CF509942
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF509942 vs. ExPASy Swiss-Prot
Match: FAR1_ARATH (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1) HSP 1 Score: 311.227 bits (796), Expect = 2.427e-84 Identity = 140/189 (74.07%), Postives = 168/189 (88.89%), Query Frame = 2 Query: 11 LYEDRKRWVPTYMGDTFLAGMSTTQRSESMNSFFDKYIHKKITLKEFVKQYGNILQNRYEEEAIADFDTWHKQPALKSPSPWEKQMSTVYTHTIFKKFQVEVLGVVGCHPKKSSEDGTIVTYKVQDCEKEEDFMVTWNELKSEVSCFCCLFEYKGFLCRHAMIVLQICGRSSIPPQYILKGGPKMQKAG 577 L+E R++WVPT+M D FLAGMST+QRSES+NSFFDKYIHKKITLKEF++QYG ILQNRYEEE++ADFDT HKQPALKSPSPWEKQM+T YTHTIFKKFQVEVLGVV CHP+K ED + T++VQDCEK++DF+VTW++ KSE+ CFC +FEYKGFLCRHA+++LQ+CG +SIPPQYILK K K+G Sbjct: 423 LHEHRQKWVPTFMSDVFLAGMSTSQRSESVNSFFDKYIHKKITLKEFLRQYGVILQNRYEEESVADFDTCHKQPALKSPSPWEKQMATTYTHTIFKKFQVEVLGVVACHPRKEKEDENMATFRVQDCEKDDDFLVTWSKTKSELCCFCRMFEYKGFLCRHALMILQMCGFASIPPQYILKRWTKDAKSG 611
BLAST of CF509942 vs. ExPASy Swiss-Prot
Match: FHY3_ARATH (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana GN=FHY3 PE=1 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 1.580e-67 Identity = 117/189 (61.90%), Postives = 148/189 (78.31%), Query Frame = 2 Query: 8 SLYEDRKRWVPTYMGDTFLAGMSTTQRSESMNSFFDKYIHKKITLKEFVKQYGNILQNRYEEEAIADFDTWHKQPALKSPSPWEKQMSTVYTHTIFKKFQVEVLGVVGCHPKKSSEDGTIVTYKVQDCEKEEDFMVTWNELKSEVSCFCCLFEYKGFLCRHAMIVLQICGRSSIPPQYILKGGPKMQKA 574 SLYEDRK+W PTYM D LAGMST+QR++S+N+FFDKY+HKK +++EFVK Y +LQ+R EEEA AD + W+KQPA+KSPSP+EK +S VYT +FKKFQ+EVLG + C P++ + D T T++VQD E +DFMVTWN+ K+EVSC C LFEYKG+LCRH + VLQ C SSIP QYILK K K+ Sbjct: 431 SLYEDRKKWAPTYMTDVLLAGMSTSQRADSINAFFDKYMHKKTSVQEFVKVYDTVLQDRCEEEAKADSEMWNKQPAMKSPSPFEKSVSEVYTPAVFKKFQIEVLGAIACSPREENRDATCSTFRVQDFENNQDFMVTWNQTKAEVSCICRLFEYKGYLCRHTLNVLQCCHLSSIPSQYILKRWTKDAKS 619
BLAST of CF509942 vs. ExPASy Swiss-Prot
Match: FRS1_ARATH (Protein FAR1-RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=FRS1 PE=1 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 6.020e-59 Identity = 113/192 (58.85%), Postives = 138/192 (71.88%), Query Frame = 2 Query: 5 RSLYEDRKRWVPTYMGDTFLAGMSTTQRSESMNSFFDKYIHKKITLKEFVKQYGNILQNRYEEEAIADFDTWHKQPALKSPSPWEKQMSTVYTHTIFKKFQVEVLGVVGCHPKKSSEDGTI--VTYKVQDCEKEEDFMVTWNELKSEVSCFCCLFEYKGFLCRHAMIVLQICGRSSIPPQYILKGGPKMQKA 