CF509834
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF509834 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 8.108e-42 Identity = 66/118 (55.93%), Postives = 88/118 (74.58%), Query Frame = 1 Query: 133 KIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQ-YYGRGPIQLTW 483 KIISR MF+ +L +RN+ CPA+GFYTYDAF+ AA++FP FG +G+ +RKRE+AAF QT HETTGGW AP G YAWGYC++++ +P+S+ PG+ YYGRGP+QL+W Sbjct: 4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSW 121 HSP 2 Score: 38.891 bits (89), Expect = 8.108e-42 Identity = 18/25 (72.00%), Postives = 20/25 (80.00%), Query Frame = 2 Query: 485 NCNYLRCGEALGVDLLNNPDLLATD 559 N NY CGEAL V+LL NPDL+ATD Sbjct: 122 NYNYGPCGEALRVNLLGNPDLVATD 146
BLAST of CF509834 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.232e-39 Identity = 74/132 (56.06%), Postives = 88/132 (66.67%), Query Frame = 1 Query: 88 GERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTW 483 G D G D G L II + F+ LL +RNDARCPA GFYTY+AFI AA+ FP FGN+G++ MRKREIAAF QT HETTGGW DAP G YAWGYCY+++++ QY GRGPIQL+W Sbjct: 76 GGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEINCQPYCDPSSNYQCVAGKQYCGRGPIQLSW 207 HSP 2 Score: 27.7202 bits (60), Expect = 1.232e-39 Identity = 12/25 (48.00%), Postives = 16/25 (64.00%), Query Frame = 2 Query: 485 NCNYLRCGEALGVDLLNNPDLLATD 559 N NY CG+ L + LL P+L+ TD Sbjct: 208 NYNYGLCGDDLKLPLLQEPELVETD 232
BLAST of CF509834 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.637e-39 Identity = 78/157 (49.68%), Postives = 102/157 (64.97%), Query Frame = 1 Query: 67 CGSGV-VCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIR-QVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWELQLLKVRRSLGGGLV 531 CG+ CG + G++G++I+R MF D+L +RN+ CP +GFYTYDAFI AA+AFPGFG +G+ T RKREIAAF AQT HETTGGW AP G YAWGYCY+R Q SP + +YYGRGPIQ+++ + +++G LV Sbjct: 44 CGNTADYCGSGCQSQCSSTGDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQAGKAIGVDLV 200
BLAST of CF509834 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 8.125e-39 Identity = 73/138 (52.90%), Postives = 96/138 (69.57%), Query Frame = 1 Query: 121 GELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQ-YYGRGPIQLTWELQLLKVRRSLGGGLV 531 G+L IISR F+D+L +RND CPARGFYTYDAFI AA++FPGFG +G+ RK+EIAAFF QT HETTGGW AP G Y+WGYC+ ++ +P+S+ G+ YYGRGP+QL+W + R++G L+ Sbjct: 69 GDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLL 206
BLAST of CF509834 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.386e-38 Identity = 75/157 (47.77%), Postives = 99/157 (63.06%), Query Frame = 1 Query: 67 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWELQLLKVRRSLGGGLVEQ 537 CG G C + G +L +ISR F+ +L +RND CPA+GFYTYDAFI AA+A+P FGN+G+ RKREIAAF QT HETTGGW AP G YAWGYC++R+ +P++ QYYGRGPIQ++W + R++G L+ + Sbjct: 58 CGPG--CQSQCGGPSPAPTDLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSTYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNK 212
BLAST of CF509834 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 4.032e-38 Identity = 76/162 (46.91%), Postives = 100/162 (61.73%), Query Frame = 1 Query: 67 CGS-----GVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWELQLLKVRRSLGGGLVEQ 537 CGS G C + G +L +ISR F+ +L +RND CPA+GFYTYDAFI AA+A+P FGN+G+ RKREIAAF QT HETTGGW AP G YAWGYC++R+ +P++ QYYGRGPIQ++W + R++G L+ + Sbjct: 50 CGSTTDYCGKDCQSQCGGPSPAPTDLSALISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNK 211
BLAST of CF509834 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 155.606 bits (392), Expect = 1.532e-37 Identity = 72/138 (52.17%), Postives = 94/138 (68.12%), Query Frame = 1 Query: 121 GELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPG-QYYGRGPIQLTWELQLLKVRRSLGGGLV 531 G+L IIS F+D+L +RNDA CPARGFYTY+AFI AA++FPGFG +G+ RK+E+AAFF QT HETTGGW AP G Y+WGYC+ ++ +PAS G +YYGRGP+QL+W R++G L+ Sbjct: 84 GDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLL 221
BLAST of CF509834 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 3.187e-37 Identity = 62/123 (50.41%), Postives = 83/123 (67.48%), Query Frame = 1 Query: 112 TDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLT 480 T GG++G+++ +F+ +L YRND RC GFYTYDAFI AA++F GFG +G++ +K+E+AAF AQT HETTGGW AP G YAWGYC++ + + +YYGRGPIQLT Sbjct: 75 TGGGDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPKDWPCAPGKKYYGRGPIQLT 197 HSP 2 Score: 32.7278 bits (73), Expect = 3.187e-37 Identity = 14/25 (56.00%), Postives = 19/25 (76.00%), Query Frame = 2 Query: 485 NCNYLRCGEALGVDLLNNPDLLATD 559 N NY G+A+ DL+NNPDLL+T+ Sbjct: 199 NYNYGLAGQAIKEDLINNPDLLSTN 223
BLAST of CF509834 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 9.932e-37 Identity = 78/158 (49.37%), Postives = 99/158 (62.66%), Query Frame = 1 Query: 67 CGSGVVCGERDTGHGTD--GGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPG-QYYGRGPIQLTWELQLLKVRRSLGGGLV 531 CG G C + G T GG+LG IIS MF+ +L +RND C +GFY+Y+AFI AA++FPGFG SG+ T RKREIAAFFAQT HETTGGW AP G YAWGYC++R+ PG +Y+GRGPIQ++ R++G L+ Sbjct: 54 CGPGN-CQSQCPGGPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLL 210
BLAST of CF509834 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 9.932e-37 Identity = 75/151 (49.67%), Postives = 97/151 (64.24%), Query Frame = 1 Query: 85 CGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTG--GWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWELQLLKVRRSLGGGLV 531 C + +G G D G L +I+RE F+ +L +RND CPARGFYTYDAFI AA++FP F +G++ RKRE+AAF AQT HETTG GW AP G Y WGYCY R+++PA QY+GRGP+QLTW + R++G L+ Sbjct: 58 CQSQCSGSGGDTGGLDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELNPADYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLL 207 The following BLAST results are available for this feature:
BLAST of CF509834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509834 ID=CF509834; Name=CF509834; organism=Citrus sinensis; type=EST; length=561bpback to top |