CF509846

Overview
NameCF509846
Unique NameCF509846
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length306
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9355 contig Csv1_Contig9355:462..767. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF509846 vs. ExPASy Swiss-Prot
Match: APY_SOLTU (Apyrase OS=Solanum tuberosum GN=RROP1 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 6.736e-20
Identity = 43/102 (42.16%), Postives = 62/102 (60.78%), Query Frame = 1 
Query:    1 VNDTCTHMQCTFXXXXXXXXXXXQKNMFVASFFFDRAAEAGFIDQNEPVAKVRPGDFESAAKRACQTKLEDAKSIYPRVDESNLPYICMDLVYQHALLVVGF 306
            +N  C   +CTF           QKN+  +SFF+D  A+ G +D   P A  +P  + +AAK ACQT + D KSI+P+  + N+PY+CMDL+Y++ LLV GF
Sbjct:  307 INAKCNIEECTFNGVWNGGGGDGQKNIHASSFFYDIGAQVGIVDTKFPSALAKPIQYLNAAKVACQTNVADIKSIFPKTQDRNIPYLCMDLIYEYTLLVDGF 408
[Close]
BLAST of CF509846 vs. ExPASy Swiss-Prot
Match: NTPA_PEA (Nucleoside-triphosphatase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.075e-17
Identity = 44/103 (42.72%), Postives = 59/103 (57.28%), Query Frame = 1 
Query:    1 VNDTCTHMQCTFXXXXXXXXXXXQKNMFVASFFFDRAAEAGFIDQNEPVAKVRPGDFESAAKRACQTKLEDAKSIYPRVDESNL-PYICMDLVYQHALLVVGF 306
            +N  C +  CTF           QKN+F +S FF    + G +D + P   +RP D E+ AK AC    EDAKS YP +D+ N+  Y+CMDL+YQ+ LLV GF
Sbjct:  306 LNYPCPYQNCTFGGIWNGGGGNGQKNLFASSSFFYLPEDTGMVDASTPNFILRPVDIETKAKEACALNFEDAKSTYPFLDKKNVASYVCMDLIYQYVLLVDGF 408
The following BLAST results are available for this feature:
BLAST of CF509846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
APY_SOLTU6.736e-2042.16Apyrase OS=Solanum tuberosum GN=RROP1 PE=1 SV=2[more]
NTPA_PEA1.075e-1742.72Nucleoside-triphosphatase OS=Pisum sativum PE=2 SV... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-354 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-82_B04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509846 ID=CF509846; Name=CF509846; organism=Citrus sinensis; type=EST; length=306bp
GTTAATGATACTTGTACTCACATGCAGTGCACATTCGGTGGAGTATGGAA
CGGCGGAGGTGGTGATGGACAAAAAAATATGTTTGTGGCTTCATTTTTCT
TTGACAGGGCTGCCGAGGCTGGTTTTATTGACCAAAATGAACCCGTTGCC
AAAGTTCGTCCTGGTGATTTTGAGTCTGCAGCTAAGCGTGCCTGCCAAAC
TAAACTTGAGGACGCAAAATCCATATATCCACGTGTGGATGAGAGCAATC
TGCCGTACATATGCATGGATCTTGTCTACCAGCATGCATTGCTTGTAGTC
GGATTT
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