574 +SLYEDR+ WVP YM D LAGM T QRS+S+NS DKYI +K T K F++QY ++Q RYEEE ++ +T +KQP LKSPSP+ KQM+ VYT +FKKFQVEVLG V CHPKK SE+ + T++VQD E+ F+V WN SEV C C LFE KGFLCRHAMIVLQ+ G SIP QY+LK K K+ Sbjct: 304 QSLYEDREYWVPVYMKDVSLAGMCTAQRSDSVNSGLDKYIQRKTTFKAFLEQYKKMIQERYEEEEKSEIETLYKQPGLKSPSPFGKQMAEVYTREMFKKFQVEVLGGVACHPKKESEEDGVNKRTFRVQDYEQNRSFVVVWNSESSEVVCSCRLFELKGFLCRHAMIVLQMSGELSIPSQYVLKRWTKDAKS 495
BLAST of CF509942 vs. ExPASy Swiss-Prot
Match: FRS4_ARATH (Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana GN=FRS4 PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 1.936e-57 Identity = 102/182 (56.04%), Postives = 137/182 (75.27%), Query Frame = 2 Query: 5 RSLYEDRKRWVPTYMGDTFLAGMSTTQRSESMNSFFDKYIHKKITLKEFVKQYGNILQNRYEEEAIADFDTWHKQPALKSPSPWEKQMSTVYTHTIFKKFQVEVLGVVGCHPKKSSEDGTIVTYKVQDCEKEEDFMVTWNELKSEVSCFCCLFEYKGFLCRHAMIVLQICGRSSIPPQYILK 550 RSLYE+RK W PT+M AG+S RSES+NS FD+Y+H + +LKEF++ YG +L++RYEEEA ADFD WH+ P LKSPSP+EKQM VY+H IF++FQ+EVLG CH K SE+GT TY V+D + E+ ++V W+E KS++ C C FEYKG+LCRHA++VLQ+ G +IP Y+L+ Sbjct: 358 RSLYEERKFWAPTFMRGITFAGLSMRCRSESVNSLFDRYVHPETSLKEFLEGYGLMLEDRYEEEAKADFDAWHEAPELKSPSPFEKQMLLVYSHEIFRRFQLEVLGAAACHLTKESEEGT--TYSVKDFDDEQKYLVDWDEFKSDIYCSCRSFEYKGYLCRHAIVVLQMSGVFTIPINYVLQ 537
BLAST of CF509942 vs. ExPASy Swiss-Prot
Match: FRS2_ARATH (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=FRS2 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 8.733e-42 Identity = 84/180 (46.67%), Postives = 114/180 (63.33%), Query Frame = 2 Query: 11 LYEDRKRWVPTYMGDTFLAGMSTTQRSESMNSFFDKYIHKKITLKEFVKQYGNILQNRYEEEAIADFDTWHKQPALKSPSPWEKQMSTVYTHTIFKKFQVEVLGVVGCHPKKSSEDGTIVTYKVQDCEKEEDFMVTWNELKSEVSCFCCLFEYKGFLCRHAMIVLQICGRSSIPPQYILK 550 L+ DRK+WVP Y LAG+S +RS S+ S FDKY++ + T K+F + Y LQ R + EA D + KQP L+S +EKQ+S +YT FKKFQ EV GVV C +K EDGT ++++D E+ ++F V N + C C LFEY+GFLC+HA++VLQ S +P QYILK Sbjct: 367 LFRDRKKWVPHYFHGICLAGLSGPERSGSIASHFDKYMNSEATFKDFFELYMKFLQYRCDVEAKDDLEYQSKQPTLRSSLAFEKQLSLIYTDAAFKKFQAEVPGVVSCQLQKEREDGTTAIFRIEDFEERQNFFVALNNELLDACCSCHLFEYQGFLCKHAILVLQSADVSRVPSQYILK 546
BLAST of CF509942 vs. ExPASy Swiss-Prot
