CF509780

Overview
NameCF509780
Unique NameCF509780
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length571
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509780 vs. ExPASy Swiss-Prot
Match: ZDHC5_ARATH (Probable S-acyltransferase At3g04970 OS=Arabidopsis thaliana GN=At3g04970 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.749e-37
Identity = 65/109 (59.63%), Postives = 71/109 (65.14%), Query Frame = 1
Query:    1 TSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPK*VPFFLNKHSL*NFLFHL**KDFSLDLCFRPARSKHCSICNRCVARFDHHCGWM 327
            TS L V +GV  FLLT F+DPGTV AENVS+Y SAYPYD+IIY++KECSTCKIPK                              PARSKHCSICNRCVARFDHHCGWM
Sbjct:  115 TSFLAVIVGVILFLLTCFSDPGTVNAENVSRYISAYPYDDIIYSKKECSTCKIPK------------------------------PARSKHCSICNRCVARFDHHCGWM 193          

HSP 2 Score: 43.5134 bits (101), Expect = 6.749e-37
Identity = 17/18 (94.44%), Postives = 18/18 (100.00%), Query Frame = 2
Query:  428 NNCIGERNTRYFMAFLLW 481
            NNCIGERNT+YFMAFLLW
Sbjct:  194 NNCIGERNTKYFMAFLLW 211          
BLAST of CF509780 vs. ExPASy Swiss-Prot
Match: ZDHC4_BOVIN (Probable palmitoyltransferase ZDHHC4 OS=Bos taurus GN=ZDHHC4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.026e-14
Identity = 33/103 (32.04%), Postives = 47/103 (45.63%), Query Frame = 1
Query:   22 IGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEK-ECSTCKIPK*VPFFLNKHSL*NFLFHL**KDFSLDLCFRPARSKHCSICNRCVARFDHHCGWM 327
            + + FF L+   +PGT+   N   +   Y +D +++ +   C TC + K                              PARSKHCS+CNRCV RFDHHC W+
Sbjct:  110 VNLLFFTLSCVTNPGTITKANELLFLQVYEFDGVMFPKNVRCPTCDLRK------------------------------PARSKHCSVCNRCVHRFDHHCVWV 182          

HSP 2 Score: 30.4166 bits (67), Expect = 3.026e-14
Identity = 14/28 (50.00%), Postives = 19/28 (67.86%), Query Frame = 2
Query:  392 FDLH*IFF*LLQNNCIGERNTRYFMAFL 475
            FD H ++     NNCIG  NTRYF+++L
Sbjct:  175 FDHHCVWV----NNCIGAWNTRYFLSYL 198          
BLAST of CF509780 vs. ExPASy Swiss-Prot
Match: ZDHC4_MOUSE (Probable palmitoyltransferase ZDHHC4 OS=Mus musculus GN=Zdhhc4 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.960e-11
Identity = 38/122 (31.15%), Postives = 57/122 (46.72%), Query Frame = 1
Query:   16 VGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKE-CSTCKIPK*VPFFLNKHSL*NFLFHL**KDFSLDLCFRPARSKHCSICNRCVARFDHHCGWM---VQFYFKLYSLLYML 369
            + + + FF LT  A+PGT+   N S     Y +D++++ +   C TC + K                              PARSKHC +C+RCV RFDHHC W+   +  +   Y L+Y+L
Sbjct:  108 LSVNLVFFTLTCAANPGTITKANESFLLQVYKFDDVMFPKNSRCPTCDLRK------------------------------PARSKHCRLCDRCVHRFDHHCVWVNNCIGAWNTRYFLIYLL 199          
BLAST of CF509780 vs. ExPASy Swiss-Prot
Match: SWF1_NEUCR (Palmitoyltransferase SWF1 OS=Neurospora crassa GN=swf-1 PE=3 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 5.877e-11
Identity = 31/96 (32.29%), Postives = 42/96 (43.75%), Query Frame = 1
Query:   34 FFLLTSFADPGTVKAENVSQYQSAYPYD-NIIYTEKECSTCKIPK*VPFFLNKHSL*NFLFHL**KDFSLDLCFRPARSKHCSICNRCVARFDHHC 318
            F  L+++ DPG + A+   +  + YPYD  + +    C TC + K                              PARSKHCSIC +CV R DHHC
Sbjct:  121 FLYLSAYTDPGVINAKTHVREMARYPYDFTLFHPGTSCETCHLLK------------------------------PARSKHCSICKKCVGRMDHHC 186          

