CF509952
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509952 vs. ExPASy Swiss-Prot
Match: SYP31_ARATH (Syntaxin-31 OS=Arabidopsis thaliana GN=SYP31 PE=1 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 1.582e-65 Identity = 130/202 (64.36%), Postives = 155/202 (76.73%), Query Frame = 2 Query: 5 SQKIARLAKLAKRSSMFDDPIVEIQELTALIKDDITALNMALSDLQTLQNLEIAEGNYSQDRVVHSTTVCDDLKSKLMGATKELQDVLTTRTENIKAHENRKQIFSANALRDSPFRQHAQPVTEPPPWSSPVNASESSQPSALPPGGVQVGNQLRLPPGGVQVGNQLRRRPAVDNAPSHHMEMSMLQQVVPRQENYSQSRAV 610 SQKI RLAKLAK+S++F+D VEIQELT LI++DIT LNMALSDLQTLQN+E+A+GNYSQD+V H T VCDDLK++LMGATK+LQDVLTTR+EN+KAHENRKQ+FS DSP + +A+ V EPPPWSS N + Q LPP G G+QLRRR A++NAPS MEMS+LQQ VP+QENYSQSRAV Sbjct: 62 SQKITRLAKLAKQSTIFNDRTVEIQELTVLIRNDITGLNMALSDLQTLQNMELADGNYSQDQVGHYTAVCDDLKTRLMGATKQLQDVLTTRSENMKAHENRKQLFSTKNAVDSPPQNNAKSVPEPPPWSSSSNPFGNLQQPLLPPLNT-----------GAPPGSQLRRRSAIENAPSQQMEMSLLQQTVPKQENYSQSRAV 252
BLAST of CF509952 vs. ExPASy Swiss-Prot
Match: SYP32_ARATH (Syntaxin-32 OS=Arabidopsis thaliana GN=SYP32 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.218e-34 Identity = 92/204 (45.10%), Postives = 122/204 (59.80%), Query Frame = 2 Query: 5 SQKIARLAKLAKRSSMFDDPIVEIQELTALIKDDITALNMALSDLQTLQNLEIAEGNYSQDR--VVHSTTVCDDLKSKLMGATKELQDVLTTRTENIKAHENRKQIFSANALRDSPFRQHAQPVTEPPPWSSPVNASESSQPSALPPGGVQVGNQL-RLPPGGVQVGNQLRRRPAVDNAPSHHMEMSMLQQVVPRQENYSQSRA 607 SQK+++LAKLAKR+S+FDDP EIQELT +IK +I+ALN AL DLQ ++ + EGN S+DR HS TV DDLK +LM TKE +DVLT RTEN+K HE+R+Q+FS+NA ++S P P ++ ASE S P G +QL PG + L++ S + QQ+VP Q+ Y Q RA Sbjct: 73 SQKLSKLAKLAKRTSVFDDPTQEIQELTVVIKQEISALNSALVDLQLFRSSQNDEGNNSRDRDKSTHSATVVDDLKYRLMDTTKEFKDVLTMRTENMKVHESRRQLFSSNASKES-----TNPFVRQRPLAAKAAASE-SVPLPWANGSSSSSSQLVPWKPGEGESSPLLQQ--------SQQQQQQQQQQMVPLQDTYMQGRA 262
BLAST of CF509952 vs. ExPASy Swiss-Prot
Match: STX5_RAT (Syntaxin-5 OS=Rattus norvegicus GN=Stx5 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.169e-14 Identity = 45/105 (42.86%), Postives = 64/105 (60.95%), Query Frame = 2 Query: 11 KIARLAKLAKRSSMFDDPIVEIQELTALIKDDITALNMALSDLQTLQNLEIAEGNYSQDRV-VHSTTVCDDLKSKLMGATKELQDVLTTRTENIKAHENRKQIFS 322 K+ +L LAKR S+FDD VEI+ELT +IK DI +LN ++ LQ A+G+ S + HS T+ L+SKL + + + VL RTEN+K NR++ FS Sbjct: 111 KLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVR---AKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRNRREQFS 212
BLAST of CF509952 vs. ExPASy Swiss-Prot
Match: STX5_MOUSE (Syntaxin-5 OS=Mus musculus GN=Stx5 PE=2 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 2.169e-14 Identity = 45/105 (42.86%), Postives = 64/105 (60.95%), Query Frame = 2 Query: 11 KIARLAKLAKRSSMFDDPIVEIQELTALIKDDITALNMALSDLQTLQNLEIAEGNYSQDRV-VHSTTVCDDLKSKLMGATKELQDVLTTRTENIKAHENRKQIFS 322 K+ +L LAKR S+FDD VEI+ELT +IK DI +LN ++ LQ A+G+ S + HS T+ L+SKL + + + VL RTEN+K NR++ FS Sbjct: 111 KLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVR---AKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRNRREQFS 212