Match: FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.334e-41 Identity = 78/183 (42.62%), Postives = 117/183 (63.93%), Query Frame = 2 Query: 5 RSLYEDRKRWVPTYMGDTFLAGMSTTQRSESMNSFFDKYIHKKITLKEFVKQYGNILQNRYEEEAIADFDTWHKQPALKSPSPWEKQMSTVYTHTIFKKFQVEVLGVVGCHPKKSSEDGTIVTYKVQDC-EKEEDFMVTWNELKSEVSCFCCLFEYKGFLCRHAMIVLQICGRSSIPPQYILK 550 +++Y DR++WVP Y+ DTF A MS T RS+S+NS+FD YI+ L +F K Y L++R E+E AD+DT + P LK+PSP EKQ S +YT +F +FQ E++G + K+ +DG +VTY+V E + V +N L+ +C C +FE+ G +CRH + V ++ ++PP YILK Sbjct: 445 QAIYSDRRQWVPVYLRDTFFADMSLTHRSDSINSYFDGYINASTNLSQFFKLYEKALESRLEKEVKADYDTMNSPPVLKTPSPMEKQASELYTRKLFMRFQEELVGTLTFMASKADDDGDLVTYQVAKYGEAHKAHFVKFNVLEMRANCSCQMFEFSGIICRHILAVFRVTNLLTLPPYYILK 627
BLAST of CF509942 vs. ExPASy Swiss-Prot
Match: FRS6_ARATH (Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=FRS6 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.493e-33 Identity = 74/190 (38.95%), Postives = 109/190 (57.37%), Query Frame = 2 Query: 5 RSLYEDRKRWVPTYMGDTFLAGMSTTQRSESMNSFFDKYIHKKITLKEFVKQYGNILQNRYEEEAIADFDTWHKQPA-LKSPSPWEKQMSTVYTHTIFKKFQVEVLGVVGCHPKKSSE-DGTIVTYKVQDCEKEE-------DFMVTWNELKSEVSCFCCLFEYKGFLCRHAMIVLQICGRSSIPPQYIL 547 RSLYE+R +W P Y+ DTF AG++ E++ FF++Y+HK+ LKEF+ +Y LQ ++ EE ++D ++ A LK+ +E Q+S +YT +FKKFQ+EV + C DG V + V++ + E DF V +N EV C C F + G+LCRHA+ VL G IP +YIL Sbjct: 441 RSLYEERAKWAPVYLKDTFFAGIAAAHPGETLKPFFERYVHKQTPLKEFLDKYELALQKKHREETLSDIESQTLNTAELKTKCSFETQLSRIYTRDMFKKFQIEVEEMYSCFSTTQVHVDGPFVIFLVKERVRGESSRREIRDFEVLYNRSVGEVRCICSCFNFYGYLCRHALCVLNFNGVEEIPLRYIL 630
BLAST of CF509942 vs. ExPASy Swiss-Prot
Match: FRS3_ARATH (Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana GN=FRS3 PE=2 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 6.080e-29 Identity = 65/182 (35.71%), Postives = 104/182 (57.14%), Query Frame = 2 Query: 8 SLYEDRKRWVPTYMGDTFLAGMSTTQRSESMNSFFDKYIHKKITLKEFVKQYGNILQNRYEEEAIADFDTWHKQPALKSPSPWEKQMSTVYTHTIFKKFQVEVLGVVGCHPKKSSEDGTIVTYKVQDCEKE-EDFMVTWNELKSEVSCFCCLFEYKGFLCRHAMIVLQICGRSSIPPQYILK 550 SLY R +WVP Y D+F A + +Q SFFD Y++++ TL F + Y +++ +E E AD DT + P LK+PSP E Q + ++T IF KFQ E++ + +DGT T++V + E + + ++VT+ + +C C +FE+ G LCRH + V + ++PP YIL+ Sbjct: 393 SLYNARAQWVPVYFRDSFFAAVFPSQGYSG--SFFDGYVNQQTTLPMFFRLYERAMESWFEMEIEADLDTVNTPPVLKTPSPMENQAANLFTRKIFGKFQEELVETFAHTANRIEDDGTTSTFRVANFENDNKAYIVTFCYPEMRANCSCQMFEHSGILCRHVLTVFTVTNILTLPPHYILR 572 HSP 2 Score: 21.557 bits (44), Expect = 6.080e-29 Identity = 8/21 (38.10%), Postives = 12/21 (57.14%), Query Frame = 1 Query: 529 PTSVYFERWTKDAKSRLLISE 591 P RWT++AKS + + E Sbjct: 566 PPHYILRRWTRNAKSMVELDE 586
