CF509934

Overview
NameCF509934
Unique NameCF509934
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6260 contig Csv1_Contig6260:52..602. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF509934 vs. ExPASy Swiss-Prot
Match: CP51_SORBI (Obtusifoliol 14-alpha demethylase OS=Sorghum bicolor GN=CYP51 PE=1 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 1.489e-66
Identity = 120/168 (71.43%), Postives = 142/168 (84.52%), Query Frame = 3
Query:   48 LIMATIVVAKLISSLVMPRSSKRLPPIVKGYPLIGGLVKFLKGPIVMIREEYSKLGSVFTVNLCNRNITFLIGPEVSAHFFKAPESDLSQQEVYQFNVPTFGPGVVFDVDYSIRQEQFRFFTEALRVTKLKGYVDQMVVEAEDYFSKWGDSGEVDLKFELEHLIILTA 551
            L++AT++  KL+ S       KRLPP + G P++GGLVKF++GPI MIRE+Y+ LGSVFTV +  R ITFLIGPEVSAHFFK  E+++SQQEVY+FNVPTFGPGVVFDVDYS+RQEQFRFFTEALR  KL+ YVDQMV EAE+YFSKWG+SG VDLK+ELEHLIILTA
Sbjct:   18 LVVATVIFLKLLLSFRSGGGKKRLPPTIPGAPVVGGLVKFMRGPIPMIREQYAALGSVFTVPIITRRITFLIGPEVSAHFFKGNEAEMSQQEVYRFNVPTFGPGVVFDVDYSVRQEQFRFFTEALRANKLRSYVDQMVAEAEEYFSKWGESGTVDLKYELEHLIILTA 185          
BLAST of CF509934 vs. ExPASy Swiss-Prot
Match: CP51_WHEAT (Obtusifoliol 14-alpha demethylase (Fragment) OS=Triticum aestivum GN=CYP51 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 7.159e-61
Identity = 109/146 (74.66%), Postives = 128/146 (87.67%), Query Frame = 3
Query:  114 RLPPIVKGYPLIGGLVKFLKGPIVMIREEYSKLGSVFTVNLCNRNITFLIGPEVSAHFFKAPESDLSQQEVYQFNVPTFGPGVVFDVDYSIRQEQFRFFTEALRVTKLKGYVDQMVVEAEDYFSKWGDSGEVDLKFELEHLIILTA 551
            R PP + G P++GGL++FL+GPI +IR EY++LG VFTV +  R ITFLIGP+VSAHFFK+ ESD+SQQEVY+FNVPTFGPGVVFDVDY +RQEQFRFFTEALR  KL+ YVDQMV EAE+YFSKWG+SG VDLK+ELEHLIILTA
Sbjct:    1 RPPPTIPGAPVVGGLLRFLRGPIPLIRAEYARLGPVFTVPILTRRITFLIGPDVSAHFFKSNESDMSQQEVYRFNVPTFGPGVVFDVDYQVRQEQFRFFTEALRANKLRSYVDQMVAEAEEYFSKWGESGTVDLKYELEHLIILTA 146          
BLAST of CF509934 vs. ExPASy Swiss-Prot
Match: CP51_DICDI (Probable lanosterol 14-alpha demethylase OS=Dictyostelium discoideum GN=cyp51 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.094e-32
Identity = 70/167 (41.92%), Postives = 103/167 (61.68%), Query Frame = 3
Query:   54 MATIVVAKLISSLVMPRSSKRLPPIVKGYPLIGGLVKFLKGPIVMIREEYSKLGSVFTVNLCNRNITFLIGPEVSAHFFKAPESDLSQQEVYQFNVPTFGPGVVFDVDYSIRQEQFRFFTEALRVTKLKGYVDQMVVEAEDYF-SKWGDSGEVDLKFELEHLIILTA 551
            +A +V+A L+      +S   +PPIV+  P IG   +F K P+ ++R  Y +LG +FT++L    +TF++GPE  A FF+  + +LS +E Y+F  P FG GVV+D +  I  EQ RF    L +++LK  V  +  E E YF +KWGDSGE+DL +E+  L ILTA
