CF509832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF509832 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 7.341e-25 Identity = 59/194 (30.41%), Postives = 98/194 (50.52%), Query Frame = 2 Query: 8 LVLLAGYMKNATVAISAFSICLNVSAFQLMIFLGFLGASCVRVSNELGRGNAKATKFSIKVILTISACLGVICWILCLIFGRQISYLFTTSEEIAEEXXXXXXXXXXXXXXXXXQPVLSGVAVGAGMQSTVAFVNLGSYYFVGVPTGVLLAYVANXXXXXXXXXXXXXXXXQTIILSFIIWRTDWDDQVNKASQ 589 LV+++G + N T+++ A SIC+ + + LG A VRVSNELG GN + S+ V+ + + + ++ L+F +S FT+ E+ QP+LSGVA+G+G Q+ VA+VNL +YY +G+P G +L + + QT+ L + +T+W +V A+Q Sbjct: 297 LVIISGLLSNPTISLDAISICMYYLNWDMQFMLGLSAAISVRVSNELGAGNPRVAMLSVVVVNITTVLISSVLCVIVLVFRVGLSKAFTSDAEVIAAVSDLFPLLAVSIFLNGIQPILSGVAIGSGWQAVVAYVNLVTYYVIGLPIGCVLGFKTSLGVAGIWWGMIAGVILQTLTLIVLTLKTNWTSEVENAAQ 490
BLAST of CF509832 vs. ExPASy Swiss-Prot
Match: S47A1_DANRE (Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.887e-15 Identity = 51/178 (28.65%), Postives = 72/178 (40.45%), Query Frame = 2 Query: 50 ISAFSICLNVSAFQLMIFLGFLGASCVRVSNELGRGNAKATKFSIKVILTISACLGVICWILCLIFGRQISYLFTTSEEIAEEXXXXXXXXXXXXXXXXXQPVLSGVAVGAGMQSTVAFVNLGSYYFVGVPTGVLLAYVANXXXXXXXXXXXXXXXXQTIILSFIIWRTDWDDQVNKA 583 + A S+ ++ M LGF A+ VRV N LG GN + K S KV L + + L I+Y+FTT EEI + G+ GAG Q A N+ YYFVG PTGV L + + Q++ +I++ DW +A Sbjct: 310 LGAQSVVYELATIAYMFPLGFAVAASVRVGNALGAGNTERAKLSAKVALVCGVLVSCVVATLIGCTKDVIAYIFTTEEEIVSRVSQVMIMYGFFHLFDAIAGITGGIVRGAGKQLLGALCNIVGYYFVGFPTGVSLMFALSMGIIGLWIGFFGCVFLQSLFFIILIYKLDWKKATQEA 487 The following BLAST results are available for this feature:
BLAST of CF509832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509832 ID=CF509832; Name=CF509832; organism=Citrus sinensis; type=EST; length=590bpback to top |