CF509953

Overview
NameCF509953
Unique NameCF509953
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length434
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1057 contig Csv1_Contig1057:69..499. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF509953 vs. ExPASy Swiss-Prot
Match: CFI_CITSI (Chalcone--flavonone isomerase OS=Citrus sinensis GN=CHI PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 1.929e-76
Identity = 139/144 (96.53%), Postives = 143/144 (99.31%), Query Frame = 1
Query:    1 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDE 432
            MNPSPSVTELQVENVTFTPS+QPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLE++AVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENC+AIWKFFGIYTDAEAKAIEKFT VFKDE
Sbjct:    1 MNPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDE 144          
BLAST of CF509953 vs. ExPASy Swiss-Prot
Match: CFI_GOSHI (Chalcone--flavonone isomerase OS=Gossypium hirsutum GN=CHI PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 3.305e-60
Identity = 114/144 (79.17%), Postives = 128/144 (88.89%), Query Frame = 1
Query:    1 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDE 432
            M+ S SVTELQVEN TF P+++PPGSTK+ FLGGAGERGLEI+GKF+KFTAIGVYLE++AV  L  KWKGK+A ELTESVEFFRDVVTG FEKF++VTMILPLTG QYSEKV+ENC+AIWK  GIYTDAEAKAIEKF  VFKDE
Sbjct:    1 MSTSLSVTELQVENFTFPPTVKPPGSTKTLFLGGAGERGLEIQGKFIKFTAIGVYLEDSAVNCLGVKWKGKSAVELTESVEFFRDVVTGDFEKFIRVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIEKFIEVFKDE 144          
BLAST of CF509953 vs. ExPASy Swiss-Prot
Match: CFI2_VITVI (Chalcone--flavonone isomerase 2 OS=Vitis vinifera GN=CHI2 PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 4.772e-59
Identity = 111/144 (77.08%), Postives = 122/144 (84.72%), Query Frame = 1
Query:    1 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDE 432
            M+P PSVT +QVENV F PS++PPGST   FLGGAG RGLEI+GKFVKFTAIGVYLE +AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIYTDAEAKAIEKF  V KDE
Sbjct:    1 MSPVPSVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLESSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDE 144          
BLAST of CF509953 vs. ExPASy Swiss-Prot
Match: CFI_PYRCO (Chalcone--flavonone isomerase OS=Pyrus communis GN=CHI PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 2.368e-58
Identity = 109/144 (75.69%), Postives = 123/144 (85.42%), Query Frame = 1
Query:    1 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDE 432
            M P PS+  LQVE   F PS++PPGS+ + FLGGAG RGLEI+G FVKFTAIGVYLE+NAVPLLA KWKGKTAEEL+ESVEFFRD+VTGPFEKF++VT ILPLTG QYSEKV+ENC+A WK  GIYTDAE KAIEKF  VFKD+
Sbjct:    1 MAPPPSLAGLQVEATAFPPSVKPPGSSNTLFLGGAGVRGLEIQGNFVKFTAIGVYLEDNAVPLLAVKWKGKTAEELSESVEFFRDIVTGPFEKFIQVTTILPLTGQQYSEKVSENCVAFWKSVGIYTDAEGKAIEKFIEVFKDQ 144          
BLAST of CF509953 vs. ExPASy Swiss-Prot
Match: CFI1_VITVI (Chalcone--flavonone isomerase 1 OS=Vitis vinifera GN=CHI1 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 4.040e-58
Identity = 110/144 (76.39%), Postives = 121/144 (84.03%), Query Frame = 1
Query:    1 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDE 432
            M+  PSVT +QVENV F PS++PPGST   FLGGAG RGLEI+GKFVKFTAIGVYLE +AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIYTDAEAKAIEKF  V KDE
Sbjct:    1 MSQVPSVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLENSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDE 144          
BLAST of CF509953 vs. ExPASy Swiss-Prot
Match: CFI_CAMSI (Chalcone--flavonone isomerase OS=Camellia sinensis GN=CHI PE=2 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 1.175e-57
Identity = 104/141 (73.76%), Postives = 124/141 (87.94%), Query Frame = 1
Query:   10 SPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDE 432
            SPSV ++Q+E+  F P+++PPG++K  FLGGAGERGLEI+GKF+KFTAIGVYLE++A+P LA KWKGKTAEELT+SV+FFRD+V+GPFEKF +VTMILPLTG QYSEKV ENC+A WK  G YTDAEAKAIEKF  VFKDE
Sbjct:    6 SPSVAQVQIESHVFPPTVKPPGTSKPFFLGGAGERGLEIQGKFIKFTAIGVYLEDSAIPSLAVKWKGKTAEELTDSVDFFRDIVSGPFEKFTQVTMILPLTGQQYSEKVTENCVAYWKAVGTYTDAEAKAIEKFIEVFKDE 146          
BLAST of CF509953 vs. ExPASy Swiss-Prot
Match: CFI1_FRAAN (Chalcone--flavonone isomerase 1 OS=Fragaria ananassa GN=CHI1 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 3.420e-57
