CF509933

Overview
NameCF509933
Unique NameCF509933
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length573
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF509933 vs. ExPASy Swiss-Prot
Match: KAD_PRUAR (Adenylate kinase OS=Prunus armeniaca PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.179e-22
Identity = 61/110 (55.45%), Postives = 68/110 (61.82%), Query Frame = 3 
Query:    6 MWRRAAXXXXXXXXXXXXXRNHQTAYNLKIWESFTTE--IPTQVKGGKGPFICFVLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIASNSEYG**CLMLIIENCFVP 329
            MWRR                N Q A   KIWE+FT+E  IPT  KG   PF+ FVLGGPGSGKGTQCAKIV+ +G TH+SAG+LLRREIAS S YG   L  I E   VP
Sbjct:    1 MWRRVTSVSHLFSHSKSTKFN-QGASTFKIWETFTSESEIPTPSKGS--PFVTFVLGGPGSGKGTQCAKIVEAFGFTHVSAGDLLRREIASGSAYGSVILSTIREGKIVP 107

HSP 2 Score: 88.5817 bits (218), Expect = 2.390e-17
Identity = 42/63 (66.67%), Postives = 52/63 (82.54%), Query Frame = 2 
Query:  374 FSTTILNTIKEGKIVPSEVTVSLIQKEMESSDSKKFLIDGFPRSEENRAAFERIVSIPPSCLI 562
            + + IL+TI+EGKIVPS+VTV LIQKEMESSD+ KFLIDGFPRSEENR AFE+ +   P  ++
Sbjct:   92 YGSVILSTIREGKIVPSQVTVELIQKEMESSDNYKFLIDGFPRSEENRKAFEQTIGAEPDVVL 154
[Close]
BLAST of CF509933 vs. ExPASy Swiss-Prot
Match: KCY_RAT (UMP-CMP kinase OS=Rattus norvegicus GN=Cmpk1 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.504e-21
Identity = 37/63 (58.73%), Postives = 45/63 (71.43%), Query Frame = 3 
Query:  147 PFICFVLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIAS-NSEYG**CLMLIIENCFVPL 332
            P + FVLGGPG+GKGTQCA+IV+ YG THLSAGELLR E  + +S+YG      I E   VP+
Sbjct:    3 PLVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPV 65

HSP 2 Score: 52.7582 bits (125), Expect = 1.504e-21
Identity = 24/44 (54.55%), Postives = 35/44 (79.55%), Query Frame = 2 
Query:  398 IKEGKIVPSEVTVSLIQKEME-----SSDSKKFLIDGFPRSEEN 514
            IKEGKIVP E+T+SL+++EM+     ++   KFLIDGFPR+++N
Sbjct:   57 IKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 100
[Close]
BLAST of CF509933 vs. ExPASy Swiss-Prot
Match: KCY_MOUSE (UMP-CMP kinase OS=Mus musculus GN=Cmpk1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.504e-21
Identity = 37/63 (58.73%), Postives = 45/63 (71.43%), Query Frame = 3 
Query:  147 PFICFVLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIAS-NSEYG**CLMLIIENCFVPL 332
            P + FVLGGPG+GKGTQCA+IV+ YG THLSAGELLR E  + +S+YG      I E   VP+
Sbjct:    3 PLVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPV 65

HSP 2 Score: 52.7582 bits (125), Expect = 1.504e-21
Identity = 24/44 (54.55%), Postives = 35/44 (79.55%), Query Frame = 2 
Query:  398 IKEGKIVPSEVTVSLIQKEME-----SSDSKKFLIDGFPRSEEN 514
            IKEGKIVP E+T+SL+++EM+     ++   KFLIDGFPR+++N
Sbjct:   57 IKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 100
[Close]
BLAST of CF509933 vs. ExPASy Swiss-Prot
Match: KCY_HUMAN (UMP-CMP kinase OS=Homo sapiens GN=CMPK1 PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.504e-21
Identity = 37/63 (58.73%), Postives = 45/63 (71.43%), Query Frame = 3 
Query:  147 PFICFVLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIAS-NSEYG**CLMLIIENCFVPL 332
            P + FVLGGPG+GKGTQCA+IV+ YG THLSAGELLR E  + +S+YG      I E   VP+
Sbjct:    3 PLVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPV 65

