CF509939
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF509939 vs. ExPASy Swiss-Prot
Match: TLP8_ARATH (Tubby-like protein 8 OS=Arabidopsis thaliana GN=TULP8 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.928e-29 Identity = 76/145 (52.41%), Postives = 94/145 (64.83%), Query Frame = 2 Query: 251 IDNSIFNKDGGDRENAAP----------KNGLALKSLSTNRWSGAEVPIRQVSHFKSLST--ERILKPSSLEFCMQMN-EPDKA-FGSRVWDPTESENSSSLNIWDYSDSEAAPASSWSTLPNRALLSRPLPLDIGRCTCVIVKE 643 I S+ + G D+EN +P K ALKS S SG +V++FKS ST LK SSL+ CMQ N E DK+ FG + W +SE+SSSL +W++SDSEAAPASSWSTLPNRALL + LPLD+GRCTC+IVKE Sbjct: 21 ITGSLSTQKGEDKENVSPEKVSTSVETRKLDRALKSQSMKGNSGFPT---EVTNFKSFSTGGRTALKQSSLQACMQKNSEVDKSSFGMKTWTSVDSEHSSSLKVWEFSDSEAAPASSWSTLPNRALLCKTLPLDVGRCTCLIVKE 162
BLAST of CF509939 vs. ExPASy Swiss-Prot
Match: TLP4_ORYSJ (Tubby-like protein 4 OS=Oryza sativa subsp. japonica GN=TULP4 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 4.406e-16 Identity = 38/53 (71.70%), Postives = 42/53 (79.25%), Query Frame = 2 Query: 485 PTESENSSSLNIWDYSDSEAAPASSWSTLPNRALLSRPLPLDIGRCTCVIVKE 643 P SSS WD SD+EAAPASSW+TLPNRALL RPLPLD+GRCTC+I KE Sbjct: 126 PLPLPTSSSYEAWDLSDNEAAPASSWATLPNRALLCRPLPLDVGRCTCIIAKE 178 The following BLAST results are available for this feature:
BLAST of CF509939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509939 ID=CF509939; Name=CF509939; organism=Citrus sinensis; type=EST; length=648bpback to top |