCCACTCACCCTTGGTATC
GAGACAGTTGGTGGGGTGATGACCAAGTTGATCCCAAGAAACACGGTCAT
TCCAACCAAGAAATCTCAAGTTTTCACCACTTATCAAGACCAGCAGACTA
CAGTTTCCATTCAGGTTTTTGAAGGTGAAAGGAGTCTCACAAAGGATTGC
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