CF509752

Overview
NameCF509752
Unique NameCF509752
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length371
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5977 contig Csv1_Contig5977:266..635. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF509752 vs. ExPASy Swiss-Prot
Match: 6PGL5_ARATH (Probable 6-phosphogluconolactonase 5, chloroplastic OS=Arabidopsis thaliana GN=EMB2024 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 6.109e-50
Identity = 66/79 (83.54%), Postives = 73/79 (92.41%), Query Frame = 1 
Query:    1 KYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPI 237
            K+TADLS KF KE+G+FTVV+SGGSLI SLRKLVE PYVDSI+WA+WH FWVDERVVPK+HDDSNYKLAYD FLSKVPI
Sbjct:   98 KFTADLSDKFCKERGAFTVVVSGGSLIKSLRKLVESPYVDSIDWARWHFFWVDERVVPKNHDDSNYKLAYDSFLSKVPI 176

HSP 2 Score: 77.0258 bits (188), Expect = 6.109e-50
Identity = 37/52 (71.15%), Postives = 43/52 (82.69%), Query Frame = 2 
Query:  218 SFL-RYQLPPGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPK 370
            SFL +  +PPGNVYAIN+ALSAE AA+DYETCLKHL  +NIL  S +TGFPK
Sbjct:  169 SFLSKVPIPPGNVYAINEALSAEAAADDYETCLKHLVNTNILRVSESTGFPK 220
[Close]
BLAST of CF509752 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSJ (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0529100 PE=2 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 2.495e-48
Identity = 64/81 (79.01%), Postives = 74/81 (91.36%), Query Frame = 1 
Query:    1 KYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITT 243
            KYTA+LSAK   E+G+FTVVLSGGSLI ++RKL EPPY+DS++W+KWHVFWVDERVVPKDH+DSNYKLA DGFLSKVPI T
Sbjct:   90 KYTAELSAKLAAERGAFTVVLSGGSLIKNIRKLAEPPYLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPT 170

HSP 2 Score: 70.4774 bits (171), Expect = 2.495e-48
Identity = 31/45 (68.89%), Postives = 38/45 (84.44%), Query Frame = 2 
Query:  236 LPPGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPK 370
            +P G VYAINDALSAEGAA+DYETCLK L K+ ++A S +TGFP+
Sbjct:  168 IPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPR 212
[Close]
BLAST of CF509752 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSI (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_031067 PE=3 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 2.495e-48
Identity = 64/81 (79.01%), Postives = 74/81 (91.36%), Query Frame = 1 
Query:    1 KYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITT 243
            KYTA+LSAK   E+G+FTVVLSGGSLI ++RKL EPPY+DS++W+KWHVFWVDERVVPKDH+DSNYKLA DGFLSKVPI T
Sbjct:   90 KYTAELSAKLAAERGAFTVVLSGGSLIKNIRKLAEPPYLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPT 170

HSP 2 Score: 70.4774 bits (171), Expect = 2.495e-48
Identity = 31/45 (68.89%), Postives = 38/45 (84.44%), Query Frame = 2 
Query:  236 LPPGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPK 370
            +P G VYAINDALSAEGAA+DYETCLK L K+ ++A S +TGFP+
Sbjct:  168 IPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPR 212
[Close]
BLAST of CF509752 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSJ (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0547100 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 7.452e-41
Identity = 58/79 (73.42%), Postives = 67/79 (84.81%), Query Frame = 1 
Query:    1 KYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPI 237
            KYTA LS +   E+G+FTV LSGGSLI +LRKL E PY++++EW+KWHVFWVDERVVPKDH DSNYKLA DG LSKVPI
Sbjct:   93 KYTARLSGEAVAERGAFTVALSGGSLIKALRKLTESPYLEAVEWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPI 171

HSP 2 Score: 62.7734 bits (151), Expect = 7.452e-41
Identity = 27/45 (60.00%), Postives = 33/45 (73.33%), Query Frame = 2 
Query:  236 LPPGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPK 370
            +P   +YAIND LSAEGAA++YETCLK L    ++A S  TGFPK
Sbjct:  171 IPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPK 215
[Close]
BLAST of CF509752 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSI (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_30141 PE=3 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 7.452e-41
Identity = 58/79 (73.42%), Postives = 67/79 (84.81%), Query Frame = 1 
Query:    1 KYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPI 237
            KYTA LS +   E+G+FTV LSGGSLI +LRKL E PY++++EW+KWHVFWVDERVVPKDH DSNYKLA DG LSKVPI
Sbjct:   93 KYTARLSGEAVAERGAFTVALSGGSLIKALRKLTESPYLEAVEWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPI 171

