CF509943

Overview
NameCF509943
Unique NameCF509943
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length480
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig930 contig Csv1_Contig930:1..480. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF509943 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 6.257e-75
Identity = 132/159 (83.02%), Postives = 148/159 (93.08%), Query Frame = 1
Query:    4 KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPN 480
            K+EFE QMEV+GKIKH NV+PLRA+YYSKDEKLLV+D+MP GSLSALLHGSRGSGRTPLDWDNRMRIA++AARGLAHLHVS K+VHGNIKASNILL P+ D CVSD+GLN LF N++PP R+AGY APEV+ETRKVTFKSDVYSFGVLLLELLTGK+PN
Sbjct:  388 KKEFETQMEVVGKIKHPNVIPLRAYYYSKDEKLLVFDFMPTGSLSALLHGSRGSGRTPLDWDNRMRIAITAARGLAHLHVSAKLVHGNIKASNILLHPNQDTCVSDYGLNQLFSNSSPPNRLAGYHAPEVLETRKVTFKSDVYSFGVLLLELLTGKSPN 546          
BLAST of CF509943 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 1.400e-58
Identity = 107/162 (66.05%), Postives = 135/162 (83.33%), Query Frame = 1
Query:    1 GKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG--KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 477
            GKREFE QME++ ++  H +VVPLRA+YYSKDEKL+V DY PAG+LS+LLHG+RGS +TPLDWD+R++I LSAA+G+AHLH +G  K  HGNIK+SN++++ + DAC+SDFGL PL      P R AGYRAPEV+ETRK T KSDVYSFGVL+LE+LTGK+P
Sbjct:  394 GKREFEQQMEIISRVGNHPSVVPLRAYYYSKDEKLMVCDYYPAGNLSSLLHGNRGSEKTPLDWDSRVKITLSAAKGIAHLHAAGGPKFSHGNIKSSNVIMKQESDACISDFGLTPLMAVPIAPMRGAGYRAPEVMETRKHTHKSDVYSFGVLILEMLTGKSP 555          
BLAST of CF509943 vs. ExPASy Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 1.771e-53
Identity = 100/162 (61.73%), Postives = 128/162 (79.01%), Query Frame = 1
Query:    1 GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV--SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP-TRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 477
            GKR+FE QME++G IKH+NVV L+A+YYSKDEKL+VYDY   GS+++LLHG+RG  R PLDW+ RM+IA+ AA+G+A +H   +GK+VHGNIK+SNI L  + + CVSD GL  +     PP +R AGYRAPEV +TRK +  SDVYSFGV+LLELLTGK+P
Sbjct:  373 GKRDFEQQMEIIGGIKHENVVELKAYYYSKDEKLMVYDYFSRGSVASLLHGNRGENRIPLDWETRMKIAIGAAKGIARIHKENNGKLVHGNIKSSNIFLNSESNGCVSDLGLTAVMSPLAPPISRQAGYRAPEVTDTRKSSQLSDVYSFGVVLLELLTGKSP 534          
BLAST of CF509943 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.500e-52
Identity = 101/160 (63.12%), Postives = 130/160 (81.25%), Query Frame = 1
Query:    7 REFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG-KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT-TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPN 480
            +EF+ ++E++G + H+N+VPLRA+Y+S+DEKLLVYD+MP GSLSALLHG+RG+GR+PL+WD R RIA+ AARGL +LH  G    HGNIK+SNILL   HDA VSDFGL  L G++ T P R  GYRAPEV + ++V+ K DVYSFGV+LLEL+TGKAP+
Sbjct:  409 KEFKEKIELVGAMDHENLVPLRAYYFSRDEKLLVYDFMPMGSLSALLHGNRGAGRSPLNWDVRSRIAIGAARGLDYLHSQGTSTSHGNIKSSNILLTKSHDAKVSDFGLAQLVGSSATNPNRATGYRAPEVTDPKRVSQKGDVYSFGVVLLELITGKAPS 568          