HSP 2 Score: 52.7582 bits (125), Expect = 1.504e-21
Identity = 24/44 (54.55%), Postives = 35/44 (79.55%), Query Frame = 2 
Query:  398 IKEGKIVPSEVTVSLIQKEME-----SSDSKKFLIDGFPRSEEN 514
            IKEGKIVP E+T+SL+++EM+     ++   KFLIDGFPR+++N
Sbjct:   57 IKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 100
[Close]
BLAST of CF509933 vs. ExPASy Swiss-Prot
Match: KCY_XENTR (UMP-CMP kinase OS=Xenopus tropicalis GN=cmpk1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.504e-21
Identity = 32/48 (66.67%), Postives = 39/48 (81.25%), Query Frame = 3 
Query:  147 PFICFVLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIAS-NSEYG 287
            PF+ FVLGGPG+GKGTQC +IV+ YG THLSAG+LLR E    +S+YG
Sbjct:    3 PFVVFVLGGPGAGKGTQCERIVQKYGYTHLSAGDLLRDERKKPDSQYG 50

HSP 2 Score: 54.299 bits (129), Expect = 1.504e-21
Identity = 26/61 (42.62%), Postives = 42/61 (68.85%), Query Frame = 2 
Query:  374 FSTTILNTIKEGKIVPSEVTVSLIQKEMESS-----DSKKFLIDGFPRSEENRAAFERIVS 541
            +   I + I++G+IVP E+T+SL+Q+ ME +     +  KFLIDGFPR+E+N   +ER ++
Sbjct:   49 YGELIESYIRDGRIVPVEITISLLQRAMEQTMALDGNKHKFLIDGFPRNEDNLQGWERTMN 109
[Close]
BLAST of CF509933 vs. ExPASy Swiss-Prot
Match: KCY_DANRE (UMP-CMP kinase OS=Danio rerio GN=cmpk1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.546e-21
Identity = 32/48 (66.67%), Postives = 41/48 (85.42%), Query Frame = 3 
Query:  147 PFICFVLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIA-SNSEYG 287
            P + FVLGGPG+GKGTQCA+IV+NY  THLSAG+LLR E + ++SE+G
Sbjct:    3 PQVVFVLGGPGAGKGTQCARIVENYSYTHLSAGDLLREERSRTDSEFG 50

HSP 2 Score: 53.5286 bits (127), Expect = 2.546e-21
Identity = 28/57 (49.12%), Postives = 41/57 (71.93%), Query Frame = 2 
Query:  359 RLELDFSTTILNTIKEGKIVPSEVTVSLIQKEME---SSDSKK--FLIDGFPRSEEN 514
            R + +F   I + IKEGKIVP ++T++L++K ME    +D KK  FLIDGFPR+++N
Sbjct:   44 RTDSEFGQLIDSYIKEGKIVPVQITINLLRKAMEETMKADEKKFRFLIDGFPRNQDN 100
[Close]
BLAST of CF509933 vs. ExPASy Swiss-Prot
Match: KCY_XENLA (UMP-CMP kinase OS=Xenopus laevis GN=cmpk1 PE=2 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 3.313e-21
Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 3 
Query:  147 PFICFVLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIAS-NSEYG 287
            P + FVLGGPG+GKGTQC +IV+ YG THLSAG+LLR E    +S+YG
Sbjct:    3 PLVVFVLGGPGAGKGTQCERIVQKYGYTHLSAGDLLRDERKKPDSQYG 50

HSP 2 Score: 55.4546 bits (132), Expect = 3.313e-21
Identity = 27/61 (44.26%), Postives = 42/61 (68.85%), Query Frame = 2 
Query:  374 FSTTILNTIKEGKIVPSEVTVSLIQKEME-----SSDSKKFLIDGFPRSEENRAAFERIVS 541
            +   I + I++GKIVP E+T+SL+Q+ ME      ++  KFLIDGFPR+E+N   +ER ++
Sbjct:   49 YGELIESYIRDGKIVPVEITISLLQRAMERTMAFDANKHKFLIDGFPRNEDNLQGWERTMN 109
[Close]
BLAST of CF509933 vs. ExPASy Swiss-Prot
Match: KCY_DICDI (Cytidylate kinase OS=Dictyostelium discoideum GN=pyrK PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 5.608e-21
Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 3 
Query:  147 PFICFVLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIASNSEYG 287
            P + FVLGGPGSGKGTQCA IV+++G  HLSAG+LLR+E  S S+ G
Sbjct:    7 PNVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQSGSKDG 53

HSP 2 Score: 53.9138 bits (128), Expect = 5.608e-21
Identity = 24/48 (50.00%), Postives = 35/48 (72.92%), Query Frame = 2 
Query:  386 ILNTIKEGKIVPSEVTVSLIQKEMESSDSKKFLIDGFPRSEENRAAFE 529
            I   IK G+IVPS VTV L++  ++++  K FL+DGFPR+EEN  ++E
Sbjct:   56 IATMIKNGEIVPSIVTVKLLKNAIDANQGKNFLVDGFPRNEENNNSWE 103
[Close]
BLAST of CF509933 vs. ExPASy Swiss-Prot
Match: KCY_CHICK (UMP-CMP kinase OS=Gallus gallus GN=CMPK1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.291e-21
Identity = 32/48 (66.67%), Postives = 38/48 (79.17%), Query Frame = 3 
Query:  147 PFICFVLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRRE-IASNSEYG 287
            P + FVLGGPG+GKGTQCA+IV+ YG THLSAG+LLR E     S+YG
Sbjct:    3 PVVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGDLLRDERKRPGSQYG 50

