CF509838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF509838 vs. ExPASy Swiss-Prot
Match: SEC13_RAT (Protein SEC13 homolog OS=Rattus norvegicus GN=Sec13 PE=1 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 2.478e-52 Identity = 91/160 (56.88%), Postives = 115/160 (71.88%), Query Frame = 1 Query: 115 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTARADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 594 ++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAHP +G+ILASCSYD +VIIWKE N W + H + H SSVNS+ WAPH+ GL LACGSSDG IS+ T +G W+ +I+ AH +G +VSWAPA+ PG+ Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166
BLAST of CF509838 vs. ExPASy Swiss-Prot
Match: SEC13_MOUSE (Protein SEC13 homolog OS=Mus musculus GN=Sec13 PE=2 SV=3) HSP 1 Score: 204.912 bits (520), Expect = 2.478e-52 Identity = 91/160 (56.88%), Postives = 115/160 (71.88%), Query Frame = 1 Query: 115 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTARADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 594 ++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAHP +G+ILASCSYD +VIIWKE N W + H + H SSVNS+ WAPH+ GL LACGSSDG IS+ T +G W+ +I+ AH +G +VSWAPA+ PG+ Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166
BLAST of CF509838 vs. ExPASy Swiss-Prot
Match: SEC13_HUMAN (Protein SEC13 homolog OS=Homo sapiens GN=SEC13 PE=1 SV=3) HSP 1 Score: 202.986 bits (515), Expect = 9.417e-52 Identity = 90/160 (56.25%), Postives = 115/160 (71.88%), Query Frame = 1 Query: 115 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTARADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 594 ++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAHP +G+ILASCSYD +VIIW+E N W ++H H SSVNS+ WAPH+ GL LACGSSDG IS+ T +G W+ +I+ AH +G +VSWAPA+ PG+ Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN-GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166
BLAST of CF509838 vs. ExPASy Swiss-Prot
Match: SEC13_BOVIN (Protein SEC13 homolog OS=Bos taurus GN=SEC13 PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.098e-51 Identity = 91/160 (56.88%), Postives = 113/160 (70.62%), Query Frame = 1 Query: 115 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTARADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 594 ++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAHP +G+ILASCSYD +VIIWKE N W + H H SSVNS+ WAPH+ GL LACGSSDG IS+ T G W+ +I+ AH +G +VSWAPA+ PG+ Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166
BLAST of CF509838 vs. ExPASy Swiss-Prot
Match: SEC13_DICDI (Protein transport protein SEC13 OS=Dictyostelium discoideum GN=sec13 PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 4.374e-49 Identity = 89/163 (54.60%), Postives = 110/163 (67.48%), Query Frame = 1 Query: 100 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTARADGGWDTTRIDQAHPVGVTSVSWAPAMAP 588 M Q +++GHED VHD D+YGK LAT SSD IKI + QHL L+GH GPVWQVAWAHPKFG ILAS SYD +VI+WKE N W+ H + H+ SVNSI+WAPHE GLSLAC SSDG++++ + W+ + Q +GV SVSW+PA P Sbjct: 1 MATQNVDSGHEDMVHDAQFDYYGKFLATCSSDKMIKIFDVGGENPQHLVDLRGHEGPVWQVAWAHPKFGKILASASYDRKVIVWKEVGNNSWSIIHQYAGHELSVNSISWAPHEFGLSLACASSDGSVTIHNYN-NNVWEAPQKIQVSQIGVNSVSWSPAAIP 162
BLAST of CF509838 vs. ExPASy Swiss-Prot
Match: SEC13_USTMA (Protein transport protein SEC13 OS=Ustilago maydis GN=SEC13 PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.171e-48 Identity = 98/186 (52.69%), Postives = 118/186 (63.44%), Query Frame = 1 Query: 109 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLA-TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE-------------GNQN----------DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTARADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 594 + IET HED VHD +DFYGKRLAT SSD ++K+ + N A TL GH+GPVWQVAWAHP FG ILASCSYDG+V+IWK+ G+Q+ WT+ H +SVNSI+WAPHELG LAC SSDGN+SV T DG W + AHPVG +VSWAPA+ PG+ Sbjct: 19 KNIETQHEDMVHDAQLDFYGKRLATCSSDRTVKVFDIVNGTPSTTAETLHGHQGPVWQVAWAHPTFGDILASCSYDGKVVIWKDNGAGASIGASAPYGSQSAYGAPTSSAGGWTKIKEHTLHTASVNSISWAPHELGSILACASSDGNVSVLTFNNDGTWAVDLV-AAHPVGCNAVSWAPAVVPGS 203