Sbjct:    5 IAVLVIAILVI-FAFKKSPSNIPPIVETIPFIGCFYQFAKNPLQLVRNSYDRLGEIFTLHLMGFKMTFVLGPEAQALFFRGTDEELSPKEAYRFVTPVFGKGVVYDSETEIMYEQLRFVKNGLVLSQLKKAVGIIQEETEKYFETKWGDSGEIDLLYEMNKLTILTA 170          
BLAST of CF509934 vs. ExPASy Swiss-Prot
Match: CP51A_MOUSE (Lanosterol 14-alpha demethylase OS=Mus musculus GN=Cyp51a1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.320e-22
Identity = 57/174 (32.76%), Postives = 90/174 (51.72%), Query Frame = 3
Query:   33 YNVGLLIMATIVVAKLISSLVMPRSSKRLPPIVKGYPLIGGLVKFLKGPIVMIREEYSKLGSVFTVNLCNRNITFLIGPEVSAHFFKAPESDLSQQEVY-QFNVPTFGPGVVFDVDYSIRQEQFRFFTEALRVTKLKGYVDQMVVEAEDYFSKWGDSGEVDLKFELEHLIILTA 551
            + + L+ +  + V  ++    +P  +K  P I    P +G  + F K PI  +   Y K G VF+  +  +  T+L+G + +A  F +   DL+ +EVY +   P FG GV +DV  +I  EQ +     L +   K YV  +  EA++YF  WG+SGE ++   L  LIILTA
Sbjct:   36 FTLSLVYLFRLAVGHMVQ---LPAGAKSPPHIYSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEEVYGRLTTPVFGKGVAYDVPNAIFLEQKKIIKSGLNIAHFKQYVPIIEKEAKEYFQSWGESGERNVFEALSELIILTA 206          
BLAST of CF509934 vs. ExPASy Swiss-Prot
Match: CP51A_BOVIN (Lanosterol 14-alpha demethylase OS=Bos taurus GN=CYP51A1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.320e-22
Identity = 58/174 (33.33%), Postives = 90/174 (51.72%), Query Frame = 3
Query:   33 YNVGLLIMATIVVAKLISSLVMPRSSKRLPPIVKGYPLIGGLVKFLKGPIVMIREEYSKLGSVFTVNLCNRNITFLIGPEVSAHFFKAPESDLSQQEVY-QFNVPTFGPGVVFDVDYSIRQEQFRFFTEALRVTKLKGYVDQMVVEAEDYFSKWGDSGEVDLKFELEHLIILTA 551
            + + L+ +  + V  L   L  P  +K  P IV   P +G  + F K PI  + + Y K G VF+  +  +  T+L+G E +A  F +   DL+ +EVY +   P FG GV +DV  ++  EQ +     L +   + +V  +  E ++YF  WG+SGE +L   L  LIILTA
Sbjct:   34 FTLSLVYLFRLAVGHLAPPL--PTGAKSPPYIVSPIPFLGHAIAFGKSPIEFLEDAYEKYGPVFSFTMVGKTFTYLLGSEAAALLFNSKNEDLNAEEVYSRLTTPVFGKGVAYDVPNTVFLEQKKMLKSGLNIAHFRQHVSIIEKETKEYFKSWGESGEKNLFEALSELIILTA 205          
BLAST of CF509934 vs. ExPASy Swiss-Prot
Match: CP51A_RAT (Lanosterol 14-alpha demethylase OS=Rattus norvegicus GN=Cyp51a1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.724e-22
Identity = 56/174 (32.18%), Postives = 90/174 (51.72%), Query Frame = 3
Query:   33 YNVGLLIMATIVVAKLISSLVMPRSSKRLPPIVKGYPLIGGLVKFLKGPIVMIREEYSKLGSVFTVNLCNRNITFLIGPEVSAHFFKAPESDLSQQEVY-QFNVPTFGPGVVFDVDYSIRQEQFRFFTEALRVTKLKGYVDQMVVEAEDYFSKWGDSGEVDLKFELEHLIILTA 551
            + + L+ +  + V  ++    +P  +K  P I    P +G  + F K PI  +   Y K G VF+  +  +  T+L+G + +A  F +   DL+ +EVY +   P FG GV +DV  ++  EQ +     L +   K YV  +  EA++YF  WG+SGE ++   L  LIILTA
