CF509879

Overview
NameCF509879
Unique NameCF509879
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length468
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5385 contig Csv1_Contig5385:197..665. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF509879 vs. ExPASy Swiss-Prot
Match: BCAT3_ARATH (Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.229e-50
Identity = 94/123 (76.42%), Postives = 106/123 (86.18%), Query Frame = 1
Query:   73 SVSSHTLSNETIQLADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDG-NILLFRPEENAMRMQVGAERMCMPSPSVQQFVEAVKATVLA 438
            +VSS++ S    +LADIDWD +GFG  P DYMYVMKC  DG FSKGELQRFGNIE+SPS+GVLNYGQGLFEGLKAYRK+DG NILLFRPEENA RM+ GAERMCMP+P+V+QFVEAV  TVLA
Sbjct:   63 AVSSNSSSTLVTELADIDWDTVGFGLKPADYMYVMKCNIDGEFSKGELQRFGNIEISPSAGVLNYGQGLFEGLKAYRKKDGNNILLFRPEENAKRMRNGAERMCMPAPTVEQFVEAVTETVLA 185          

HSP 2 Score: 28.8758 bits (63), Expect = 3.229e-50
Identity = 9/11 (81.82%), Postives = 11/11 (100.00%), Query Frame = 3
Query:  435 SNKRWIPPPGK 467
            +NKRW+PPPGK
Sbjct:  185 ANKRWVPPPGK 195          
BLAST of CF509879 vs. ExPASy Swiss-Prot
Match: BCAT5_ARATH (Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 7.152e-50
Identity = 90/122 (73.77%), Postives = 106/122 (86.89%), Query Frame = 1
Query:   73 SVSSHTLSNETIQLADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVQQFVEAVKATVLA 438
            +VSS T   +  +LA+IDWD + FG  PTDYMY MKC RDG FS+G+LQ FGNI+++P++GVLNYGQGLFEGLKAYRKQDGNILLFRPEENA+RM+ GAERMCMPSP+V+QFVEAVK TVLA
Sbjct:   68 AVSSST--TDVTELAEIDWDKIDFGLKPTDYMYAMKCSRDGEFSQGQLQPFGNIDINPAAGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAIRMRNGAERMCMPSPTVEQFVEAVKTTVLA 187          

HSP 2 Score: 29.261 bits (64), Expect = 7.152e-50
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 3
Query:  435 SNKRWIPPPGK 467
            +NKRWIPPPGK
Sbjct:  187 ANKRWIPPPGK 197          
BLAST of CF509879 vs. ExPASy Swiss-Prot
Match: BCAT2_ARATH (Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 9.698e-43
Identity = 76/108 (70.37%), Postives = 92/108 (85.19%), Query Frame = 1
Query:  115 ADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVQQFVEAVKATVLA 438
            AD+DWDNLGFG  P DYMYVMKC +DG F++GEL  +GNI+LSPS+GVLNYGQ ++EG KAYRK++G +LLFRP+ NA+RM++GAERM MPSPSV QFV AVK T LA
Sbjct:   54 ADLDWDNLGFGLNPADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALA 161          

HSP 2 Score: 25.7942 bits (55), Expect = 9.698e-43
Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3
Query:  435 SNKRWIPPPGK 467
            +NKRW+PP GK
Sbjct:  161 ANKRWVPPAGK 171          
BLAST of CF509879 vs. ExPASy Swiss-Prot
Match: BCAT1_ARATH (Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 1.050e-41
Identity = 75/113 (66.37%), Postives = 91/113 (80.53%), Query Frame = 1
Query:  100 ETIQLADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVQQFVEAVKATVLA 438
            E  + AD+DWDNLGF    TD+M+  K  RDGNF +G L R+GNIEL+P++G+LNYGQGL EG+KAYR +DG +LLFRPE NAMRM++GAERMCM SPSV QF+E VK TVLA
Sbjct:   45 EDEEYADVDWDNLGFSLVRTDFMFATKSCRDGNFEQGYLSRYGNIELNPAAGILNYGQGLIEGMKAYRGEDGRVLLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLA 157          

