CF509938
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509938 vs. ExPASy Swiss-Prot
Match: SYT_SYNS9 (Threonyl-tRNA synthetase OS=Synechococcus sp. (strain CC9902) GN=thrS PE=3 SV=1) HSP 1 Score: 321.627 bits (823), Expect = 2.423e-87 Identity = 150/231 (64.94%), Postives = 186/231 (80.52%), Query Frame = 3 Query: 3 LHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNLSTKPEKAVGGNDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKE 692 +HGL RVRGFTQDDAH+FCL DQI DEI +LDLTE IL F FN YE+NLST+PEK++G +WE AT L +AL+ KGW+++IDEGGGAFYGPKIDLKIEDA+GR WQCSTIQ+DFNLP+RF + YV ++ K++PIMIHRA+ GSLERFFG++ E+YAGDFP WL+P Q R+LPVTD Y +V+ +LKT GIRA I G+RL K+IR E+ KIP++AV+GAKE Sbjct: 338 MHGLMRVRGFTQDDAHVFCLPDQISDEILRILDLTERILSTFDFNHYEINLSTRPEKSIGSEAVWELATKGLTEALERKGWNFKIDEGGGAFYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFGLDYVAADGSKQQPIMIHRAIFGSLERFFGIMTENYAGDFPFWLAPEQIRLLPVTDDVQPYAEQVLNQLKTAGIRATIDQSGDRLGKIIRTGEQMKIPVLAVIGAKE 568
BLAST of CF509938 vs. ExPASy Swiss-Prot
Match: SYT_SYNS3 (Threonyl-tRNA synthetase OS=Synechococcus sp. (strain CC9311) GN=thrS PE=3 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 4.569e-86 Identity = 151/231 (65.37%), Postives = 184/231 (79.65%), Query Frame = 3 Query: 3 LHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNLSTKPEKAVGGNDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKE 692 +HGL RVRGFTQDDAH+FCL +QI DEI +L+LTE IL F F+ YE+NLSTKP+KA+G + +WE AT L +AL KGW Y+IDEGGGAFYGPKIDLKIEDA+GR WQCSTIQ+DFNLP+RF++ Y+ ++ K+RPIMIHRA+ GSLERFFG++ E+YAGDFP WL+P Q R+LPVTD L Y E +LK GIRA I G+RL KLIR EK KIP++AV+GAKE Sbjct: 338 MHGLMRVRGFTQDDAHVFCLPEQISDEILRILNLTERILSTFDFSNYEINLSTKPDKAIGDDAVWELATKGLIEALKRKGWAYKIDEGGGAFYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFELDYIAADGSKQRPIMIHRAIFGSLERFFGIMTENYAGDFPFWLAPEQIRLLPVTDEVLGYAEEFQNQLKAAGIRASIDRSGDRLGKLIRIGEKMKIPVLAVIGAKE 568
BLAST of CF509938 vs. ExPASy Swiss-Prot
Match: SYT_SYNPW (Threonyl-tRNA synthetase OS=Synechococcus sp. (strain WH7803) GN=thrS PE=3 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 5.052e-85 Identity = 146/231 (63.20%), Postives = 184/231 (79.65%), Query Frame = 3 Query: 3 LHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNLSTKPEKAVGGNDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKE 692 +HGL RVRGFTQDDAH+FCL +QI DEI +LDLTE IL F FN YE+NLST+PEK++G + +W+ AT L +AL+ KGW Y+IDEGGGAFYGPKIDLKIEDA+GR WQCSTIQ+DFNLP+RF + Y+ ++ K+RPIMIHRA+ GSLERFFG++ E+YAGD+PLWL+P Q R+LPVTD Y ++ +L G+RA I G+RL KLIR E+ KIP++AV+GAKE Sbjct: 338 MHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTERILSTFDFNTYEINLSTRPEKSIGDDAVWDLATKGLIEALERKGWAYKIDEGGGAFYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFKLDYIAADGSKQRPIMIHRAIFGSLERFFGIMTENYAGDYPLWLAPEQVRLLPVTDEVQPYAESLLDQLTQAGVRATIDRSGDRLGKLIRTGEQMKIPVLAVIGAKE 568
BLAST of CF509938 vs. ExPASy Swiss-Prot