Sbjct:   36 FTLSLVYLFRLAVGHMVQ---LPAGAKSPPYIYSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEEVYGRLTTPVFGKGVAYDVPNAVFLEQKKILKSGLNIAHFKQYVSIIEKEAKEYFKSWGESGERNVFEALSELIILTA 206          
BLAST of CF509934 vs. ExPASy Swiss-Prot
Match: CP51A_PONAB (Lanosterol 14-alpha demethylase OS=Pongo abelii GN=CYP51A1 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 3.251e-21
Identity = 54/174 (31.03%), Postives = 88/174 (50.57%), Query Frame = 3
Query:   33 YNVGLLIMATIVVAKLISSLVMPRSSKRLPPIVKGYPLIGGLVKFLKGPIVMIREEYSKLGSVFTVNLCNRNITFLIGPEVSAHFFKAPESDLSQQEVY-QFNVPTFGPGVVFDVDYSIRQEQFRFFTEALRVTKLKGYVDQMVVEAEDYFSKWGDSGEVDLKFELEHLIILTA 551
            + + L+ +  + V  L+    +P  +K  P I    P +G  + F K PI  +   Y K G VF+  +  +  T+L+G + +A  F +   DL+ ++VY +   P FG GV +DV   +  EQ +     L +   K +V  +  E ++YF  WG+SGE ++   L  LIILTA
Sbjct:   36 FTLSLVYLFRLAVGHLVQ---LPAGAKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFESWGESGEKNVFEALSELIILTA 206          
BLAST of CF509934 vs. ExPASy Swiss-Prot
Match: CP51A_MACFA (Lanosterol 14-alpha demethylase OS=Macaca fascicularis GN=CYP51A1 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.235e-20
Identity = 52/174 (29.89%), Postives = 87/174 (50.00%), Query Frame = 3
Query:   33 YNVGLLIMATIVVAKLISSLVMPRSSKRLPPIVKGYPLIGGLVKFLKGPIVMIREEYSKLGSVFTVNLCNRNITFLIGPEVSAHFFKAPESDLSQQEVY-QFNVPTFGPGVVFDVDYSIRQEQFRFFTEALRVTKLKGYVDQMVVEAEDYFSKWGDSGEVDLKFELEHLIILTA 551
            + + L+ +  +    L+    +P  +K  P I    P +G  + F K P+  +   Y K G VF+  +  +  T+L+G + +A  F +   DL+ ++VY +   P FG GV +DV   +  EQ +     L +   K +V  +  E ++YF  WG+SGE ++   L  LIILTA
Sbjct:   36 FTLSLVYLFRLAAGHLVQ---LPAGAKSPPYIFSPIPFLGHAIAFGKSPVEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFQSWGESGEKNVFEALSELIILTA 206          
BLAST of CF509934 vs. ExPASy Swiss-Prot
Match: CP51A_PIG (Lanosterol 14-alpha demethylase OS=Sus scrofa GN=CYP51A1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.614e-20
Identity = 51/153 (33.33%), Postives = 79/153 (51.63%), Query Frame = 3
Query:   96 MPRSSKRLPPIVKGYPLIGGLVKFLKGPIVMIREEYSKLGSVFTVNLCNRNITFLIGPEVSAHFFKAPESDLSQQEVY-QFNVPTFGPGVVFDVDYSIRQEQFRFFTEALRVTKLKGYVDQMVVEAEDYFSKWGDSGEVDLKFELEHLIILTA 551
            +P  +K  P I    P +G  + F K PI  +   Y K G VF+  +  +  T+L+G + +A  F +   DL+ ++VY +   P FG GV +DV   +  EQ +     L +   + +V  +  E ++YF  WG+SGE +L   L  LIILTA
Sbjct:   54 LPAGAKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFRQHVSIIEKETKEYFQSWGESGERNLFEALSELIILTA 206          
BLAST of CF509934 vs. ExPASy Swiss-Prot