BLAST of CF509838 vs. ExPASy Swiss-Prot
Match: SEC13_COCIM (Protein transport protein SEC13 OS=Coccidioides immitis GN=SEC13 PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 6.984e-47 Identity = 90/163 (55.21%), Postives = 116/163 (71.17%), Query Frame = 1 Query: 121 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQ-----NDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTARADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 594 +GH+D +HD MD+YG+RLAT SSD +IKI L + + + TLKGH G VW VAWAHPKFG+ILAS SYDG+V+IW+E + + W++ F+ H +SVN ++WAPHELG LAC SSDG++SV R D W T +I AH +GV SVSWAPA APG+ Sbjct: 8 SGHDDMIHDAGMDYYGRRLATCSSDKTIKIFELEGDSHRLIETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQSSAASTGSSWSRVFDFSLHTASVNMVSWAPHELGCVLACASSDGHVSVLEFR-DNSW-THQIFHAHGMGVNSVSWAPAAAPGS 168
BLAST of CF509838 vs. ExPASy Swiss-Prot
Match: SEC13_ASPNC (Protein transport protein sec13 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sec13 PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 2.654e-46 Identity = 92/174 (52.87%), Postives = 119/174 (68.39%), Query Frame = 1 Query: 100 MPAQKIE-TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQN--------DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTARADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 594 M AQ I +GH++ +HD +D+YG+RLAT SSD +IKI + + + TLKGH G VW VAWAHPKFG+ILAS SYDG+V+IW+E +QN WT+ F+ H +SVN ++WAPHE G LAC SSDG++SV R D W T +I AH +GV S+SWAPA APG+ Sbjct: 1 MAAQVISNSGHDEMIHDAGLDYYGRRLATCSSDKTIKIFEIEGETHRLIETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQHQNATSPVAGGAWTKVFDFSLHTASVNMVSWAPHESGCLLACASSDGHVSVLEFR-DNSW-THQIFHAHGMGVNSISWAPAAAPGS 172
BLAST of CF509838 vs. ExPASy Swiss-Prot
Match: SEC13_EMENI (Protein transport protein sec13 OS=Emericella nidulans GN=sec13 PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 3.466e-46 Identity = 88/166 (53.01%), Postives = 115/166 (69.28%), Query Frame = 1 Query: 121 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND--------WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTARADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 594 +GH+D +HD +D+YG+RLAT SSD +IKI + + + TLKGH GPVW V WAHPKFG+ILAS SYDG+V+IW+E +Q+ WT+ F+ H +SVN I+WAPHE G LAC SSDG++SV R D W T +I AH +GV S+SWAPA +PG+ Sbjct: 10 SGHDDMIHDAGLDYYGRRLATCSSDKTIKIFEIEGDTHKLVETLKGHEGPVWCVEWAHPKFGTILASSSYDGKVLIWREQHQSSTAPIGSGAWTKVFDFSLHTASVNMISWAPHETGCLLACASSDGHVSVLEFR-DNSW-THQIFHAHGMGVNSISWAPAASPGS 173
BLAST of CF509838 vs. ExPASy Swiss-Prot
Match: SEC13_ASPTN (Protein transport protein sec13 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=sec13 PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 3.466e-46 Identity = 88/166 (53.01%), Postives = 115/166 (69.28%), Query Frame = 1 Query: 121 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND--------WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTARADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 594 +GHED +HD +D+YG+RLAT SSD +IK+ + A + + TLKGH G VW VAWAHPKFG+ILAS SYDG+V+IW+E +QN WT+ F+ H +SVN ++WAPHE G L C SSDG++SV + D W T +I AH +GV S+SWAPA APG+ Sbjct: 10 SGHEDMIHDAGLDYYGRRLATCSSDKTIKVFEIEGEAHRLVETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQHQNTTSPAAGSAWTKVFDFSLHTASVNMVSWAPHESGCLLGCASSDGHVSVLEFQ-DNSW-THQIFHAHGMGVNSISWAPAAAPGS 173 The following BLAST results are available for this feature:
BLAST of CF509838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509838 ID=CF509838; Name=CF509838; organism=Citrus sinensis; type=EST; length=594bpback to top |