Match: SYT_SYNPX (Threonyl-tRNA synthetase OS=Synechococcus sp. (strain WH8102) GN=thrS PE=3 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 8.617e-85 Identity = 146/231 (63.20%), Postives = 183/231 (79.22%), Query Frame = 3 Query: 3 LHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNLSTKPEKAVGGNDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKE 692 +HGL RVRGFTQDDAH+FCL +QI DEI +LDLTE IL F FN YE+NLST+PEK++G + +W+ AT L +AL+ KGW Y+IDEGGGAFYGPKIDLKIEDA+GR WQCSTIQ+DFNLP+RF + YV ++ K+RPIMIHRA+ GSLERFFG++ E+YAGD+P WL+P Q R+LPVTD Y ++ +L G+RA I G+RL KLIR E+ KIP++AV+GAKE Sbjct: 338 MHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTERILSTFDFNTYEINLSTRPEKSIGDDAVWDLATKGLIEALERKGWKYKIDEGGGAFYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFKLDYVAADGSKQRPIMIHRAIFGSLERFFGIMTENYAGDYPFWLAPEQVRLLPVTDEVQPYAESLLDQLTQAGVRATIDRSGDRLGKLIRTGEQMKIPVLAVIGAKE 568
BLAST of CF509938 vs. ExPASy Swiss-Prot
Match: SYT_SYNSC (Threonyl-tRNA synthetase OS=Synechococcus sp. (strain CC9605) GN=thrS PE=3 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 1.920e-84 Identity = 143/231 (61.90%), Postives = 185/231 (80.09%), Query Frame = 3 Query: 3 LHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNLSTKPEKAVGGNDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNAEKQKIPLMAVVGAKE 692 +HGL RVRGFTQDDAH+FCL +QI DEI +LDLTE IL F F+ YE+NLST+PEK++G + +W+ AT L +AL+ KGW Y+IDEGGGAFYGPKIDLKIEDA+GR WQCSTIQ+DFNLP+RF++ Y+ ++ K+RPIMIHRA+ GSLERFFG++ E+YAGD+P WL+P Q R+LPVTD Y +++ +L G+RA + G+RL KLIR E+ KIP++AV+GAKE Sbjct: 338 MHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTERILSAFDFSNYEINLSTRPEKSIGEDAVWDLATKGLIEALERKGWAYKIDEGGGAFYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFELDYIAADGSKQRPIMIHRAIFGSLERFFGIMTENYAGDYPFWLAPEQVRLLPVTDEVQPYAEQLLDQLTKAGVRATVDRSGDRLGKLIRTGEQMKIPVLAVIGAKE 568
BLAST of CF509938 vs. ExPASy Swiss-Prot
Match: SYT_THISH (Threonyl-tRNA synthetase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=thrS PE=3 SV=1) HSP 1 Score: 304.294 bits (778), Expect = 4.003e-82 Identity = 142/231 (61.47%), Postives = 184/231 (79.65%), Query Frame = 3 Query: 3 LHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNLSTKPEKAVGGNDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKE 692 LHGL RVRGFTQDDAHIFC EDQI+ EI +LDLT E+L FGF+ ++VNLST+P+KAVG + IWE AT+AL+ AL+ KG DY +DEGGGAFYGPKID+KI DA+GR+WQCST+Q+DFNLP+RF++ YV ++ ++RPIMIHRA+LGS+ERFFGVLIEHYAG FPLWL+P+Q +VL +TD Q +Y EV +L+ GIRA+ E++ IR Q++P + V+G +E Sbjct: 371 LHGLMRVRGFTQDDAHIFCREDQIEAEILRILDLTLEVLQAFGFDDFDVNLSTRPDKAVGSDQIWEHATAALKAALEKKGLDYSVDEGGGAFYGPKIDIKIRDAIGREWQCSTVQLDFNLPERFEMEYVAEDNSRRRPIMIHRALLGSVERFFGVLIEHYAGSFPLWLAPVQVQVLTITDRQDDYAREVADRLRNRGIRADADLRNEKIGFKIREHTLQRVPYLLVLGDRE 601
BLAST of CF509938 vs. ExPASy Swiss-Prot
Match: SYT_SULSY (Threonyl-tRNA synthetase OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=thrS PE=3 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 4.893e-80 Identity = 141/231 (61.04%), Postives = 178/231 (77.06%), Query Frame = 3 Query: 3 LHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNLSTKPEKAVGGNDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKE 692 LHGL RVRGFTQDDAHI C EDQ++DEIR VL+L L +GF+++EV LSTKPEK VG + +WE A ++LR A++ G DY+ID+GGGAFYGPKID+KI+DA+GR WQCSTIQ DFNLP+RFD+ Y+ +++K RP MIHRA+ GS+ERF GVL+EHYAG P+WLSP+Q +++P+ D LEY V +KL N IR E+ ER+ K IR+AE QKIP M VVG KE Sbjct: 375 LHGLMRVRGFTQDDAHIICREDQVEDEIREVLNLALNTLKSYGFDEFEVYLSTKPEKYVGDDKMWEVAENSLRKAIESTGLDYKIDDGGGAFYGPKIDVKIKDAIGRLWQCSTIQFDFNLPERFDMYYIGEDNQKHRPYMIHRAIFGSIERFIGVLLEHYAGFLPVWLSPVQVKIIPIADKHLEYAETVKQKLLENDIRVELDDRNERMNKKIRDAELQKIPFMLVVGDKE 605