HSP 2 Score: 27.7202 bits (60), Expect = 1.050e-41
Identity = 8/11 (72.73%), Postives = 11/11 (100.00%), Query Frame = 3
Query:  435 SNKRWIPPPGK 467
            +N+RW+PPPGK
Sbjct:  157 ANRRWVPPPGK 167          
BLAST of CF509879 vs. ExPASy Swiss-Prot
Match: BCAT7_ARATH (Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 2.260e-38
Identity = 70/110 (63.64%), Postives = 87/110 (79.09%), Query Frame = 1
Query:  115 ADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVQQFVEAVKATVLATN 444
            A++ WD LGF   PTDYMYV KC +  +FS GE+  +G+I +SP +G+LNYGQGLFEGLKAYR +DG I LFRP++NA+RMQ GA+R+CM  PS +QFVEAVK TVLA N
Sbjct:   22 ANVKWDELGFALVPTDYMYVAKCKQGESFSTGEIVPYGDISISPCAGILNYGQGLFEGLKAYRTEDGRITLFRPDQNAIRMQTGADRLCMTPPSPEQFVEAVKQTVLANN 131          

HSP 2 Score: 25.7942 bits (55), Expect = 2.260e-38
Identity = 7/11 (63.64%), Postives = 10/11 (90.91%), Query Frame = 3
Query:  435 SNKRWIPPPGK 467
            +N +W+PPPGK
Sbjct:  129 ANNKWVPPPGK 139          
BLAST of CF509879 vs. ExPASy Swiss-Prot
Match: BCAT6_ARATH (Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.290e-35
Identity = 65/117 (55.56%), Postives = 88/117 (75.21%), Query Frame = 1
Query:   88 TLSNETIQLADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVQQFVEAVKATVLA 438
            T S    + A++ W+ LGF   P DYMYV KC +  +F++G++  +G+I +SP S +LNYGQGLFEGLKAYR +D  I +FRP++NA+RMQ GAER+CM  P+++QFVEAVK TVLA
Sbjct:   10 TTSETDEKYANVKWEELGFALTPIDYMYVAKCRQGESFTQGKIVPYGDISISPCSPILNYGQGLFEGLKAYRTEDDRIRIFRPDQNALRMQTGAERLCMTPPTLEQFVEAVKQTVLA 126          

HSP 2 Score: 27.7202 bits (60), Expect = 1.290e-35
Identity = 8/11 (72.73%), Postives = 11/11 (100.00%), Query Frame = 3
Query:  435 SNKRWIPPPGK 467
            +NK+W+PPPGK
Sbjct:  126 ANKKWVPPPGK 136          
BLAST of CF509879 vs. ExPASy Swiss-Prot
Match: BCAT4_ARATH (Probable branched-chain-amino-acid aminotransferase 4 OS=Arabidopsis thaliana GN=BCAT4 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.575e-32
Identity = 58/108 (53.70%), Postives = 79/108 (73.15%), Query Frame = 1
Query:  115 ADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVQQFVEAVKATVLA 438
            A++ W+ L F F  TDYMYV KC    +F +G++  F +++L+P + VL YGQGL+EGLKAYR +DG ILLFRP++N +R+Q GA+R+ MP PSV QFV A+K   LA
Sbjct:   18 ANVKWEELAFKFVRTDYMYVAKCNHGESFQEGKILPFADLQLNPCAAVLQYGQGLYEGLKAYRTEDGRILLFRPDQNGLRLQAGADRLYMPYPSVDQFVSAIKQVALA 125          

