CF509852

Overview
NameCF509852
Unique NameCF509852
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length474
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6949 contig Csv1_Contig6949:74..547. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF509852 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 2.322e-34
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 3
Query:  228 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLV 428
            MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLV
Sbjct:    1 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLV 67          
BLAST of CF509852 vs. ExPASy Swiss-Prot
Match: INO1_TOBAC (Inositol-3-phosphate synthase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 6.992e-31
Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 3
Query:  228 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLV 428
            MFIENFKVESPNVKYT+ EIHSVYDY+TTELVHE +NGTYQW VKPKTVKYEFKTDVHVPKLGVMLV
Sbjct:    1 MFIENFKVESPNVKYTESEIHSVYDYQTTELVHEEKNGTYQWTVKPKTVKYEFKTDVHVPKLGVMLV 67          
BLAST of CF509852 vs. ExPASy Swiss-Prot
Match: INO1_SESIN (Inositol-3-phosphate synthase OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.558e-30
Identity = 61/67 (91.04%), Postives = 65/67 (97.01%), Query Frame = 3
Query:  228 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLV 428
            MFIE+FKVESPNVKYT+ EIHSVY+YETTELVHE+RNGTYQWIVKPKTVKYEFKTD HVPKLGVMLV
Sbjct:    1 MFIESFKVESPNVKYTEGEIHSVYNYETTELVHESRNGTYQWIVKPKTVKYEFKTDTHVPKLGVMLV 67          
BLAST of CF509852 vs. ExPASy Swiss-Prot
Match: INO1_NICPA (Inositol-3-phosphate synthase OS=Nicotiana paniculata GN=INPS1 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.558e-30
Identity = 60/67 (89.55%), Postives = 64/67 (95.52%), Query Frame = 3
Query:  228 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLV 428
            MFIENFKVESPNVKYT+ EIHSVYDY+TTELVH+ +NGTYQW VKPKTVKYEFKTDVHVPKLGVMLV
Sbjct:    1 MFIENFKVESPNVKYTESEIHSVYDYQTTELVHDEKNGTYQWTVKPKTVKYEFKTDVHVPKLGVMLV 67          
BLAST of CF509852 vs. ExPASy Swiss-Prot
Match: INO1_WHEAT (Inositol-3-phosphate synthase OS=Triticum aestivum GN=MIPS PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 2.657e-30
Identity = 59/67 (88.06%), Postives = 65/67 (97.01%), Query Frame = 3
Query:  228 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLV 428
            MFIE+FKVESPNVKYT++EIHSVYDYETTE+VHENRNGTYQW+VKPKTVKY+FKTD  VPKLGVMLV
Sbjct:    1 MFIESFKVESPNVKYTENEIHSVYDYETTEVVHENRNGTYQWVVKPKTVKYDFKTDTRVPKLGVMLV 67          
BLAST of CF509852 vs. ExPASy Swiss-Prot
Match: INO3_ARATH (Probable inositol-3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.010e-29
Identity = 58/67 (86.57%), Postives = 64/67 (95.52%), Query Frame = 3
Query:  228 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLV 428
            MFIE+FKVESPNVKYT++EIHSVYDY+TTELVHEN+NG +QW VKPKTVKYEFKTD HVPKLGVMLV
Sbjct:    1 MFIESFKVESPNVKYTENEIHSVYDYQTTELVHENKNGAFQWTVKPKTVKYEFKTDTHVPKLGVMLV 67          
BLAST of CF509852 vs. ExPASy Swiss-Prot
Match: INO2_ARATH (Inositol-3-phosphate synthase isozyme 2 OS=Arabidopsis thaliana GN=At2g22240 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 1.722e-29
Identity = 58/67 (86.57%), Postives = 65/67 (97.01%), Query Frame = 3
Query:  228 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLV 428
            MFIE+FKVESPNVKYT++EI+SVYDYETTE+VHENRNGTYQW+VKPKTVKY+FKTD  VPKLGVMLV