BLAST of CF509938 vs. ExPASy Swiss-Prot
Match: SYT_NITOC (Threonyl-tRNA synthetase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=thrS PE=3 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 9.228e-79 Identity = 140/231 (60.61%), Postives = 178/231 (77.06%), Query Frame = 3 Query: 3 LHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNLSTKPEKAVGGNDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKE 692 LHGL RVRGFTQDDAHIFC E+QI++EI +LDLT E+L FGF++YE++LST+PEK+VG IWE+AT ALR ALD KG DY +DEGGGAFYGPKID+KIEDA+GRKWQCST+Q+DFNLP+RF + YV + + RPIMIHRAVLGSLERFFGVLIEHY G FP WL+P+Q V+ +TD Q Y +V + ++ G R+ + E++ IR ++IP + V+G +E Sbjct: 371 LHGLMRVRGFTQDDAHIFCREEQIENEILGILDLTLEMLAAFGFDRYEIDLSTRPEKSVGPEAIWEQATQALRSALDKKGLDYAVDEGGGAFYGPKIDIKIEDAIGRKWQCSTVQLDFNLPERFAMEYVAEDGARHRPIMIHRAVLGSLERFFGVLIEHYEGKFPPWLAPVQVVVMSITDRQEGYARQVEEAMRNKGFRSLLDLRNEKIGFKIREHILRRIPYLLVIGDRE 601
BLAST of CF509938 vs. ExPASy Swiss-Prot
Match: SYT_MAGSM (Threonyl-tRNA synthetase OS=Magnetococcus sp. (strain MC-1) GN=thrS PE=3 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 2.685e-78 Identity = 137/231 (59.31%), Postives = 177/231 (76.62%), Query Frame = 3 Query: 3 LHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNLSTKPEKAVGGNDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKE 692 LHGLFRVRGFTQDDAHIFC E QI++EI+ +LDLT +IL +GF+ +E+NLST+PEK+VG IW+KAT ALR A+ + Y +DEGGGAFYGPKID+KI D++GRKWQCST+Q+DFNLP+RFD+ Y+ + E RPIMIHRA++GSLERFFG+L+EHYAG FP+WL+P+QA V +TD Q Y V+ LK G+R EI E++ IR +++P + VVG KE Sbjct: 372 LHGLFRVRGFTQDDAHIFCTEQQIEEEIQRILDLTLDILRTYGFSDFEINLSTRPEKSVGSAAIWDKATEALRRAIVSRDLSYVVDEGGGAFYGPKIDVKITDSIGRKWQCSTVQLDFNLPERFDMGYIGEDGESHRPIMIHRALMGSLERFFGILVEHYAGWFPMWLAPVQAVVCSITDAQHAYAETVLAALKKAGLRVEIDLRNEKVGYKIREHTLKRVPYLLVVGDKE 602
BLAST of CF509938 vs. ExPASy Swiss-Prot
Match: SYT_ACIF5 (Threonyl-tRNA synthetase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=thrS PE=3 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 2.778e-75 Identity = 135/231 (58.44%), Postives = 174/231 (75.32%), Query Frame = 3 Query: 3 LHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNLSTKPEKAVGGNDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKIPLMAVVGAKE 692 LHGL RVRGFTQDDAH+FC DQI+ EI AVL L +IL FGF++YE+NLST+P +VG ++IW+ AT ALR+AL+ G +YQ+D GGGAFYGPKIDLKI+DA+GRKWQCST+Q+DFNLP+RF + YV + +K PIM+HRA+ GS+ERFFGVLIEHY G FP+WL+P+QA VLP+++ EY V L GIRAE E++ IR +++P + VVG +E Sbjct: 371 LHGLMRVRGFTQDDAHVFCRPDQIEAEIGAVLVLVRKILGTFGFDQYEINLSTRPGHSVGSDEIWDAATQALRNALERAGLEYQVDAGGGAFYGPKIDLKIQDAIGRKWQCSTVQLDFNLPERFAMEYVAEDGARKVPIMVHRAIFGSIERFFGVLIEHYEGKFPVWLAPVQAVVLPISEHYSEYAESVSDVLVKRGIRAETDLRNEKIGYKIRAHTLRRVPYLLVVGERE 601 The following BLAST results are available for this feature:
BLAST of CF509938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509938 ID=CF509938; Name=CF509938; organism=Citrus sinensis; type=EST; length=692bpback to top |