CF509814

Overview
NameCF509814
Unique NameCF509814
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509814 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 1.978e-77
Identity = 133/168 (79.17%), Postives = 148/168 (88.10%), Query Frame = 3
Query:    3 KISGTVDFIFGDATAMFQNCQILAKKGLDNQKNTITAHGRKDPNEPTGFSIQFCNITADSDL-LPFVNSTETYLGRPWKLFSRTVFMQSYMSNVIRPKGWLEWNNDFALDTLYYGEYKNYGPGGGLATRITWPGYHILNNAVQANNFTVAQFLEGNLWLPSTGVKYTA 503
            KISGTVDFIFGDAT +FQNCQILAKKGL NQKN+ITA GRKDPNEPTG SIQFCNITADSDL    VNST TYLGRPWKL+SRTV MQS++SNVIRP+GWLEWN DFAL++L+YGEY NYGPG GL +R+ WPGY + N + QA N+TVAQF+EGNLWLPSTGVKYTA
Sbjct:  351 KISGTVDFIFGDATVVFQNCQILAKKGLPNQKNSITAQGRKDPNEPTGISIQFCNITADSDLEAASVNSTPTYLGRPWKLYSRTVIMQSFLSNVIRPEGWLEWNGDFALNSLFYGEYMNYGPGAGLGSRVKWPGYQVFNESTQAKNYTVAQFIEGNLWLPSTGVKYTA 518          
BLAST of CF509814 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 280.411 bits (716), Expect = 4.125e-75
Identity = 122/170 (71.76%), Postives = 153/170 (90.00%), Query Frame = 3
Query:    6 ISGTVDFIFGDATAMFQNCQILAKKGLDNQKNTITAHGRKDPNEPTGFSIQFCNITADSDLLPFVNSTETYLGRPWKLFSRTVFMQSYMSNVIRPKGWLEWNNDFALDTLYYGEYKNYGPGGGLATRITWPGYHILNNAVQANNFTVAQFLEGNLWLPSTGVKYTAGLQV 515
            I+GTVDFIFGD T +FQNCQILAK+GL NQKNTITA GRKD N+P+GFSIQF NI+AD+DL+P++N+T TYLGRPWKL+SRTVF+++ MS+V+RP+GWLEWN DFALDTL+YGE+ NYGPG GL++R+ WPGYH+ NN+ QANNFTV+QF++GNLWLPSTGV ++ GL +
Sbjct:  356 ITGTVDFIFGDGTVVFQNCQILAKRGLPNQKNTITAQGRKDVNQPSGFSIQFSNISADADLVPYLNTTRTYLGRPWKLYSRTVFIRNNMSDVVRPEGWLEWNADFALDTLFYGEFMNYGPGSGLSSRVKWPGYHVFNNSDQANNFTVSQFIKGNLWLPSTGVTFSDGLYI 525          
BLAST of CF509814 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 3.268e-72
Identity = 122/168 (72.62%), Postives = 144/168 (85.71%), Query Frame = 3
Query:    6 ISGTVDFIFGDATAMFQNCQILAKKGLDNQKNTITAHGRKDPNEPTGFSIQFCNITADSDLLPFVNSTETYLGRPWKLFSRTVFMQSYMSNVIRPKGWLEWNNDFALDTLYYGEYKNYGPGGGLATRITWPGYHILNNAVQANNFTVAQFLEGNLWLPSTGVKYTAGL 509
            I+GTVDFIFGDATA+FQ+CQI AK+GL NQKN+ITA GRKDPNEPTGF+IQF NI AD+DLL  +N+T TYLGRPWKL+SRTVFMQ+YMS+ I P GWLEWN +FALDTLYYGEY N GPG  L  R+ WPGYH+LN + +ANNFTV+Q ++GNLWLPSTG+ + AGL
Sbjct:  358 ITGTVDFIFGDATAVFQSCQIKAKQGLPNQKNSITAQGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRPWKLYSRTVFMQNYMSDAINPVGWLEWNGNFALDTLYYGEYMNSGPGASLDRRVKWPGYHVLNTSAEANNFTVSQLIQGNLWLPSTGITFIAGL 525          
BLAST of CF509814 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 7.068e-59
Identity = 103/170 (60.59%), Postives = 125/170 (73.53%), Query Frame = 3
Query:    6 ISGTVDFIFGDATAMFQNCQILAKKGLDNQKNTITAHGRKDPNEPTGFSIQFCNITADSDLLPFVNSTETYLGRPWKLFSRTVFMQSYMSNVIRPKGWLEWNNDFALDTLYYGEYKNYGPGGGLATRITWPGYHILNNAVQANNFTVAQFLEGNLWLPSTGVKYTAGLQV 515
            I GTVDFIFG+A  + QNC I A+K +D QKNTITA  RKDPN+ TG SI    + A SDL     ST+TYLGRPWKLFSRTV+M SY+   +  +GWLEWN  FALDTLYYGEY N GPG GL  R++WPGY ++N+  +AN FTVA+F+ G+ WLPSTGV + AGL +
Sbjct:  429 IYGTVDFIFGNAAVVLQNCSIYARKPMDFQKNTITAQNRKDPNQNTGISIHASRVLAASDLQATNGSTQTYLGRPWKLFSRTVYMMSYIGGHVHTRGWLEWNTTFALDTLYYGEYLNSGPGSGLGQRVSWPGYRVINSTAEANRFTVAEFIYGSSWLPSTGVSFLAGLSI 598          
