CF509856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF509856 vs. ExPASy Swiss-Prot
Match: SUGT1_DICDI (Protein SUGT1 homolog OS=Dictyostelium discoideum GN=sugt1 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.271e-14 Identity = 55/192 (28.65%), Postives = 86/192 (44.79%), Query Frame = 2 Query: 98 FIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE---------------TGELQKQPLETGPTNVVSTNNVQPAT---------NISSTEDVETVMDVSNEAAMAAPARPKYRHEFYQ 601 F+D+ ++ A Y +A N+AE F R+Q KL N EA++D N +I+L+ + SK Y +K C +LEE++TA EKG S+ +S F I++ + I T Q T PT + +T+N T N ++ + T D + + K RHE+YQ Sbjct: 11 FVDEQYDEALKCYDKACLELSNNAEAFFKRSQCHSKLSNLKEALSDINTSIKLDSNNSKYYLKKGQLCFELEEFDTALKTFEKGQSIDSENSSFKTWIRKSKAEIQSNPTTTTTTTPTPTPTPTPAPQPVTTTTNPTPIPTTSNTTTTTNNNNNNNNNNNNNNNNNNTTTDSTTTKLPIPSSGNKVRHEWYQ 202
BLAST of CF509856 vs. ExPASy Swiss-Prot
Match: PPP5_SOLLC (Serine/threonine-protein phosphatase 5 OS=Solanum lycopersicum GN=PP5 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.132e-13 Identity = 36/100 (36.00%), Postives = 60/100 (60.00%), Query Frame = 2 Query: 113 FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 412 + A DLY+QAIE++ +A +A+RA A KL+ + A+ D RAIE++P SK Y+R+ A + + +++ A ++ L P D T +KECE+ + Sbjct: 30 YSQAIDLYTQAIELNGENAVYYANRAFAHTKLEEYGSAIQDGTRAIEIDPRYSKGYYRRGAAYLAMGKFKDALKDFQQVKKLCPNDPDATKKLKECEKAV 129
BLAST of CF509856 vs. ExPASy Swiss-Prot
Match: SGTB_RAT (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Rattus norvegicus GN=Sgtb PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.090e-13 Identity = 46/161 (28.57%), Postives = 83/161 (51.55%), Query Frame = 2 Query: 104 DDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEETGELQKQPLETGPTNVVST--NN---VQPATNISSTEDVETVMDVSNEAAMAAPA 571 ++ + A D Y+QAIE+ PN+A + +RA A KL ++T+A+ D +AI ++ SKAY R A + ++E A + +K L P + + + +K E+++ E + P TG T +++ NN + A ++ V+ +M A+ PA Sbjct: 98 EENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDLDPENDSYKSNLKIAEQKLREVS-----SPTGTGLTFDMASLINNPAFITMAASLMQNPQVQQLMSGMMTNAIGGPA 253
BLAST of CF509856 vs. ExPASy Swiss-Prot
Match: SGTB_HUMAN (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Homo sapiens GN=SGTB PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.112e-13 Identity = 46/161 (28.57%), Postives = 83/161 (51.55%), Query Frame = 2 Query: 104 DDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEETGELQKQPLETGPTNVVST--NN---VQPATNISSTEDVETVMDVSNEAAMAAPA 571 ++ + A D Y+QAIE+ PN+A + +RA A KL ++T+A+ D +AI ++ SKAY R A L ++E A + +K L P + + + +K E+++ E + P TG + +++ NN + A ++ V+ +M A+ PA Sbjct: 98 EENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLGHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTALNKFEEAVTSYQKALDLDPENDSYKSNLKIAEQKLREVS-----SPTGTGLSFDMASLINNPAFISMAASLMQNPQVQQLMSGMMTNAIGGPA 253
BLAST of CF509856 vs. ExPASy Swiss-Prot
Match: SGTB_MOUSE (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Mus musculus GN=Sgtb PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.190e-12 Identity = 45/161 (27.95%), Postives = 83/161 (51.55%), Query Frame = 2 Query: 104 DDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEETGELQKQPLETGPTNVVST--NN---VQPATNISSTEDVETVMDVSNEAAMAAPA 571 ++ + A D Y+QAIE+ PN+A + +RA A KL ++T+A+ D +AI ++ SKAY R A + ++E A + +K L P + + + +K E+++ E + P TG + +++ NN + A ++ V+ +M A+ PA Sbjct: 98 EENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDLDPENDSYKSNLKIAEQKLREVS-----SPTGTGLSFDMASLINNPAFITMAASLMQNPQVQQLMSGMMTNAIGGPA 253