HSP 2 Score: 26.5646 bits (57), Expect = 5.877e-11
Identity = 13/28 (46.43%), Postives = 16/28 (57.14%), Query Frame = 2
Query:  395 DLH*IFF*LLQNNCIGERNTRYFMAFLL 478
            D H IF     NNC+G  N R+F+  LL
Sbjct:  183 DHHCIFI----NNCVGANNQRWFILLLL 206          
BLAST of CF509780 vs. ExPASy Swiss-Prot
Match: SWF1_DEBHA (Palmitoyltransferase SWF1 OS=Debaryomyces hansenii GN=SWF1 PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 7.659e-11
Identity = 30/96 (31.25%), Postives = 45/96 (46.88%), Query Frame = 1
Query:   43 LTSFADPGTVKAENVSQYQSAYPYDNIIY-TEKECSTCKIPK*VPFFLNKHSL*NFLFHL**KDFSLDLCFRPARSKHCSICNRCVARFDHHCGWM 327
            + +F++PG +   NV +  + +  + +I+  +  CSTC+I K                              PARSKHCSICN C+  FDHHC W+
Sbjct:  123 MATFSNPGKITTGNVDKVDNFFQNNELIFFADNYCSTCEIIK------------------------------PARSKHCSICNNCIMLFDHHCIWV 188          

HSP 2 Score: 27.335 bits (59), Expect = 7.659e-11
Identity = 13/29 (44.83%), Postives = 18/29 (62.07%), Query Frame = 2
Query:  392 FDLH*IFF*LLQNNCIGERNTRYFMAFLL 478
            FD H I+     NNC+G  N ++FM FL+
Sbjct:  181 FDHHCIWV----NNCVGYYNYKWFMGFLI 205          
The following BLAST results are available for this feature:
BLAST of CF509780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ZDHC5_ARATH6.749e-3759.63Probable S-acyltransferase At3g04970 OS=Arabidopsi... [more]
ZDHC4_BOVIN3.026e-1432.04Probable palmitoyltransferase ZDHHC4 OS=Bos taurus... [more]
ZDHC4_MOUSE1.960e-1131.15Probable palmitoyltransferase ZDHHC4 OS=Mus muscul... [more]
SWF1_NEUCR5.877e-1132.29Palmitoyltransferase SWF1 OS=Neurospora crassa GN=... [more]
SWF1_DEBHA7.659e-1131.25Palmitoyltransferase SWF1 OS=Debaryomyces hansenii... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-288 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-81_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509780 ID=CF509780; Name=CF509780; organism=Citrus sinensis; type=EST; length=571bp
ACAAGCTTGTTGGGGGTTGGCATTGGTGTTTTTTTCTTTCTGTTAACCAG
CTTTGCGGATCCAGGAACTGTGAAAGCTGAGAATGTTTCTCAATATCAAT
CTGCTTATCCTTATGACAATATCATATACACAGAGAAAGAATGTTCAACT
TGTAAAATTCCAAAGTGAGTTCCTTTCTTTCTTAATAAACACTCTCTTTA
AAACTTCTTGTTTCATCTGTAATGAAAAGATTTTTCTTTGGATCTTTGTT
TCAGACCTGCTAGGTCGAAGCACTGCAGCATATGTAATCGCTGTGTTGCT
CGGTTTGACCATCATTGTGGATGGATGGTACAGTTTTATTTTAAACTATA
TTCCTTGTTGTATATGCTGAATGATGAAAATCATCAATTCTTTTGATTTG
CACTGAATTTTTTTTTAACTATTGCAGAACAATTGTATAGGGGAGAGAAA
TACCCGATATTTCATGGCTTTTCTCTTATGGTGAGTATTCTATGATTATT
AGAATCTCTTTTGGCCTTAGTTGGGTCATCACCTTTGCTAGTTGGCCCTT
TAGATATACAATAAGCTGCAT
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