HSP 2 Score: 62.7734 bits (151), Expect = 7.452e-41
Identity = 27/45 (60.00%), Postives = 33/45 (73.33%), Query Frame = 2 
Query:  236 LPPGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPK 370
            +P   +YAIND LSAEGAA++YETCLK L    ++A S  TGFPK
Sbjct:  171 IPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPK 215
[Close]
BLAST of CF509752 vs. ExPASy Swiss-Prot
Match: 6PGL2_ARATH (Probable 6-phosphogluconolactonase 2 OS=Arabidopsis thaliana GN=At3g49360 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 2.093e-37
Identity = 61/79 (77.22%), Postives = 68/79 (86.08%), Query Frame = 1 
Query:    1 KYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPI 237
            KYTADLS+KF KE+G FTVVLSGG LI  L KL+E PY+DSIEW+KWH+FWVDERV   DH DSNYKLAYDGFLSKVP+
Sbjct:   21 KYTADLSSKFCKERGVFTVVLSGGDLIAWLWKLLEAPYIDSIEWSKWHIFWVDERVCAWDHADSNYKLAYDGFLSKVPV 99

HSP 2 Score: 46.2098 bits (108), Expect = 2.093e-37
Identity = 23/49 (46.94%), Postives = 31/49 (63.27%), Query Frame = 2 
Query:  236 LPPGNVYAINDALSAEG----AAEDYETCLKHLTKSNILATSAATGFPK 370
            +P  N+YAI++ L AEG    AAE YE CLK     NI+ T  ++GFP+
Sbjct:   99 VPAENIYAIDNGLGAEGNAELAAERYEECLKQKVNQNIIRTYKSSGFPQ 147
[Close]
BLAST of CF509752 vs. ExPASy Swiss-Prot
Match: 6PGL3_ARATH (Probable 6-phosphogluconolactonase 3 OS=Arabidopsis thaliana GN=At5g24420 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.875e-35
Identity = 61/79 (77.22%), Postives = 67/79 (84.81%), Query Frame = 1 
Query:    1 KYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPI 237
            +YTA+LSAKF KEKG FTVVLSGG LID L KLV+PPY+DSIEW KWHVFWVDERV   +  DSNYKLA +GFLSKVPI
Sbjct:   21 EYTANLSAKFIKEKGLFTVVLSGGDLIDWLCKLVQPPYIDSIEWPKWHVFWVDERVCAWEDPDSNYKLAMEGFLSKVPI 99

HSP 2 Score: 44.2838 bits (103), Expect = 1.875e-35
Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 2 
Query:  236 LPPGNVYAINDALSAEGAAED----YETCLKHLTKSNILATSAATGFPK 370
            +P  N+YAI+  L+A+G AE     YE CLK+L K  I+  S  TG+P+
Sbjct:   99 IPDKNIYAIDKHLAADGNAEHCATLYEECLKNLVKEKIIPISKKTGYPE 147
[Close]
BLAST of CF509752 vs. ExPASy Swiss-Prot
Match: 6PGL4_ARATH (Probable 6-phosphogluconolactonase 4 OS=Arabidopsis thaliana GN=At5g24410 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.192e-34
Identity = 60/78 (76.92%), Postives = 69/78 (88.46%), Query Frame = 1 
Query:    4 YTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPI 237
            YTA+LSAKF KE+G FTVVLSGG LI  L +L+EP Y +SIEW+KWH+FWVDERVVP DH+DSNYKLA+DGFLSKVPI
Sbjct:   28 YTANLSAKFCKERGYFTVVLSGGDLISWLSELLEPKYQESIEWSKWHIFWVDERVVPLDHEDSNYKLAFDGFLSKVPI 105

