CF509961

Overview
NameCF509961
Unique NameCF509961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length393
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig760 contig Csv1_Contig760:77..468. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF509961 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.426e-44
Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 2
Query:   53 MFGRAPKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGG 310
            MFGR PKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGG
Sbjct:    1 MFGR-PKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGG 85          

HSP 2 Score: 27.7202 bits (60), Expect = 1.426e-44
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 3
Query:  309 GGAHDPFDIFQ 341
            GG HDPFDIFQ
Sbjct:   84 GGGHDPFDIFQ 94          
BLAST of CF509961 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.568e-43
Identity = 77/86 (89.53%), Postives = 83/86 (96.51%), Query Frame = 2
Query:   53 MFGRAPKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGG 310
            MFGRAPKKSDNTKYYE+LGVSKNA+ +DLKKAYRKAAIKNHPDKGGDPEKFKE+ QAYEVL+DPEKREIYDQYGE+ LKEGMGGGG
Sbjct:    1 MFGRAPKKSDNTKYYEVLGVSKNATPEDLKKAYRKAAIKNHPDKGGDPEKFKEIGQAYEVLNDPEKREIYDQYGEEGLKEGMGGGG 86          

HSP 2 Score: 27.7202 bits (60), Expect = 7.568e-43
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 3
Query:  309 GGAHDPFDIFQ 341
            GG HDPFDIFQ
Sbjct:   86 GGVHDPFDIFQ 96          
BLAST of CF509961 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.705e-42
Identity = 78/86 (90.70%), Postives = 83/86 (96.51%), Query Frame = 2
Query:   53 MFGRAPKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGG 310
            MFGRAPKKSD+T+YYEILGV K+AS +DLKKAY+KAAIKNHPDKGGDPEKFKELA AYEVLSDPEKREIYDQYGEDALKEGMGGGG
Sbjct:    1 MFGRAPKKSDSTRYYEILGVPKDASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAHAYEVLSDPEKREIYDQYGEDALKEGMGGGG 86          

HSP 2 Score: 27.335 bits (59), Expect = 3.705e-42
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 3
Query:  309 GGAHDPFDIFQ 341
            GG HDPFDIFQ
Sbjct:   86 GGMHDPFDIFQ 96          
BLAST of CF509961 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 6.809e-41
Identity = 79/87 (90.80%), Postives = 83/87 (95.40%), Query Frame = 2
Query:   53 MFGRAP-KKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGG 310
            MFGR P KKSDNTK+YEILGV K+AS +DLKKAY+KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGG
Sbjct:    1 MFGRGPSKKSDNTKFYEILGVPKSASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGG 87          

HSP 2 Score: 25.7942 bits (55), Expect = 6.809e-41
Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 3
Query:  309 GGAHDPFDIF 338
            GG HDPFDIF
Sbjct:   87 GGGHDPFDIF 96          
BLAST of CF509961 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 4.340e-40
Identity = 77/87 (88.51%), Postives = 82/87 (94.25%), Query Frame = 2
Query:   53 MFGRAP-KKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGG 310
            MFGR P +KSDNTK+YEILGV K A+ +DLKKAY+KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGG
Sbjct:    1 MFGRGPSRKSDNTKFYEILGVPKTAAPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGG 87          

HSP 2 Score: 25.7942 bits (55), Expect = 4.340e-40
Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 3
Query:  309 GGAHDPFDIF 338
            GG HDPFDIF
Sbjct:   87 GGGHDPFDIF 96          
BLAST of CF509961 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.644e-32
Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 2
Query:  116 KNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGG 310
            KNAS DDLKKAYRKAAIKNHPDKGGDPEKFKELAQAY+VLSDPEKREIYDQYGEDALKEGMGGGG
Sbjct:    1 KNASPDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYDVLSDPEKREIYDQYGEDALKEGMGGGG 65          

HSP 2 Score: 26.9498 bits (58), Expect = 1.644e-32
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 3
Query:  309 GGAHDPFDIFQ 341
            GG HDPFDIFQ
Sbjct:   65 GGDHDPFDIFQ 75          
BLAST of CF509961 vs. ExPASy Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.228e-22
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGG 304
            YY ILG+ K AS +D+KKAYRK A+K HPDK   P   EKFKE+A+AYEVLSDP+KREIYDQ+GE+ LK G GG
Sbjct:    5 YYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGG 78          
BLAST of CF509961 vs. ExPASy Swiss-Prot
Match: DNJB4_MOUSE (DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.228e-22
Identity = 49/74 (66.22%), Postives = 59/74 (79.73%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGG 304
            YY ILG+ K A+ +D+KKAYRK A+K HPDK   P   EKFKE+A+AYEVLSDP+KREIYDQ+GE+ LK G GG
Sbjct:    5 YYHILGIDKGATDEDVKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGG 78          
BLAST of CF509961 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.228e-22
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGG 304
            YY ILG+ K AS +D+KKAYRK A+K HPDK   P   EKFKE+A+AYEVLSDP+KREIYDQ+GE+ LK G GG
Sbjct:    5 YYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGG 78          
BLAST of CF509961 vs. ExPASy Swiss-Prot
Match: DNJA1_PONAB (DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.506e-22
Identity = 48/77 (62.34%), Postives = 63/77 (81.82%), Query Frame = 2
Query:   86 TKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGW 313
            T YY++LGV  NA+Q++LKKAYRK A+K HPDK   + EKFK+++QAYEVLSD +KRE+YD+ GE A+KEG  GGG+
Sbjct:    5 TTYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYDKGGEQAIKEGGAGGGF 81          
The following BLAST results are available for this feature:
BLAST of CF509961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJH_CUCSA1.426e-4498.84DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH2_ALLPO7.568e-4389.53DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNJH_ATRNU3.705e-4290.70DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ3_ARATH6.809e-4190.80Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNAJ2_ARATH4.340e-4088.51Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJH1_ALLPO1.644e-3296.92DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNJB4_PONAB3.228e-2267.57DnaJ homolog subfamily B member 4 OS=Pongo abelii ... [more]
DNJB4_MOUSE3.228e-2266.22DnaJ homolog subfamily B member 4 OS=Mus musculus ... [more]
DNJB4_HUMAN3.228e-2267.57DnaJ homolog subfamily B member 4 OS=Homo sapiens ... [more]
DNJA1_PONAB5.506e-2262.34DnaJ homolog subfamily A member 1 OS=Pongo abelii ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-475 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509961 ID=CF509961; Name=CF509961; organism=Citrus sinensis; type=EST; length=393bp
GCTCGCCGTCTCGCGTCTACTCTGAAGATCTGAAATTTTTTAGTACAAGA
AGATGTTCGGAAGAGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAG
ATTCTCGGAGTCTCGAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTA
TAGGAAAGCCGCCATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGA
AGTTTAAAGAGTTGGCACAAGCGTATGAGGTTCTGAGTGACCCAGAGAAG
CGTGAAATATATGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGG
TGGTGGTGGGTGGTGCCCATGACCCATTCGACATATTCCAATCCTTCTTC
GGTGGCAGCCCATTTGGTGGTGGGAGCAGCAGAGGAAGAAGGC
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