BLAST of CF509942 vs. ExPASy Swiss-Prot
Match: FRS9_ARATH (Protein FAR1-RELATED SEQUENCE 9 OS=Arabidopsis thaliana GN=FRS9 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.467e-28 Identity = 62/190 (32.63%), Postives = 106/190 (55.79%), Query Frame = 2 Query: 5 RSLYEDRKRWVPTYMGDTFLAGMSTTQRSESMNSFFDKYIHKKITLKEFVKQYGNILQNRYEEEAIADFDTWHKQPALKSPSPWEKQMSTVYTHTIFKKFQVEVLGVVGCHPKKSSEDGTIVTYKVQDC-EKEEDFMVTWNELKSEVSCFCCLFEYKGFLCRHAMIVLQICGRSSIPPQYILKGGPKMQK 571 +S+Y R++WV ++ DTF +ST + S +NSFF ++ T++ +KQY + + E+E AD++ + P +K+PSP EKQ +++YT F KFQ E + + S+ GT TY+V E + V+++ L+ + +C C +FEY G +CRH + V ++P +Y+L+ K K Sbjct: 196 QSIYNARQQWVRVFIRDTFYGELSTNEGSSILNSFFQGFVDASTTMQMLIKQYEKAIDSWREKELKADYEATNSTPVMKTPSPMEKQAASLYTRAAFIKFQEEFVETLAIPANIISDSGTHTTYRVAKFGEVHKGHTVSFDSLEVKANCSCQMFEYSGIICRHILAVFSAKNVLALPSRYLLRRWTKEAK 385
BLAST of CF509942 vs. ExPASy Swiss-Prot
Match: FRS8_ARATH (Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis thaliana GN=FRS8 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.599e-27 Identity = 67/189 (35.45%), Postives = 106/189 (56.08%), Query Frame = 2 Query: 5 RSLYEDRKRWVPTYMGDTFLAGMSTTQRSESMNSF-FDKYIHKKITLKEFVKQYGNILQNRYEEEAIADFDTWHKQPALKSPSPWEKQMSTVYTHTIFKKFQVEVLGVVGCH-PKKSSEDGTIVTYKVQDCE--KEEDFMVTW-NELKSEVSCFCCL--FEYKGFLCRHAMIVLQICGRSSIPPQYILK 550 R +++DR+ W P Y+ DTFLAG T F F Y+H+ +L+EF++ Y + L +Y EA+ D ++ P LK+ P+E QM+ V+T IF++FQ EV + C + +G+ +Y V++ E K DF V + ++V CFC F + G+ CRH +++L G +PPQYIL+ Sbjct: 437 RDMFQDRELWAPVYLKDTFLAGALTFPLGNVAAPFIFSGYVHENTSLREFLEGYESFLDKKYTREALCDSESLKLIPKLKTTHPYESQMAKVFTMEIFRRFQDEVSAMSSCFGVTQVHSNGSASSYVVKEREGDKVRDFEVIYETSAAAQVRCFCVCGGFSFNGYQCRHVLLLLSHNGLQEVPPQYILQ 625 The following BLAST results are available for this feature:
BLAST of CF509942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509942 ID=CF509942; Name=CF509942; organism=Citrus sinensis; type=EST; length=594bpback to top |