HSP 2 Score: 37.3502 bits (85), Expect = 1.192e-34
Identity = 19/49 (38.78%), Postives = 28/49 (57.14%), Query Frame = 2 
Query:  236 LPPGNVYAINDALSAEGAAED----YETCLKHLTKSNILATSAATGFPK 370
            +P  N+Y I+   +A G A+     YE CLK L   NI+ T  ++GFP+
Sbjct:  105 IPIANIYPIDKDCAALGDAKSAALLYEECLKRLVNRNIIRTYKSSGFPQ 153
[Close]
BLAST of CF509752 vs. ExPASy Swiss-Prot
Match: 6PGL1_ARATH (Probable 6-phosphogluconolactonase 1 OS=Arabidopsis thaliana GN=At1g13700 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.635e-26
Identity = 48/78 (61.54%), Postives = 59/78 (75.64%), Query Frame = 1 
Query:    4 YTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPI 237
            Y A++S    KE G+F +VLSGGSLI  + KL+EPPY   ++WAKW+VFW DERVV K+HDDSNYKLA D  LSKV +
Sbjct:   29 YIAEISEASIKEHGAFCIVLSGGSLISFMGKLIEPPYDKIVDWAKWYVFWADERVVAKNHDDSNYKLAKDNLLSKVNV 106

HSP 2 Score: 34.6538 bits (78), Expect = 3.635e-26
Identity = 15/43 (34.88%), Postives = 27/43 (62.79%), Query Frame = 2 
Query:  242 PGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPK 370
            P ++ +IND +SAE AA +YE  ++ + +S  +A S  +  P+
Sbjct:  108 PRHICSINDTVSAEEAATEYEFAIRQMVRSRTVAASDNSDSPR 150
[Close]
BLAST of CF509752 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSJ (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. japonica GN=Os07g0604000 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.829e-23
Identity = 39/79 (49.37%), Postives = 56/79 (70.89%), Query Frame = 1 
Query:    1 KYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPI 237
            +Y + +S    KE+G F + LSGG L+  L KL E PY  +++W+KW++FW DER V K+H +SNY++  +GFLSKVPI
Sbjct:   32 EYISQVSEISVKERGYFAIALSGGPLVSFLGKLCEAPYNKTLDWSKWYIFWSDERAVAKNHAESNYRITKEGFLSKVPI 110

HSP 2 Score: 36.965 bits (84), Expect = 9.829e-23
Identity = 17/42 (40.48%), Postives = 24/42 (57.14%), Query Frame = 2 
Query:  245 GNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPK 370
            G+VY+IND  + E AA DYE  ++ L K   +  S +   PK
Sbjct:  113 GHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPK 154
The following BLAST results are available for this feature:
BLAST of CF509752 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
6PGL5_ARATH6.109e-5083.54Probable 6-phosphogluconolactonase 5, chloroplasti... [more]
6PGL4_ORYSJ2.495e-4879.01Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL4_ORYSI2.495e-4879.01Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL3_ORYSJ7.452e-4173.42Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL3_ORYSI7.452e-4173.42Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL2_ARATH2.093e-3777.22Probable 6-phosphogluconolactonase 2 OS=Arabidopsi... [more]
6PGL3_ARATH1.875e-3577.22Probable 6-phosphogluconolactonase 3 OS=Arabidopsi... [more]
6PGL4_ARATH1.192e-3476.92Probable 6-phosphogluconolactonase 4 OS=Arabidopsi... [more]
6PGL1_ARATH3.635e-2661.54Probable 6-phosphogluconolactonase 1 OS=Arabidopsi... [more]
6PGL2_ORYSJ9.829e-2349.37Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-260 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509752 ID=CF509752; Name=CF509752; organism=Citrus sinensis; type=EST; length=371bp
AAATACACCGCCGATCTATCTGCCAAGTTCGGTAAAGAGAAGGGCTCCTT
CACTGTCGTCTTATCCGGTGGTTCTCTCATCGACTCCCTCAGGAAATTAG
TGGAACCCCCGTATGTAGATTCAATTGAATGGGCGAAATGGCATGTGTTT
TGGGTTGATGAAAGAGTTGTTCCCAAGGATCATGATGATAGCAATTATAA
GCTTGCTTATGATGGTTTCCTTTCTAAGGTACCAATTACCACCTGGCAAT
GTCTATGCCATCAATGATGCATTATCTGCTGAAGGTGCAGCTGAAGATTA
TGAGACTTGTCTCAAGCATTTGACAAAGAGCAATATATTAGCTACATCTG
CTGCTACTGGTTTTCCAAAGT
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