BLAST of CF509814 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 2.514e-56
Identity = 98/168 (58.33%), Postives = 127/168 (75.60%), Query Frame = 3
Query:    6 ISGTVDFIFGDATAMFQNCQILAKKGLDNQKNTITAHGRKDPNEPTGFSIQFCNITADSDLLPFVNSTETYLGRPWKLFSRTVFMQSYMSNVIRPKGWLEWNNDFALDTLYYGEYKNYGPGGGLATRITWPGYHILNNAVQANNFTVAQFLEGNLWLPSTGVKYTAGL 509
            I+GTVDFIFG+A  +FQNC ++ +K +  Q+NTITA GR DPN+ TG SIQ C I A +DL P  ++ ++YLGRPWK +SRTV M+SY+S+VI P GWLEW+ DFAL TL+YGEY+N GPG G + R+ WPGYH++ +   A  FTVA+ ++G  WL STGV YTAGL
Sbjct:  376 ITGTVDFIFGNAAVVFQNCNLIPRKQMKGQENTITAQGRTDPNQNTGTSIQNCEIFASADLEPVEDTFKSYLGRPWKEYSRTVVMESYISDVIDPAGWLEWDRDFALKTLFYGEYRNGGPGSGTSERVKWPGYHVITSPEVAEQFTVAELIQGGSWLGSTGVDYTAGL 543          
BLAST of CF509814 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 213.001 bits (541), Expect = 8.087e-55
Identity = 95/168 (56.55%), Postives = 121/168 (72.02%), Query Frame = 3
Query:    6 ISGTVDFIFGDATAMFQNCQILAKKGLDNQKNTITAHGRKDPNEPTGFSIQFCNITADSDLLPFVNSTETYLGRPWKLFSRTVFMQSYMSNVIRPKGWLEWNNDFALDTLYYGEYKNYGPGGGLATRITWPGYHILNNAVQANNFTVAQFLEGNLWLPSTGVKYTAGL 509
            ++GTVDFIFG+A  +FQ CQ++A+K    Q+N +TA GR DPN+ TG SIQFCNI A SDL P +    TYLGRPWK +SRTV M+SY+  +I P GW EW+ DFAL TLYYGE+ N GPG G + R+ WPGYH++ +  +A  FTVA+ ++G  WL STGV Y  GL
Sbjct:  377 VTGTVDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAKAMPFTVAKLIQGGSWLRSTGVAYVDGL 544          
BLAST of CF509814 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.353e-54
Identity = 96/168 (57.14%), Postives = 118/168 (70.24%), Query Frame = 3
Query:    6 ISGTVDFIFGDATAMFQNCQILAKKGLDNQKNTITAHGRKDPNEPTGFSIQFCNITADSDLLPFVNSTETYLGRPWKLFSRTVFMQSYMSNVIRPKGWLEWNNDFALDTLYYGEYKNYGPGGGLATRITWPGYHILNNAVQANNFTVAQFLEGNLWLPSTGVKYTAGL 509
            ++GTVDFIFG+A  +FQ CQI+A+K    QKN +TA GR DPN+ TG SIQFC+I A  DL P +N  +TYLGRPWK  SRTV MQSY+   I P GW EW  DFAL TLYYGE+ N GPG G + R+ WPGYH++ +  +A  FTVA+ ++G  WL ST V Y  GL
Sbjct:  375 VTGTVDFIFGNAAVVFQKCQIVARKPNKRQKNMVTAQGRTDPNQATGTSIQFCDIIASPDLEPVMNEYKTYLGRPWKKHSRTVVMQSYLDGHIDPSGWFEWRGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPNEAMPFTVAELIQGGSWLNSTSVAYVEGL 542          
BLAST of CF509814 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 5.242e-54
Identity = 93/168 (55.36%), Postives = 120/168 (71.43%), Query Frame = 3
Query:    6 ISGTVDFIFGDATAMFQNCQILAKKGLDNQKNTITAHGRKDPNEPTGFSIQFCNITADSDLLPFVNSTETYLGRPWKLFSRTVFMQSYMSNVIRPKGWLEWNNDFALDTLYYGEYKNYGPGGGLATRITWPGYHILNNAVQANNFTVAQFLEGNLWLPSTGVKYTAGL 509
            ++GT+DFIFG+A  +FQ C+++A+K    Q+N +TA GR DPN+ TG SIQFCNI A SDL P +    TYLGRPWK +SRTV M+SY+  +I P GW EW+ DFAL TLYYGE+ N GPG G + R+ WPGYH + +  +A  FTVA+ ++G  WL STGV Y  GL
Sbjct:  381 VTGTIDFIFGNAAVVFQKCKLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKKYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHCITDPAEAMPFTVAKLIQGGSWLRSTGVAYVDGL 548          
BLAST of CF509814 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 1.168e-53
Identity = 92/168 (54.76%), Postives = 120/168 (71.43%), Query Frame = 3