BLAST of CF509952 vs. ExPASy Swiss-Prot
Match: STX5_BOVIN (Syntaxin-5 OS=Bos taurus GN=STX5 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.831e-14 Identity = 66/200 (33.00%), Postives = 97/200 (48.50%), Query Frame = 2 Query: 11 KIARLAKLAKRSSMFDDPIVEIQELTALIKDDITALNMALSDLQTLQNLEIAEGNYSQDRV-VHSTTVCDDLKSKLMGATKELQDVLTTRTENIKAHENRKQIFSANALRDSPFRQHAQPVTEPPPWSSPVNASESSQPSALPPGGVQVGNQLRLPPGGVQVGNQLRRRPAVDNAPSHHMEMSMLQQVVPRQENYSQSRA 607 K+ +L LAKR S+FDD VEI+ELT +IK DI +LN ++ LQ A+G+ S + HS T+ L+SKL + + + VL RTEN+K +R++ FS +PV+A + P+ L G V +G + R G V A+D S S Q++ Q++Y QSRA Sbjct: 111 KLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVR---AKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFS----------------------RAPVSALPLA-PNHLGGGAVVLGAESR-ASGDV----------AIDMMDS---RTSQQLQLIDEQDSYIQSRA 270
BLAST of CF509952 vs. ExPASy Swiss-Prot
Match: STX5_HUMAN (Syntaxin-5 OS=Homo sapiens GN=STX5 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 8.241e-14 Identity = 44/105 (41.90%), Postives = 64/105 (60.95%), Query Frame = 2 Query: 11 KIARLAKLAKRSSMFDDPIVEIQELTALIKDDITALNMALSDLQTLQNLEIAEGNYSQDRV-VHSTTVCDDLKSKLMGATKELQDVLTTRTENIKAHENRKQIFS 322 K+ +L LAKR S+FDD VEI+ELT +IK DI +LN ++ LQ A+G+ S + HS T+ L+SKL + + + VL RTEN+K +R++ FS Sbjct: 111 KLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVR---AKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFS 212
BLAST of CF509952 vs. ExPASy Swiss-Prot
Match: SED5_SCHPO (Integral membrane protein sed5 OS=Schizosaccharomyces pombe GN=sed5 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.190e-12 Identity = 46/134 (34.33%), Postives = 72/134 (53.73%), Query Frame = 2 Query: 8 QKIARLAKLAKRSSMFDDPIVEIQELTALIKDDITALNMALSDLQTLQNLEIAEGNYSQDRVVHSTTVCDDLKSKLMGATKELQDVLTTRTENIKAHENRKQIFSANALRD-----------SPFRQHAQPVTE 376 +K+ +L++LAKR ++FDD VEIQELT IK +++LN SD+ +LQ + N HS V L++ L + +D+L RT+N+KA +NR + F A++ + SPF + P E Sbjct: 59 EKLQKLSQLAKRKTLFDDRPVEIQELTFQIKQSLSSLN---SDIASLQQVVKGNRNKPAQMNQHSENVVVSLQNSLANTSMTFKDILEIRTQNMKASQNRTEKFVASSSMNANPLINSGNSISPFADYNDPKPE 189
BLAST of CF509952 vs. ExPASy Swiss-Prot
Match: STX5_DROME (Syntaxin-5 OS=Drosophila melanogaster GN=Syx5 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 7.713e-12 Identity = 40/104 (38.46%), Postives = 61/104 (58.65%), Query Frame = 2 Query: 11 KIARLAKLAKRSSMFDDPIVEIQELTALIKDDITALNMALSDLQTLQNLEIAEGNYSQDRVVHSTTVCDDLKSKLMGATKELQDVLTTRTENIKAHENRKQIFS 322 K+ +L LAK+ S+FDD EIQELT +IK D+ ALN ++ LQ + + N + V HS+ + L+SKL + + + +L RTEN+K + R+ FS Sbjct: 217 KLEKLTMLAKKKSLFDDRPQEIQELTYIIKGDLNALNQQIARLQDISKDQRRHTN-GKHLVSHSSNMVLALQSKLASMSTDFKQILEVRTENLKQQKTRRDQFS 319 The following BLAST results are available for this feature:
BLAST of CF509952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509952 ID=CF509952; Name=CF509952; organism=Citrus sinensis; type=EST; length=610bpback to top |