HSP 2 Score: 53.5286 bits (127), Expect = 7.291e-21
Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 2 
Query:  374 FSTTILNTIKEGKIVPSEVTVSLIQKEME-----SSDSKKFLIDGFPRSEEN 514
            +   I N IKEG+IVP E+T+SL+++ M+     +S   KFLIDGFPR+E+N
Sbjct:   49 YGELIENYIKEGEIVPVEITISLLKRAMDQTMAANSQKNKFLIDGFPRNEDN 100
[Close]
BLAST of CF509933 vs. ExPASy Swiss-Prot
Match: KCY_PIG (UMP-CMP kinase OS=Sus scrofa GN=CMPK1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.485e-21
Identity = 33/48 (68.75%), Postives = 40/48 (83.33%), Query Frame = 3 
Query:  147 PFICFVLGGPGSGKGTQCAKIVKNYGLTHLSAGELLRREIAS-NSEYG 287
            P + FVLGGPG+GKGTQCA+IV+ YG THLSAGELLR E  + +S+YG
Sbjct:    3 PKVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYG 50

HSP 2 Score: 51.6026 bits (122), Expect = 9.485e-21
Identity = 23/44 (52.27%), Postives = 35/44 (79.55%), Query Frame = 2 
Query:  398 IKEGKIVPSEVTVSLIQKEME-----SSDSKKFLIDGFPRSEEN 514
            IK+GKIVP E+T+SL+++EM+     ++   KFLIDGFPR+++N
Sbjct:   57 IKDGKIVPVEITISLLRREMDQTMAANAQKNKFLIDGFPRNQDN 100
The following BLAST results are available for this feature:
BLAST of CF509933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
KAD_PRUAR7.179e-2255.45Adenylate kinase OS=Prunus armeniaca PE=2 SV=1[more]
KCY_RAT1.504e-2158.73UMP-CMP kinase OS=Rattus norvegicus GN=Cmpk1 PE=1 ... [more]
KCY_MOUSE1.504e-2158.73UMP-CMP kinase OS=Mus musculus GN=Cmpk1 PE=1 SV=1[more]
KCY_HUMAN1.504e-2158.73UMP-CMP kinase OS=Homo sapiens GN=CMPK1 PE=1 SV=3[more]
KCY_XENTR1.504e-2166.67UMP-CMP kinase OS=Xenopus tropicalis GN=cmpk1 PE=2... [more]
KCY_DANRE2.546e-2166.67UMP-CMP kinase OS=Danio rerio GN=cmpk1 PE=2 SV=2[more]
KCY_XENLA3.313e-2164.58UMP-CMP kinase OS=Xenopus laevis GN=cmpk1 PE=2 SV=... [more]
KCY_DICDI5.608e-2165.96Cytidylate kinase OS=Dictyostelium discoideum GN=p... [more]
KCY_CHICK7.291e-2166.67UMP-CMP kinase OS=Gallus gallus GN=CMPK1 PE=2 SV=1[more]
KCY_PIG9.485e-2168.75UMP-CMP kinase OS=Sus scrofa GN=CMPK1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-445 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_B08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509933 ID=CF509933; Name=CF509933; organism=Citrus sinensis; type=EST; length=573bp
TTACGATGTGGAGGCGCGCGGCTTCGCTTTCTCCTTTCATCTCTTCCTCA
GGATCATTGATTCGCAATCATCAGACAGCTTACAACTTGAAGATTTGGGA
ATCATTTACCACGGAAATACCCACCCAGGTAAAAGGAGGCAAGGGTCCAT
TCATATGTTTCGTCTTAGGTGGCCCTGGTAGTGGAAAAGGTACGCAATGT
GCAAAAATTGTGAAGAATTACGGATTGACACATCTAAGTGCGGGAGAGTT
ATTAAGGAGAGAAATAGCTTCTAACAGTGAATATGGGTAATAATGTCTCA
TGCTCATCATTGAAAATTGTTTTGTTCCACTTAACTTCAAAACTGTTGCA
TCCCTTGACGATTGGAACTGGATTTCAGCACCACAATTCTCAACACAATC
AAAGAAGGAAAAATTGTCCCTTCAGAAGTAACAGTCAGCCTGATCCAAAA
GGAGATGGAATCAAGTGATAGCAAAAAATTTCTAATTGATGGTTTTCCCC
GAAGTGAGGAGAATCGTGCAGCATTTGAACGGATTGTGAGTATTCCTCCT
TCTTGCCTCATTTGTGATATTGG
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