CF509883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF509883 vs. ExPASy Swiss-Prot
Match: DCOR_DATST (Ornithine decarboxylase OS=Datura stramonium PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.237e-41 Identity = 89/161 (55.28%), Postives = 111/161 (68.94%), Query Frame = 2 Query: 5 LAALGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEXXXXXXXXXXXXXXXXXXDTAARTSNNKMRVLDIGG 487 L+A+GSNFDC SR+EIE VL LG+SPDRI++ANPCKP S I +AA VGVNLTT DS +E+ KIR HPK +LL+RIK DD A+ P+ KYGA P+E+ PLL+ A+A+ L+V GVSFH+GS +TAAR +KM VLDIGG Sbjct: 105 LSAMGSNFDCASRAEIEYVLSLGISPDRIVFANPCKPESDIIFAAKVGVNLTTFDSEDEVYKIRKHHPKCELLLRIKPMDDGNARCPMGPKYGA--LPEEVEPLLRTAQAARLTVSGVSFHIGSGDADSKAYLGAIAAAKGVFETAARFGMSKMTVLDIGG 263
BLAST of CF509883 vs. ExPASy Swiss-Prot
Match: DCOR_CAPAN (Ornithine decarboxylase OS=Capsicum annuum GN=ODC PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 4.399e-39 Identity = 86/161 (53.42%), Postives = 109/161 (67.70%), Query Frame = 2 Query: 5 LAALGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEXXXXXXXXXXXXXXXXXXDTAARTSNNKMRVLDIGG 487 LAA+GSNF C SR+EIE VL LG+SP+RI++ANPCKP S I +A VGVNLTT DS +E+ KI+ HPK +LL+RIK +D A+ P+ KYGA P+EI PLL+ A+AS L+V GVSFH+GS +TAA+ +KM VLDIGG Sbjct: 109 LAAMGSNFVCASRAEIEYVLSLGISPERIVFANPCKPESDIIFAEKVGVNLTTYDSEDEVYKIKKHHPKCELLLRIKPMNDGNARCPMGPKYGA--LPEEIEPLLRIAQASRLTVSGVSFHIGSGDADSNAYLGAIAAAKQVFETAAKFGMSKMNVLDIGG 267
BLAST of CF509883 vs. ExPASy Swiss-Prot
Match: DCOR_SOLLC (Ornithine decarboxylase OS=Solanum lycopersicum GN=ODC PE=2 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 9.799e-39 Identity = 85/161 (52.80%), Postives = 107/161 (66.46%), Query Frame = 2 Query: 5 LAALGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEXXXXXXXXXXXXXXXXXXDTAARTSNNKMRVLDIGG 487 L+A+GSNFDC SR+EIE VL G+SPDRI++ANPCKP S I +A +GVNLTT DS +E+ KIR HPK +LL+RIK D A+ P+ KYGA P+EI PLL+ A+A+ L+V GVSFH+GS +TAA+ KM VLDIGG Sbjct: 105 LSAMGSNFDCASRAEIEYVLSHGISPDRIVFANPCKPESDIIFAEKIGVNLTTYDSEDEVYKIRKHHPKCELLLRIKPMTDGNARCPMGPKYGA--LPEEIEPLLRTAQAARLTVSGVSFHIGSGDADSNAYLGAIAAAKQVFETAAQLGMPKMTVLDIGG 263
BLAST of CF509883 vs. ExPASy Swiss-Prot
Match: DCOR_YEAST (Ornithine decarboxylase OS=Saccharomyces cerevisiae GN=SPE1 PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 8.315e-30 Identity = 75/162 (46.30%), Postives = 99/162 (61.11%), Query Frame = 2 Query: 5 LAALGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEXXXXXXXXXXXXXXXXXXDTAARTSN-NKMRVLDIGG 487 LA LG NFDC S+ EI+ VL + +SPDRI+YANPCK S I+YAAS V +T D+VEEL KI+ +HP+S LL+RI + DDS A+ L +KYG + + LLKA + GL++ GVSFHVGS D AA +++LD+GG Sbjct: 127 LAELGVNFDCASKVEIDRVLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRI-ATDDSTAQCRLSTKYGC--EMENVDVLLKAIKELGLNLAGVSFHVGSGASDFTSLYKAVRDARTVFDKAANEYGLPPLKILDVGG 285
BLAST of CF509883 vs. ExPASy Swiss-Prot
Match: DCOR_DICDI (Probable ornithine decarboxylase OS=Dictyostelium discoideum GN=odc PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 5.959e-28 Identity = 70/161 (43.48%), Postives = 99/161 (61.49%), Query Frame = 2 Query: 5 LAALGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEXXXXXXXXXXXXXXXXXXDTAARTSNNKMRVLDIGG 487 L ALG+N+DC SR+EIE+VL LGV P RIIYANPCK +S +K+A + V L T D++ EL+KI + P+++L++RI +PDDS + SK+G H + LL+ A+ L VVGVSFHVGS D A + N ++ ++D+GG Sbjct: 127 LDALGTNYDCASRTEIESVLNLGVDPSRIIYANPCKQISALKFARAHNVKLMTFDNLSELEKIEKFFPEAELVLRI-APDDSKSVMRFGSKFGV--HIDDCNDLLEMAKEMNLKVVGVSFHVGSGCQSGDSYADALIMVKSVFDMAKKL-NMELTLVDVGG 283
BLAST of CF509883 vs. ExPASy Swiss-Prot