BLAST of CF509943 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 6.300e-51
Identity = 101/160 (63.12%), Postives = 127/160 (79.38%), Query Frame = 1
Query:    7 REFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI-VHGNIKASNILLRPDHDACVSDFGLNPLF-GNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPN 480
            REF+ ++EV+G + H+N+VPLRA+YYS DEKLLVYD+MP GSLSALLHG++G+GR PL+W+ R  IAL AARGL +LH    +  HGN+K+SNILL   HDA VSDFGL  L   ++T P R  GYRAPEV + R+V+ K+DVYSFGV+LLELLTGKAP+
Sbjct:  403 REFKEKIEVVGAMDHENLVPLRAYYYSGDEKLLVYDFMPMGSLSALLHGNKGAGRPPLNWEVRSGIALGAARGLDYLHSQDPLSSHGNVKSSNILLTNSHDARVSDFGLAQLVSASSTTPNRATGYRAPEVTDPRRVSQKADVYSFGVVLLELLTGKAPS 562          
BLAST of CF509943 vs. ExPASy Swiss-Prot
Match: Y3868_ARATH (Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 1.833e-50
Identity = 100/162 (61.73%), Postives = 122/162 (75.31%), Query Frame = 1
Query:    1 GKREFEMQMEVLGKIK-HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS--GKIVHGNIKASNILLRPDHDACVSDFGLNPLFG-NTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKA 474
            GKREFE QME +G+I  H NV PLRA+Y+SKDEKLLVYDY   G+ S LLHG+   GR  LDW+ R+RI L AARG++H+H +   K++HGNIK+ N+LL  +   CVSDFG+ PL   +T  P+R  GYRAPE +ETRK T KSDVYSFGVLLLE+LTGKA
Sbjct:  377 GKREFEQQMEAVGRISPHVNVAPLRAYYFSKDEKLLVYDYYQGGNFSMLLHGNNEGGRAALDWETRLRICLEAARGISHIHSASGAKLLHGNIKSPNVLLTQELHVCVSDFGIAPLMSHHTLIPSRSLGYRAPEAIETRKHTQKSDVYSFGVLLLEMLTGKA 538          
BLAST of CF509943 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.314e-48
Identity = 90/159 (56.60%), Postives = 125/159 (78.62%), Query Frame = 1
Query:    4 KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV-SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 477
            ++EF  ++ VLG + H N+V L A+Y+S+DEKLLV++YM  GSLSA+LHG++G+GRTPL+W+ R  IAL AAR +++LH   G   HGNIK+SNILL   ++A VSD+GL P+  +T+ P R+ GYRAPE+ + RK++ K+DVYSFGVL+LELLTGK+P
Sbjct:  382 EKEFRERLHVLGSMSHANLVTLIAYYFSRDEKLLVFEYMSKGSLSAILHGNKGNGRTPLNWETRAGIALGAARAISYLHSRDGTTSHGNIKSSNILLSDSYEAKVSDYGLAPIISSTSAPNRIDGYRAPEITDARKISQKADVYSFGVLILELLTGKSP 540          
BLAST of CF509943 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 7.209e-47
Identity = 90/159 (56.60%), Postives = 122/159 (76.73%), Query Frame = 1
Query:    4 KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV-SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 477
            ++EF  +++VLG I H N+V L A+Y+S+DEKL+V++YM  GSLSALLHG++GSGR+PL+W+ R  IAL AAR +++LH       HGNIK+SNILL    +A VSD+ L P+   T+ P R+ GYRAPEV + RK++ K+DVYSFGVL+LELLTGK+P
Sbjct:  380 EKEFREKLQVLGSISHANLVTLIAYYFSRDEKLVVFEYMSRGSLSALLHGNKGSGRSPLNWETRANIALGAARAISYLHSRDATTSHGNIKSSNILLSESFEAKVSDYCLAPMISPTSTPNRIDGYRAPEVTDARKISQKADVYSFGVLILELLTGKSP 538          
BLAST of CF509943 vs. ExPASy Swiss-Prot
Match: Y5516_ARATH (Probable receptor kinase At5g05160 OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 7.460e-44
Identity = 90/159 (56.60%), Postives = 117/159 (73.58%), Query Frame = 1
Query:    4 KREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 477
