CF509790

Overview
NameCF509790
Unique NameCF509790
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length182
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5392 contig Csv1_Contig5392:240..421. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF509790 vs. ExPASy Swiss-Prot
Match: CATA_SOLAP (Catalase OS=Soldanella alpina PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.595e-27
Identity = 57/60 (95.00%), Postives = 57/60 (95.00%), Query Frame = 3 
Query:    3 ERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETL 182
            ERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTVIHERGSPETL
Sbjct:   57 ERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETL 116
[Close]
BLAST of CF509790 vs. ExPASy Swiss-Prot
Match: CATA_PEA (Catalase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.595e-27
Identity = 57/60 (95.00%), Postives = 57/60 (95.00%), Query Frame = 3 
Query:    3 ERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETL 182
            ERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTVIHERGSPETL
Sbjct:   57 ERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETL 116
[Close]
BLAST of CF509790 vs. ExPASy Swiss-Prot
Match: CATA4_SOYBN (Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.595e-27
Identity = 57/60 (95.00%), Postives = 57/60 (95.00%), Query Frame = 3 
Query:    3 ERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETL 182
            ERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTVIHERGSPETL
Sbjct:   57 ERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETL 116
[Close]
BLAST of CF509790 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 9.595e-27
Identity = 57/60 (95.00%), Postives = 57/60 (95.00%), Query Frame = 3 
Query:    3 ERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETL 182
            ERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTVIHERGSPETL
Sbjct:   57 ERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETL 116
[Close]
BLAST of CF509790 vs. ExPASy Swiss-Prot
Match: CATA_PHAAU (Catalase OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.253e-26
Identity = 56/60 (93.33%), Postives = 57/60 (95.00%), Query Frame = 3 
Query:    3 ERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETL 182
            ERIPERVVHARGASAKGFFE THD+SHLTCAD  RAPGVQTPVIVRFSTVIHERGSPETL
Sbjct:   57 ERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETL 116
[Close]
BLAST of CF509790 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSJ (Catalase isozyme B OS=Oryza sativa subsp. japonica GN=CATB PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.253e-26
Identity = 56/60 (93.33%), Postives = 57/60 (95.00%), Query Frame = 3 
Query:    3 ERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETL 182
            ERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTV+HERGSPETL
Sbjct:   57 ERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVVHERGSPETL 116
[Close]
BLAST of CF509790 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSI (Catalase isozyme B OS=Oryza sativa subsp. indica GN=CATB PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 1.253e-26
Identity = 56/60 (93.33%), Postives = 57/60 (95.00%), Query Frame = 3 
Query:    3 ERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETL 182
            ERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTV+HERGSPETL
Sbjct:   57 ERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVVHERGSPETL 116
[Close]
BLAST of CF509790 vs. ExPASy Swiss-Prot
Match: CATA1_RICCO (Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 1.253e-26
Identity = 56/60 (93.33%), Postives = 57/60 (95.00%), Query Frame = 3 
Query:    3 ERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETL 182
            ERIPERVVHARGASAKGFFE THD+SHLTCAD  RAPGVQTPVIVRFSTVIHERGSPETL
Sbjct:   57 ERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETL 116
[Close]
BLAST of CF509790 vs. ExPASy Swiss-Prot
Match: CATA1_MAIZE (Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.637e-26
Identity = 55/60 (91.67%), Postives = 57/60 (95.00%), Query Frame = 3 
Query:    3 ERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETL 182
            ERIPERVVHARGASAKGFFE THD+SHLTCAD  RAPGVQTPVIVRFSTV+HERGSPETL
Sbjct:   57 ERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVIVRFSTVVHERGSPETL 116
[Close]
BLAST of CF509790 vs. ExPASy Swiss-Prot
Match: CATA3_SOYBN (Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.138e-26
Identity = 56/60 (93.33%), Postives = 57/60 (95.00%), Query Frame = 3 
Query:    3 ERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETL 182
            ERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTP+IVRFSTVIHERGSPETL
Sbjct:   57 ERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPLIVRFSTVIHERGSPETL 116
The following BLAST results are available for this feature:
BLAST of CF509790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
CATA_SOLAP9.595e-2795.00Catalase OS=Soldanella alpina PE=2 SV=1[more]
CATA_PEA9.595e-2795.00Catalase OS=Pisum sativum PE=2 SV=1[more]
CATA4_SOYBN9.595e-2795.00Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1[more]
CATA1_GOSHI9.595e-2795.00Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P... [more]
CATA_PHAAU1.253e-2693.33Catalase OS=Phaseolus aureus PE=2 SV=1[more]
CATA2_ORYSJ1.253e-2693.33Catalase isozyme B OS=Oryza sativa subsp. japonica... [more]
CATA2_ORYSI1.253e-2693.33Catalase isozyme B OS=Oryza sativa subsp. indica G... [more]
CATA1_RICCO1.253e-2693.33Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=... [more]
CATA1_MAIZE1.637e-2691.67Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1[more]
CATA3_SOYBN2.138e-2693.33Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-298 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-81_D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509790 ID=CF509790; Name=CF509790; organism=Citrus sinensis; type=EST; length=182bp
GGGAGAGGATTCCAGAACGTGTCGTCCATGCTAGGGGAGCCAGTGCTAAG
GGTTTCTTTGAGTGCACCCATGATATTTCTCACCTTACTTGTGCTGATCT
TTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCCACTG
TTATCCATGAGCGGGGCAGCCCTGAGACACTC
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