Identity = 106/139 (76.26%), Postives = 122/139 (87.77%), Query Frame = 1
Query:   16 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDE 432
            SVT +Q+  ++F PS++PPGS  + FLGGAG RG+EI+G FVKFTAIGVYLE+ AVP LA KWKGKTAEELTESVEFFR++VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF  VFKD+
Sbjct:    4 SVTGIQIGGMSFPPSVKPPGSGNTFFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALAVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQ 142          
BLAST of CF509953 vs. ExPASy Swiss-Prot
Match: CFI_ELAUM (Chalcone--flavonone isomerase OS=Elaeagnus umbellata GN=CHI PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 5.834e-57
Identity = 104/139 (74.82%), Postives = 123/139 (88.49%), Query Frame = 1
Query:   16 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDE 432
            SVTE+QVE+V F P ++PPGS+K+ FLGGAG RG+EI+GKF+KFTAIGVYLE+NAVP LA KWKGK+A+ELTESVEFFRD+VTGP EKF +VT ILPLTG QYSEKV+ENC+A WK  GIY+DAEAKAIEKF  +FKD+
Sbjct:    7 SVTEVQVESVIFPPEVKPPGSSKTLFLGGAGVRGIEIQGKFIKFTAIGVYLEDNAVPSLAVKWKGKSAQELTESVEFFRDIVTGPMEKFTRVTTILPLTGQQYSEKVSENCVAAWKSLGIYSDAEAKAIEKFIEIFKDQ 145          
BLAST of CF509953 vs. ExPASy Swiss-Prot
Match: CFI2_FRAAN (Chalcone--flavonone isomerase 2 OS=Fragaria ananassa GN=CHI2 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 3.781e-56
Identity = 104/139 (74.82%), Postives = 121/139 (87.05%), Query Frame = 1
Query:   16 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDE 432
            SVT +Q+   +F P+++PPGS  + FLGGAG RG+EI+G FVKFTAIGVYLE+ AVP L+ KWKGKTAEELTESVEFFR++VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF  VFKD+
Sbjct:    4 SVTGIQIGGTSFPPAVKPPGSGNTLFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALSVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQ 142          
BLAST of CF509953 vs. ExPASy Swiss-Prot
Match: CFI1_PETHY (Chalcone--flavonone isomerase A OS=Petunia hybrida GN=CHI1 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 6.450e-56
Identity = 105/144 (72.92%), Postives = 119/144 (82.64%), Query Frame = 1
Query:    1 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDE 432
            M+P  SVT++QVEN  F P++ P GST + FL GAG RGLEIEGKFVKFTAIGVYLEE+A+P LA KWKGKT +ELT+SVEFFRDVVTGPFEKF +VTMILPLTG QYSEKVAENC+A WK  G YTD E +AIEKF  VF+ E
Sbjct:    1 MSPPVSVTKMQVENYAFAPTVNPAGSTNTLFLAGAGHRGLEIEGKFVKFTAIGVYLEESAIPFLAEKWKGKTPQELTDSVEFFRDVVTGPFEKFTRVTMILPLTGKQYSEKVAENCVAHWKGIGTYTDDEGRAIEKFLDVFRSE 144          
The following BLAST results are available for this feature:
BLAST of CF509953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_CITSI1.929e-7696.53Chalcone--flavonone isomerase OS=Citrus sinensis G... [more]
CFI_GOSHI3.305e-6079.17Chalcone--flavonone isomerase OS=Gossypium hirsutu... [more]
CFI2_VITVI4.772e-5977.08Chalcone--flavonone isomerase 2 OS=Vitis vinifera ... [more]
CFI_PYRCO2.368e-5875.69Chalcone--flavonone isomerase OS=Pyrus communis GN... [more]
CFI1_VITVI4.040e-5876.39Chalcone--flavonone isomerase 1 OS=Vitis vinifera ... [more]
CFI_CAMSI1.175e-5773.76Chalcone--flavonone isomerase OS=Camellia sinensis... [more]
CFI1_FRAAN3.420e-5776.26Chalcone--flavonone isomerase 1 OS=Fragaria ananas... [more]
CFI_ELAUM5.834e-5774.82Chalcone--flavonone isomerase OS=Elaeagnus umbella... [more]
CFI2_FRAAN3.781e-5674.82Chalcone--flavonone isomerase 2 OS=Fragaria ananas... [more]
CFI1_PETHY6.450e-5672.92Chalcone--flavonone isomerase A OS=Petunia hybrida... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-467 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_D07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509953 ID=CF509953; Name=CF509953; organism=Citrus sinensis; type=EST; length=434bp
ATGAATCCCTCACCGTCCGTCACCGAACTGCAGGTCGAGAACGTCACTTT
CACGCCGTCCCTGCAACCTCCAGGATCAACAAAGTCGCATTTCCTCGGCG
GCGCAGGGGAGAGAGGATTGGAGATTGAAGGGAAGTTCGTGAAGTTCACG
GCGATAGGAGTGTACTTGGAGGAGAACGCCGTGCCGTTACTCGCCGGCAA
ATGGAAGGGGAAGACTGCGGAGGAGTTGACGGAATCCGTTGAGTTCTTCA
GAGACGTCGTCACAGGTCCCTTTGAGAAATTCATGAAGGTGACAATGATC
TTGCCATTAACTGGTGCACAATACTCAGAGAAGGTTGCCGAAAATTGCAT
GGCCATATGGAAGTTTTTTGGAATTTACACAGATGCTGAAGCCAAAGCTA
TTGAAAAATTCACTGCGGTCTTTAAGGATGAAAT
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