Match: CP51A_HUMAN (Lanosterol 14-alpha demethylase OS=Homo sapiens GN=CYP51A1 PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 1.614e-20
Identity = 53/174 (30.46%), Postives = 86/174 (49.43%), Query Frame = 3
Query:   33 YNVGLLIMATIVVAKLISSLVMPRSSKRLPPIVKGYPLIGGLVKFLKGPIVMIREEYSKLGSVFTVNLCNRNITFLIGPEVSAHFFKAPESDLSQQEVY-QFNVPTFGPGVVFDVDYSIRQEQFRFFTEALRVTKLKGYVDQMVVEAEDYFSKWGDSGEVDLKFELEHLIILTA 551
            + + L+ +  +    L+    +P   K  P I    P +G  + F K PI  +   Y K G VF+  +  +  T+L+G + +A  F +   DL+ ++VY +   P FG GV +DV   +  EQ +     L +   K +V  +  E ++YF  WG+SGE ++   L  LIILTA
Sbjct:   36 FTLSLVYLIRLAAGHLVQ---LPAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFESWGESGEKNVFEALSELIILTA 206          
The following BLAST results are available for this feature:
BLAST of CF509934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
CP51_SORBI1.489e-6671.43Obtusifoliol 14-alpha demethylase OS=Sorghum bicol... [more]
CP51_WHEAT7.159e-6174.66Obtusifoliol 14-alpha demethylase (Fragment) OS=Tr... [more]
CP51_DICDI4.094e-3241.92Probable lanosterol 14-alpha demethylase OS=Dictyo... [more]
CP51A_MOUSE1.320e-2232.76Lanosterol 14-alpha demethylase OS=Mus musculus GN... [more]
CP51A_BOVIN1.320e-2233.33Lanosterol 14-alpha demethylase OS=Bos taurus GN=C... [more]
CP51A_RAT1.724e-2232.18Lanosterol 14-alpha demethylase OS=Rattus norvegic... [more]
CP51A_PONAB3.251e-2131.03Lanosterol 14-alpha demethylase OS=Pongo abelii GN... [more]
CP51A_MACFA1.235e-2029.89Lanosterol 14-alpha demethylase OS=Macaca fascicul... [more]
CP51A_PIG1.614e-2033.33Lanosterol 14-alpha demethylase OS=Sus scrofa GN=C... [more]
CP51A_HUMAN1.614e-2030.46Lanosterol 14-alpha demethylase OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-446 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509934 ID=CF509934; Name=CF509934; organism=Citrus sinensis; type=EST; length=551bp
ATCAGTTGAATATGGATGAAACCAACAAATTTTACAATGTGGGTTTGCTC
ATTATGGCCACAATTGTGGTGGCCAAGCTTATTTCTTCCCTTGTAATGCC
TAGATCTAGTAAGCGTTTGCCTCCAATTGTTAAGGGTTACCCTCTGATTG
GTGGCCTTGTCAAGTTCTTGAAAGGACCCATTGTGATGATCCGTGAGGAG
TATTCAAAACTCGGGAGTGTCTTCACTGTCAACTTGTGTAATCGAAATAT
TACTTTCTTGATTGGTCCTGAGGTGTCAGCACACTTCTTTAAGGCCCCTG
AGTCTGACTTGAGTCAGCAGGAAGTGTATCAGTTCAATGTGCCCACTTTT
GGTCCTGGAGTCGTGTTTGATGTCGATTACTCGATTAGGCAGGAGCAGTT
CCGGTTCTTCACTGAGGCGCTTCGTGTGACCAAGTTGAAGGGATATGTGG
ATCAGATGGTTGTGGAAGCCGAGGATTACTTCTCAAAATGGGGAGACAGT
GGCGAGGTGGATCTGAAGTTTGAGCTGGAACATCTGATCATTTTGACTGC
C
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