CF509791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509791 vs. ExPASy Swiss-Prot
Match: DUS3L_ARATH (tRNA-dihydrouridine synthase 3-like OS=Arabidopsis thaliana GN=At4g38890 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.758e-30 Identity = 94/213 (44.13%), Postives = 123/213 (57.75%), Query Frame = 2 Query: 2 PFLSSEGPCPYGLACRFSGTHRDVVDVAGSTNTLRKSSEVNGLNKDVQKLLWKNKMKFPKADAKLKSLGLLGPAK---SKMKVMEDKEQEGVVDSNNSHATNGNGCMKGTGDSVDESECSPCVPEENNIINDRPLKKAKSENVENCCSVEGD-----NGVSVLEEDTRNNTADTQPAAKIDD---ILPETDGSLKTHSRE-KKLIDFREKLYL 604 PF++S C YGL+CRF G+HRD+ G+++ KS E+N NK+ Q+LLWKNKM F ADAKLKSLGLLG AK + ++ +K Q G+ N + AT + + E +P RP+KKAKSE+ +N S GD +GV LEE+T+ N T A D+ + ETD SLK H RE KKLIDFR+KLYL Sbjct: 149 PFVASGMKCAYGLSCRFLGSHRDIT---GNSDDKEKS-EMNFFNKETQRLLWKNKMTFTNADAKLKSLGLLGHAKKSNAAEEITAEKTQNGM---NGTQATEVAVDSAVSSEHTSEMIQDVDIPGPLETEEVRPMKKAKSEDQKN--SKTGDVGGVYDGVK-LEEETKKNGYPTSKANVEDEDSIKIVETDSSLKLHPREKKKLIDFRDKLYL 351
BLAST of CF509791 vs. ExPASy Swiss-Prot
Match: DUS3L_ORYSJ (tRNA-dihydrouridine synthase 3-like OS=Oryza sativa subsp. japonica GN=Os04g0117600 PE=2 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 7.511e-28 Identity = 81/210 (38.57%), Postives = 106/210 (50.48%), Query Frame = 2 Query: 2 PFLSSEGPCPYGLACRFSGTHRDVVDVAGSTNTLRKSSEVNGLNKDVQKLLWKNKMKFPKADAKLKSLGLLGPAKSKMKVMEDKEQ------EGVVDSNNSHATN---GNGCMKGTGDSVDESECSPCVPEENNIINDRPLKKAKSENVENCCSVEGDNGVSVLEEDTRNNTADTQPAAKIDDILPETDGSLKTHSREKKLIDFREKLYL 604 PF + + CPYGL CRF GTH+D+ +G+ L + E+N LNKD+QKLLWKNK KFPKA A++K LGL KSK D ++ +G D N N C + +D SE P + + RP KK+K E+ E G + ED N + +P+ TD H REKK+IDFREKLYL Sbjct: 133 PFTNLDQLCPYGLTCRFLGTHKDIHAASGN---LSEKHEINALNKDIQKLLWKNKYKFPKASAQIKLLGLKEVIKSKPDAANDDKKVNHDNLDGNDDENKEPLCNPPVNAECDSTLCEELDRSEGEPLIDNSIPCVEPRPTKKSKVESDEIDKHGAGTLNTNTESEDP-NLSNGLEPSNNSSSC--RTDLITTPHLREKKIIDFREKLYL 336 The following BLAST results are available for this feature:
BLAST of CF509791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509791 ID=CF509791; Name=CF509791; organism=Citrus sinensis; type=EST; length=606bpback to top |