BLAST of CF509856 vs. ExPASy Swiss-Prot
Match: PPP5_ARATH (Serine/threonine-protein phosphatase 5 OS=Arabidopsis thaliana GN=PAPP5 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.554e-12 Identity = 35/100 (35.00%), Postives = 63/100 (63.00%), Query Frame = 2 Query: 113 FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 412 + A DLY++AIE++ N+A +A+RA A KL+ + A+ DA++AIE++ SK Y+R+ A + + +++ A ++ L+P D T +KECE+ + Sbjct: 29 YSSAIDLYTKAIELNSNNAVYWANRAFAHTKLEEYGSAIQDASKAIEVDSRYSKGYYRRGAAYLAMGKFKDALKDFQQVKRLSPNDPDATRKLKECEKAV 128
BLAST of CF509856 vs. ExPASy Swiss-Prot
Match: PPT1_SCHPO (Serine/threonine-protein phosphatase T OS=Schizosaccharomyces pombe GN=ppt1 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 4.522e-12 Identity = 35/97 (36.08%), Postives = 63/97 (64.95%), Query Frame = 2 Query: 122 AYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 412 A DLY++AIE+ +A L+++R+ A +K +++ A+ DA++AIE +P +KAY+R+ATA + + + + A K +LAP D ++ECE+ + Sbjct: 24 AIDLYTKAIELDSTNAILYSNRSLAHLKSEDYGLAINDASKAIECDPEYAKAYFRRATAHIAIFQPKEAVGDFRKALALAPSDPAARKKLRECEQLV 120
BLAST of CF509856 vs. ExPASy Swiss-Prot
Match: SGTA_BOVIN (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Bos taurus GN=SGTA PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.828e-11 Identity = 39/102 (38.24%), Postives = 54/102 (52.94%), Query Frame = 2 Query: 113 FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 418 FE A Y +AIE++P +A F +RA A KL N+ AV D RAI ++PS SKAY R A L ++ A K L P + + + +K E R+ E Sbjct: 107 FEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPSYSKAYGRMGLALSSLNKHTEAVAYYRKALELDPDNETYKSNLKVAELRLRE 208
BLAST of CF509856 vs. ExPASy Swiss-Prot
Match: SGTA_RAT (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus norvegicus GN=Sgta PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.000e-11 Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = 2 Query: 113 FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 418 FE A LY +AIE++P +A F +RA A KL N+ AV D RAI ++P SKAY R A L ++ A +K L P + + + +K E ++ E Sbjct: 107 FEAAVHLYGKAIELNPANAVYFCNRAAAYSKLGNYVGAVQDCERAIGIDPGYSKAYGRMGLALSSLNKHAEAVAYYKKALELDPDNDTYKSNLKIAELKLRE 208
BLAST of CF509856 vs. ExPASy Swiss-Prot
Match: SGTA_MOUSE (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus GN=Sgta PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.000e-11 Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = 2 Query: 113 FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 418 FE A LY +AIE++P +A F +RA A KL N+ AV D RAI ++P SKAY R A L ++ A +K L P + + + +K E ++ E Sbjct: 108 FEAAVHLYGKAIELNPANAVYFCNRAAAYSKLGNYVGAVQDCERAIGIDPGYSKAYGRMGLALSSLNKHAEAVAYYKKALELDPDNDTYKSNLKIAELKLRE 209 The following BLAST results are available for this feature:
BLAST of CF509856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509856 ID=CF509856; Name=CF509856; organism=Citrus sinensis; type=EST; length=612bpback to top |