Match: DCOR_SCHPO (Ornithine decarboxylase OS=Schizosaccharomyces pombe GN=spe1 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.734e-27 Identity = 64/124 (51.61%), Postives = 86/124 (69.35%), Query Frame = 2 Query: 5 LAALGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGS 376 L G+ FDC S+ E+E +L LGVSPDRI+YANPCK +++++YAAS G+NL T D+ +EL K++ HP S LL+RI S DDS + L K+GA + LL A++ L+VVGVSFHVGS Sbjct: 109 LNKFGTGFDCASKGELEQILGLGVSPDRIVYANPCKAITYVRYAASKGINLMTFDNADELYKVKQHHPNSRLLLRI-STDDSNSLCRLSLKFGAS--LDDTGKLLDIAKSLELNVVGVSFHVGS 229
BLAST of CF509883 vs. ExPASy Swiss-Prot
Match: DCOR_TRYBB (Ornithine decarboxylase OS=Trypanosoma brucei brucei PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 3.862e-27 Identity = 69/161 (42.86%), Postives = 95/161 (59.01%), Query Frame = 2 Query: 5 LAALGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEXXXXXXXXXXXXXXXXXXDTAARTSNNKMRVLDIGG 487 LAALG+ FDC S +EI+ V +GV P++IIYANPCK +SHI+YA GV++ T D V+EL+K+ HPK+ +++RI S DDS A+ L K+GA ++ +L+ A+ + V GVSFHVGS D N M +LDIGG Sbjct: 78 LAALGTGFDCASNTEIQRVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRI-STDDSLARCRLSVKFGA--KVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSRFVFDMGTELGFN-MHILDIGG 234
BLAST of CF509883 vs. ExPASy Swiss-Prot
Match: DCOR_BOVIN (Ornithine decarboxylase OS=Bos taurus GN=ODC1 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 5.045e-27 Identity = 74/161 (45.96%), Postives = 94/161 (58.39%), Query Frame = 2 Query: 5 LAALGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEXXXXXXXXXXXXXXXXXXDTAARTSNNKMRVLDIGG 487 LAA+G+ FDC S++EI+ V LGV P+RIIYANPCK VS IKYAA+ GV + T DS EL K+ HPK+ L++RI + DDS A L K+GA + LL+ A+ + V+GVSFHVGS D A N M +LDIGG Sbjct: 80 LAAIGTGFDCASKTEIQLVQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRI-ATDDSKAVCRLSVKFGATLKTSRL--LLERAKELDIDVIGVSFHVGSGCTDPETFVQAISDARCVFDMGAEVGFN-MYLLDIGG 236
BLAST of CF509883 vs. ExPASy Swiss-Prot
Match: DCOR_HUMAN (Ornithine decarboxylase OS=Homo sapiens GN=ODC1 PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 1.917e-26 Identity = 74/161 (45.96%), Postives = 93/161 (57.76%), Query Frame = 2 Query: 5 LAALGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEXXXXXXXXXXXXXXXXXXDTAARTSNNKMRVLDIGG 487 LAA G+ FDC S++EI+ V LGV P+RIIYANPCK VS IKYAA+ GV + T DS EL K+ HPK+ L++RI + DDS A L K+GA + LL+ A+ + VVGVSFHVGS D A + M +LDIGG Sbjct: 80 LAATGTGFDCASKTEIQLVQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRI-ATDDSKAVCRLSVKFGATLRTSRL--LLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARCVFDMGAEVGFS-MYLLDIGG 236
BLAST of CF509883 vs. ExPASy Swiss-Prot
Match: DCOR_CHICK (Ornithine decarboxylase (Fragment) OS=Gallus gallus GN=ODC1 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.504e-26 Identity = 74/161 (45.96%), Postives = 94/161 (58.39%), Query Frame = 2 Query: 5 LAALGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEXXXXXXXXXXXXXXXXXXDTAARTSNNKMRVLDIGG 487 LA LG+ FDC S++EI+ V +GV P+RIIYANPCK +S IK+AA+ GV + T DS EL KI HPK+ LL+RI + DDS A L K+GA + LL+ A+ L++VGVSFHVGS D A N M +LDIGG Sbjct: 70 LAVLGAGFDCASKTEIQLVQSIGVPPERIIYANPCKQLSQIKHAANSGVRMMTFDSEVELMKIARPHPKAKLLLRI-TTDDSKAVCRLSVKFGATLKTSRL--LLERAKELDLAIVGVSFHVGSGCTDPETFVQAISDARCVFDMGAELGFN-MYLLDIGG 226 The following BLAST results are available for this feature:
BLAST of CF509883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509883 ID=CF509883; Name=CF509883; organism=Citrus sinensis; type=EST; length=488bpback to top |