Sbjct:    1 MFIESFKVESPNVKYTENEINSVYDYETTEVVHENRNGTYQWVVKPKTVKYDFKTDTRVPKLGVMLV 67          
BLAST of CF509852 vs. ExPASy Swiss-Prot
Match: INO1_BRANA (Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 2.487e-28
Identity = 57/67 (85.07%), Postives = 62/67 (92.54%), Query Frame = 3
Query:  228 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLV 428
            MFIE+FKVESPNVKYT++EIHSVYDYETTE+VHEN NG YQWIVKPK VKY+FKTD  VPKLGVMLV
Sbjct:    1 MFIESFKVESPNVKYTENEIHSVYDYETTEVVHENVNGAYQWIVKPKVVKYDFKTDTRVPKLGVMLV 67          
BLAST of CF509852 vs. ExPASy Swiss-Prot
Match: INO1_PHAVU (Inositol-3-phosphate synthase OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 5.540e-28
Identity = 58/68 (85.29%), Postives = 64/68 (94.12%), Query Frame = 3
Query:  228 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENR-NGTYQWIVKPKTVKYEFKTDVHVPKLGVMLV 428
            MFIE+FKVESPNVKYT++EIHSVYDYETTE+VHE   NGTYQWIVKPKTVKY+FKTD+ VPKLGVMLV
Sbjct:    1 MFIESFKVESPNVKYTENEIHSVYDYETTEVVHEKTVNGTYQWIVKPKTVKYDFKTDIRVPKLGVMLV 68          
BLAST of CF509852 vs. ExPASy Swiss-Prot
Match: INO1_ARATH (Inositol-3-phosphate synthase isozyme 1 OS=Arabidopsis thaliana GN=At4g39800 PE=2 SV=3)

HSP 1 Score: 123.25 bits (308), Expect = 5.540e-28
Identity = 58/68 (85.29%), Postives = 64/68 (94.12%), Query Frame = 3
Query:  228 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENR-NGTYQWIVKPKTVKYEFKTDVHVPKLGVMLV 428
            MFIE+FKVESPNVKYT++EIHSVYDYETTE+VHE   NGTYQWIVKPKTVKY+FKTD+ VPKLGVMLV
Sbjct:    1 MFIESFKVESPNVKYTENEIHSVYDYETTEVVHEKTVNGTYQWIVKPKTVKYDFKTDIRVPKLGVMLV 68          
The following BLAST results are available for this feature:
BLAST of CF509852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
INO1_CITPA2.322e-34100.00Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO1_TOBAC6.992e-3191.04Inositol-3-phosphate synthase OS=Nicotiana tabacum... [more]
INO1_SESIN1.558e-3091.04Inositol-3-phosphate synthase OS=Sesamum indicum P... [more]
INO1_NICPA1.558e-3089.55Inositol-3-phosphate synthase OS=Nicotiana panicul... [more]
INO1_WHEAT2.657e-3088.06Inositol-3-phosphate synthase OS=Triticum aestivum... [more]
INO3_ARATH1.010e-2986.57Probable inositol-3-phosphate synthase isozyme 3 O... [more]
INO2_ARATH1.722e-2986.57Inositol-3-phosphate synthase isozyme 2 OS=Arabido... [more]
INO1_BRANA2.487e-2885.07Inositol-3-phosphate synthase OS=Brassica napus PE... [more]
INO1_PHAVU5.540e-2885.29Inositol-3-phosphate synthase OS=Phaseolus vulgari... [more]
INO1_ARATH5.540e-2885.29Inositol-3-phosphate synthase isozyme 1 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-360 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-82_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509852 ID=CF509852; Name=CF509852; organism=Citrus sinensis; type=EST; length=474bp
GAGAGAGAGTGGGAAGTGAGAATTGAGAAGGAGAGTTGAGTTCGGAGACA
GCAAGACGAAACAGCTCTTCTTCCAATAAATCTCAAAAGCATTTGTTTGG
TTTTATTTAAAGCAATTTTCTCAGCAAACTCTTCTTCTAATAAATTTTAA
AGCATTTGTTTGGTTTTTATTTAAAGCAATTTTCTCAGCGAAGTTTTCAA
TTTTTTCTCTAAAATTTTCCTGGGAAAATGTTTATCGAAAATTTCAAGGT
TGAGAGCCCAAATGTGAAGTACACAGATCATGAGATTCACTCTGTGTACG
ATTATGAAACCACTGAGCTTGTTCATGAGAACAGAAATGGCACTTATCAG
TGGATTGTCAAGCCCAAAACTGTCAAATATGAGTTCAAAACCGATGTTCA
TGTCCCTAAACTTGGGGTTATGCTTGTGGGTTGGGGTGGAAACAACGGCT
CAACTCTCACGGGTGGTGGTATCT
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