Query:    6 ISGTVDFIFGDATAMFQNCQILAKKGLDNQKNTITAHGRKDPNEPTGFSIQFCNITADSDLLPFVNSTETYLGRPWKLFSRTVFMQSYMSNVIRPKGWLEWNNDFALDTLYYGEYKNYGPGGGLATRITWPGYHILNNAVQANNFTVAQFLEGNLWLPSTGVKYTAGL 509
            ++GT+DFIFG+A  +FQ CQ++A+K    Q+N +TA GR DPN+ TG SIQFC+I A  DL P V    TYLGRPWK +SRTV M+SY+  +I P GW EW+ DFAL TLYYGE+ N GPG G + R+ WPGYH++ +  +A +FTVA+ ++G  WL ST V Y  GL
Sbjct:  381 VTGTIDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCDIIASPDLKPVVKEFPTYLGRPWKKYSRTVVMESYLGGLIDPSGWAEWHGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAEAMSFTVAKLIQGGSWLRSTDVAYVDGL 548          
BLAST of CF509814 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 1.992e-53
Identity = 96/169 (56.80%), Postives = 120/169 (71.01%), Query Frame = 3
Query:    3 KISGTVDFIFGDATAMFQNCQILAKKGLDNQKNTITAHGRKDPNEPTGFSIQFCNITADSDLLPFVNSTETYLGRPWKLFSRTVFMQSYMSNVIRPKGWLEWNNDFALDTLYYGEYKNYGPGGGLATRITWPGYHILNNAVQANNFTVAQFLEGNLWLPSTGVKYTAGL 509
            +I GTVDFIFG+A  + Q+C I A+K +  QK TITA  RKDPN+ TG SI  C + A  DL     S  TYLGRPWKL+SR V+M S M + I P+GWLEWN  FALD+LYYGEY N G G G+  R+ WPGYH++ + V+A+ FTVAQF+ G+ WLPSTGV + +GL
Sbjct:  417 EIYGTVDFIFGNAAVILQSCNIYARKPMAQQKITITAQNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKWPGYHVITSTVEASKFTVAQFISGSSWLPSTGVSFFSGL 585          
The following BLAST results are available for this feature:
BLAST of CF509814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
PME_PRUPE1.978e-7779.17Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME44_ARATH4.125e-7571.76Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME32_ARATH3.268e-7272.62Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME34_ARATH7.068e-5960.59Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME1_FICAW2.514e-5658.33Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME1_SOLLC8.087e-5556.55Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9... [more]
PME3_SOLLC2.353e-5457.14Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]
PME22_SOLLC5.242e-5455.36Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]
PME21_SOLLC1.168e-5354.76Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME61_ARATH1.992e-5356.80Probable pectinesterase/pectinesterase inhibitor 6... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-322 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-81_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509814 ID=CF509814; Name=CF509814; organism=Citrus sinensis; type=EST; length=563bp
GCAAAATCAGCGGCACAGTAGATTTCATCTTTGGTGATGCAACTGCAATG
TTCCAAAACTGCCAGATCCTAGCTAAAAAAGGCCTAGATAATCAAAAGAA
CACCATCACGGCACACGGGCGCAAGGACCCAAATGAGCCAACAGGCTTCT
CCATACAATTCTGCAACATCACAGCTGACTCAGACCTGCTACCTTTTGTA
AACTCAACAGAAACATACCTTGGGAGGCCATGGAAGCTGTTTTCAAGAAC
CGTTTTCATGCAGTCATACATGAGCAATGTTATCAGACCAAAGGGCTGGC
TGGAATGGAACAACGATTTTGCATTAGACACATTGTATTATGGTGAGTAC
AAGAACTATGGGCCTGGGGGTGGGCTGGCTACCAGGATTACATGGCCGGG
CTATCATATCTTGAACAATGCAGTTCAGGCCAATAATTTTACTGTGGCTC
AATTTCTTGAAGGAAATTTGTGGCTGCCATCAACTGGGGTTAAATACACG
GCAGGTTTGCAGGTGTAAGCAGAAAAAATTTAATAATATTTTCGTATAAA
TAAGTTTTTTTCT
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