CF509880

Overview
NameCF509880
Unique NameCF509880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length583
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF509880 vs. ExPASy Swiss-Prot
Match: DRL21_ARATH (Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.074e-12
Identity = 52/150 (34.67%), Postives = 76/150 (50.67%), Query Frame = 2 
Query:   98 AFKRLVLRSCGNLVSSPEGGLPCAKLAMLAIYNCKRLEALPKGLHNLKSLQELRIGKGVALPSLEEDGLPTNLHVLLINGNMEIWKSMIERGR-GFHRFSSLRQLTIMNWDDHMVSFPPKADDKGSGTALPLPASLTYLRIEGFPNLERL 544
            A + L +R C NL + P+GGLP  KL+ + + NCK+L+ALP+ L  L SL  L I K   + ++   G P+NL  L I+    +   +  R   G     +LR L I   ++ + SFP +           LP S+  LRI  F NL+ L
Sbjct: 1216 ALESLEIRDCPNLETFPQGGLPTPKLSSMLLSNCKKLQALPEKLFGLTSLLSLFIIKCPEIETIPGGGFPSNLRTLCIS----LCDKLTPRIEWGLRDLENLRNLEIDGGNEDIESFPEEG---------LLPKSVFSLRISRFENLKTL 1352
The following BLAST results are available for this feature:
BLAST of CF509880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DRL21_ARATH1.074e-1234.67Putative disease resistance protein At3g14460 OS=A... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-388 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-82_E07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509880 ID=CF509880; Name=CF509880; organism=Citrus sinensis; type=EST; length=583bp
CAGAAATGTTGGACAACAACACATCTCTTGAAAAAATCAACATTTCTGGT
TGTGGAAATCTTCAAACTTTACCGAGTGGTTTACATAATCTTTGCCAGCC
TTCAAGAGATTAGTATTGCGGAGTTGTGGAAATCTGGTGTCCTCTCCGGA
AGGGGGATTGCCTTGTGCGAAACTCGCAATGCTGGCGATATATAATTGTA
AGAGACTAGAGGCCTTACCCAAGGGATTGCACAATCTGAAGTCTCTTCAA
GAATTAAGAATAGGAAAAGGAGTTGCGCTTCCAAGCCTTGAAGAAGATGG
CCTTCCCACCAACCTTCATGTACTGCTGATTAATGGTAATATGGAGATTT
GGAAGTCAATGATTGAGCGGGGCCGGGGATTTCACAGATTCTCCTCTCTG
CGACAACTTACAATCATGAATTGGGATGACCACATGGTGTCATTCCCACC
CAAGGCAGATGACAAAGGATCGGGGACCGCGCTTCCTCTTCCTGCCTCTC
TAACATATCTGAGGATTGAAGGTTTTCCAAATCTGGAACGCCTAACTTCT
TCAATTGTTGATCTTCAAAACCTCACTGGATTG
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