            K+EFE QME++GKI +H N VPL A+YYSKDEKLLVY YM  GSL  ++HG+RG     +DW+ RM+IA   ++ +++LH S K VHG+IK+SNILL  D + C+SD  L  LF   T   R  GY APEV+ETR+V+ +SDVYSFGV++LE+LTGK P
Sbjct:  384 KKEFEQQMEIVGKINQHSNFVPLLAYYYSKDEKLLVYKYMTKGSLFGIMHGNRGD--RGVDWETRMKIATGTSKAISYLH-SLKFVHGDIKSSNILLTEDLEPCLSDTSLVTLFNLPTHTPRTIGYNAPEVIETRRVSQRSDVYSFGVVILEMLTGKTP 539          
BLAST of CF509943 vs. ExPASy Swiss-Prot
Match: Y5332_ARATH (Probable inactive receptor kinase At5g53320 OS=Arabidopsis thaliana GN=At5g53320 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.008e-40
Identity = 84/160 (52.50%), Postives = 109/160 (68.12%), Query Frame = 1
Query:    4 KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRG-SGRTPLDWDNRMRIALSAARGLAHLH--VSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKA 474
            +REFE Q+E +G IKH+NV  LR ++YSKDEKL+VYDY   GSLS LLHG +G   R  L+W+ R+ +    ARG+AH+H    GK+VHGNIK+SNI L      C+S  G+  L  +   P    GYRAPE+ +TRK T  SDVYSFG+L+ E+LTGK+
Sbjct:  345 QREFEQQIENIGSIKHENVATLRGYFYSKDEKLVVYDYYEHGSLSTLLHGQKGLRDRKRLEWETRLNMVYGTARGVAHIHSQSGGKLVHGNIKSSNIFLNGKGYGCISGTGMATLMHSL--PRHAVGYRAPEITDTRKGTQPSDVYSFGILIFEVLTGKS 502          
The following BLAST results are available for this feature:
BLAST of CF509943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 424
Match NameE-valueIdentityDescription
Y2267_ARATH6.257e-7583.02Probable inactive receptor kinase At2g26730 OS=Ara... [more]
Y5830_ARATH1.400e-5866.05Probable inactive receptor kinase At5g58300 OS=Ara... [more]
Y4374_ARATH1.771e-5361.73Probable inactive receptor kinase At4g23740 OS=Ara... [more]
Y1848_ARATH1.500e-5263.13Probable inactive receptor kinase At1g48480 OS=Ara... [more]
RLK90_ARATH6.300e-5163.13Probable inactive receptor kinase RLK902 OS=Arabid... [more]
Y3868_ARATH1.833e-5061.73Probable inactive receptor kinase At3g08680 OS=Ara... [more]
Y3288_ARATH1.314e-4856.60Probable inactive receptor kinase At3g02880 OS=Ara... [more]
Y5659_ARATH7.209e-4756.60Probable inactive receptor kinase At5g16590 OS=Ara... [more]
Y5516_ARATH7.460e-4456.60Probable receptor kinase At5g05160 OS=Arabidopsis ... [more]
Y5332_ARATH1.008e-4052.50Probable inactive receptor kinase At5g53320 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-455 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509943 ID=CF509943; Name=CF509943; organism=Citrus sinensis; type=EST; length=480bp
GGCAAACGAGAGTTCGAGATGCAAATGGAGGTTTTGGGCAAGATTAAGCA
CGATAATGTAGTTCCTTTGAGGGCTTTTTACTATTCTAAAGATGAAAAGT
TGCTTGTTTATGATTACATGCCTGCCGGTAGCTTATCCGCTCTCCTTCAC
GGGAGTAGAGGTTCGGGCCGTACCCCGCTAGACTGGGACAACCGGATGAG
AATAGCACTAAGTGCGGCACGGGGTTTGGCCCACCTCCACGTGTCAGGAA
AAATAGTTCACGGGAACATAAAAGCCTCCAACATCCTGCTCCGACCTGAC
CACGATGCATGTGTTTCCGATTTCGGATTGAACCCGCTATTCGGTAACAC
GACTCCGCCCACCCGCGTGGCTGGGTATCGTGCCCCAGAAGTGGTCGAGA
CCCGCAAGGTCACATTCAAATCCGACGTGTACAGTTTCGGTGTTTTGTTG
TTAGAGCTATTAACGGGCAAAGCACCTAAT
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