CF509923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF509923 vs. ExPASy Swiss-Prot
Match: PUB9_ARATH (U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.068e-33 Identity = 71/122 (58.20%), Postives = 88/122 (72.13%), Query Frame = 2 Query: 209 MAKTGIFDSDPTVMPKATELKKELQKLVRLIVDDVDYRTETIDQARDTLCAXXXXXXXXXXXXXXXH--ETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVL 568 MAKTG+FDSDPT + KA ELK+E++KL+ I D+ D +TIDQ +D L A ETVSCPEEF+CPLS ELMRDPV+LASGQT+D+ +IQ+WL +GNRTCP+TQQVL Sbjct: 1 MAKTGVFDSDPTAIAKAKELKREMKKLLIKIDDEDDLGVQTIDQLQDALSALREATMRKMAKSSSLEMLETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVL 122
BLAST of CF509923 vs. ExPASy Swiss-Prot
Match: PUB11_ARATH (U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.734e-13 Identity = 31/53 (58.49%), Postives = 43/53 (81.13%), Query Frame = 2 Query: 410 ETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVL 568 + ++ P +F CP+S ELM+DPVI+A+GQT++R YIQRW+ GN TCP+TQQ L Sbjct: 237 DKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKL 289
BLAST of CF509923 vs. ExPASy Swiss-Prot
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.039e-12 Identity = 29/54 (53.70%), Postives = 44/54 (81.48%), Query Frame = 2 Query: 407 HETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVL 568 H + PE F+CP+S ELM+DPVI+++GQT++R IQ+WL AG++TCP++Q+ L Sbjct: 243 HRSPVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETL 296
BLAST of CF509923 vs. ExPASy Swiss-Prot
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.357e-12 Identity = 27/49 (55.10%), Postives = 43/49 (87.76%), Query Frame = 2 Query: 425 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLS 571 P++F+CP+S E+MRDPVI++SGQT++R I++W++ G+ TCP+TQQ L+ Sbjct: 257 PDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALT 305
BLAST of CF509923 vs. ExPASy Swiss-Prot
Match: PUB10_ARATH (U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.357e-12 Identity = 28/53 (52.83%), Postives = 43/53 (81.13%), Query Frame = 2 Query: 410 ETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVL 568 + ++ PE+F CP+S ELM+DP I+++GQT++R +IQRW+ GN +CP+TQQ L Sbjct: 239 DNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKL 291
BLAST of CF509923 vs. ExPASy Swiss-Prot
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.772e-12 Identity = 29/49 (59.18%), Postives = 42/49 (85.71%), Query Frame = 2 Query: 425 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLS 571 PEEF+CP+S ELM DPVI++SGQT++R I++WL+ G+ TCP+TQ+ L+ Sbjct: 257 PEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLT 305
BLAST of CF509923 vs. ExPASy Swiss-Prot
Match: SL11_ORYSJ (Protein spotted leaf 11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 2.315e-12 Identity = 27/52 (51.92%), Postives = 44/52 (84.62%), Query Frame = 2 Query: 416 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLS 571 ++ P+EF+CP+S ELM+DPVI+++GQT++R I++W+ +G+ TCP TQQ +S Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMS 322
BLAST of CF509923 vs. ExPASy Swiss-Prot
Match: SL11_ORYSI (Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 2.315e-12 Identity = 27/52 (51.92%), Postives = 44/52 (84.62%), Query Frame = 2 Query: 416 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLS 571 ++ P+EF+CP+S ELM+DPVI+++GQT++R I++W+ +G+ TCP TQQ +S Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMS 322
BLAST of CF509923 vs. ExPASy Swiss-Prot
Match: PUB3_ARATH (U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 2.315e-12 Identity = 33/52 (63.46%), Postives = 40/52 (76.92%), Query Frame = 2 Query: 416 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLS 571 +S P F+CPLS ELM DPVI+ASGQTFDR I++WL G CPRT+QVL+ Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLT 287
BLAST of CF509923 vs. ExPASy Swiss-Prot
Match: PUB16_ARATH (U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.023e-12 Identity = 40/112 (35.71%), Postives = 64/112 (57.14%), Query Frame = 2 Query: 257 ATELKKELQKLVRLIVDDVDYRTET-----IDQARDTLCAXXXXXXXXXXXXXXXHETVS---CPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVL 568 + L E+Q+L I D +D R+++ I R + C H+++S P +F+CP++ ELMRDPV++A+GQT+DR I W+++G+ TCP+T QVL Sbjct: 213 SASLTDEIQRLEDEIQDQIDDRSKSAAASLIGLVRYSKCVLYGPSTPAPDFRR--HQSLSDANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVL 322 The following BLAST results are available for this feature:
BLAST of CF509923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509923 ID=CF509923; Name=CF509923; organism=Citrus sinensis; type=EST; length=573bpback to top |