HSP 2 Score: 28.1054 bits (61), Expect = 3.575e-32
Identity = 9/11 (81.82%), Postives = 11/11 (100.00%), Query Frame = 3
Query:  435 SNKRWIPPPGK 467
            +NK+WIPPPGK
Sbjct:  125 ANKKWIPPPGK 135          
BLAST of CF509879 vs. ExPASy Swiss-Prot
Match: ILVE_HELPJ (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori J99 GN=ilvE PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 6.428e-21
Identity = 50/109 (45.87%), Postives = 70/109 (64.22%), Query Frame = 1
Query:  112 LADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVQQFVEAVKATVLA 438
            L ++DW NLGF +  TD+ ++    ++G++S+GEL     ++LS  S VL+YGQ  FEGLKAYR Q G  LLFRP ENA R+Q   ER+ MP  S + F++A    + A
Sbjct:    4 LENLDWKNLGFSYIKTDFRFIATY-KNGSWSQGELVSENALQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLKACAEVIKA 111          
BLAST of CF509879 vs. ExPASy Swiss-Prot
Match: ILVE_HAEIN (Branched-chain-amino-acid aminotransferase OS=Haemophilus influenzae GN=ilvE PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 3.190e-20
Identity = 49/109 (44.95%), Postives = 68/109 (62.39%), Query Frame = 1
Query:  112 LADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVQQFVEAVKATVLA 438
            + D+DW+NLGF +  TDY ++    +DG + +G+L     + +   S  L+YGQ  FEGLKAYR +DG+I LFRP+ NA RMQ  A+R+ MP    + FV A K  V A
Sbjct:    1 MKDLDWNNLGFSYIKTDYRFIAHW-KDGKWDEGKLTTDSTLHIHEGSTALHYGQQCFEGLKAYRCKDGSINLFRPQANAERMQRTADRLLMPRVPTELFVRACKEVVKA 108          
BLAST of CF509879 vs. ExPASy Swiss-Prot
Match: ILVE_HELPY (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori GN=ilvE PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 4.167e-20
Identity = 50/109 (45.87%), Postives = 68/109 (62.39%), Query Frame = 1
Query:  112 LADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVQQFVEAVKATVLA 438
            L ++DW NLGF +  TD+ ++    ++G++S+G L     ++LS  S VL+YGQ  FEGLKAYR Q G  LLFRP ENA R+Q   ER+ MP  S + F+ A    V A
Sbjct:    4 LENLDWKNLGFSYIKTDFRFIATY-KNGSWSQGGLVSENMLQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLRACAEVVKA 111          
The following BLAST results are available for this feature:
BLAST of CF509879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
BCAT3_ARATH3.229e-5076.42Branched-chain-amino-acid aminotransferase 3, chlo... [more]
BCAT5_ARATH7.152e-5073.77Branched-chain-amino-acid aminotransferase 5, chlo... [more]
BCAT2_ARATH9.698e-4370.37Branched-chain-amino-acid aminotransferase 2, chlo... [more]
BCAT1_ARATH1.050e-4166.37Branched-chain-amino-acid aminotransferase 1, mito... [more]
BCAT7_ARATH2.260e-3863.64Putative branched-chain-amino-acid aminotransferas... [more]
BCAT6_ARATH1.290e-3555.56Branched-chain-amino-acid aminotransferase 6 OS=Ar... [more]
BCAT4_ARATH3.575e-3253.70Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_HELPJ6.428e-2145.87Branched-chain-amino-acid aminotransferase OS=Heli... [more]
ILVE_HAEIN3.190e-2044.95Branched-chain-amino-acid aminotransferase OS=Haem... [more]
ILVE_HELPY4.167e-2045.87Branched-chain-amino-acid aminotransferase OS=Heli... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-387 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-82_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509879 ID=CF509879; Name=CF509879; organism=Citrus sinensis; type=EST; length=468bp
CTCAAGCTTCAAAAGCAAACTGCTTTCACTCCTTACCATGTGAACCAAAC
GGACTCTCCTTTCAAGCTTTTTTCCGTTTCATCTCATACTCTCAGCAATG
AAACGATTCAATTAGCCGACATAGATTGGGACAACCTTGGATTTGGGTTT
TGTCCTACTGATTATATGTACGTCATGAAATGTGGAAGAGATGGAAACTT
CTCTAAAGGTGAATTACAGCGTTTTGGTAACATTGAGTTGAGTCCATCCT
CTGGAGTCTTAAATTATGGCCAGGGATTATTCGAAGGCCTGAAAGCCTAC
AGGAAACAAGATGGTAACATTCTTCTCTTTCGTCCTGAGGAAAATGCAAT
GCGGATGCAGGTGGGTGCGGAGCGGATGTGCATGCCATCACCATCAGTTC
AACAGTTTGTAGAAGCTGTTAAGGCTACTGTTTTAGCAACAAACGTTGGA
TCCCTCCTCCTGGTAAAG
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