CF509965

Overview
NameCF509965
Unique NameCF509965
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length420
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1834 contig Csv1_Contig1834:47..466. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF509965 vs. ExPASy Swiss-Prot
Match: APG2_ARATH (GDSL esterase/lipase APG OS=Arabidopsis thaliana GN=APG PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 4.616e-45
Identity = 84/106 (79.25%), Postives = 93/106 (87.74%), Query Frame = 3
Query:   99 APLVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISL 416
            A LVPAI+TFGDS VDVGNNNYL TLF+A+YPPYGRDF NH+ TGRFCNGKLATD TA+TLGF  Y PAYLSP+A+GKNLLIGANFASA SGYDD+ + LNHAI L
Sbjct:   25 AQLVPAIMTFGDSVVDVGNNNYLPTLFRADYPPYGRDFANHKATGRFCNGKLATDITAETLGFTKYPPAYLSPEASGKNLLIGANFASAASGYDDKAALLNHAIPL 130          
BLAST of CF509965 vs. ExPASy Swiss-Prot
Match: GDL78_ARATH (GDSL esterase/lipase At5g22810 OS=Arabidopsis thaliana GN=At5g22810 PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 2.219e-39
Identity = 79/107 (73.83%), Postives = 86/107 (80.37%), Query Frame = 3
Query:   96 AAPLVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISL 416
            A PLVPAI  FGDS VDVGNNN + T+ KAN+PPYGRDF  H PTGRFCNGKLATDFTA+ LGFK+Y  AYLS +A GKNLLIGANFASA SGY D T+ L  AISL
Sbjct:   14 AQPLVPAIFIFGDSVVDVGNNNDIYTIVKANFPPYGRDFTTHTPTGRFCNGKLATDFTAENLGFKSYPQAYLSKKAKGKNLLIGANFASAASGYYDGTAKLYSAISL 120          
BLAST of CF509965 vs. ExPASy Swiss-Prot
Match: GDL73_ARATH (GDSL esterase/lipase At5g03820 OS=Arabidopsis thaliana GN=At5g03820 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 9.647e-35
Identity = 70/105 (66.67%), Postives = 80/105 (76.19%), Query Frame = 3
Query:  102 PLVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISL 416
            PLVPA+I  GDS VD GNNN L TL KAN+PPYGRDF+ H  TGRF NGKLATDFTA++LGF +Y   YLS +A G NLL GANFAS  SGYDD T+   +AI+L
Sbjct:   26 PLVPALIIMGDSVVDAGNNNRLNTLIKANFPPYGRDFLAHNATGRFSNGKLATDFTAESLGFTSYPVPYLSQEANGTNLLTGANFASGASGYDDGTAIFYNAITL 130          
BLAST of CF509965 vs. ExPASy Swiss-Prot
Match: GDL59_ARATH (GDSL esterase/lipase At3g53100 OS=Arabidopsis thaliana GN=At3g53100 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 6.253e-34
Identity = 68/112 (60.71%), Postives = 87/112 (77.68%), Query Frame = 3
Query:   84 YAQDAAPLVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLT 419
            + +    +VPA+I FGDS VDVGNNN L ++ K+N+ PYGRDFI+ +PTGRFCNGKLA DF+A+ LGF +Y PA+LS +A+ +N+LIGANFASA SGY D TS    +ISLT
Sbjct:   19 FCKSKGAVVPALIMFGDSIVDVGNNNNLLSIVKSNFLPYGRDFIDQRPTGRFCNGKLAVDFSAEYLGFSSYPPAFLSREASNENILIGANFASASSGYYDATSVPFGSISLT 130          
BLAST of CF509965 vs. ExPASy Swiss-Prot
Match: GDL72_ARATH (GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana GN=At5g03810 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.053e-33
Identity = 67/105 (63.81%), Postives = 79/105 (75.24%), Query Frame = 3
Query:  105 LVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLT 419
            LVPA+I  GDS VD GNNN+  TL KAN+PPYGRDF+ H  TGRF NGKLATDFTA+ LGF +Y  AYLS +A   NLL GANFAS  SG+DD T+   +AI+L+
Sbjct:   27 LVPALIIMGDSVVDAGNNNHRITLVKANFPPYGRDFVAHSATGRFSNGKLATDFTAENLGFTSYPVAYLSQEANETNLLTGANFASGASGFDDATAIFYNAITLS 131          
BLAST of CF509965 vs. ExPASy Swiss-Prot
Match: GDL34_ARATH (GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana GN=At2g04570 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.926e-28
Identity = 54/95 (56.84%), Postives = 69/95 (72.63%), Query Frame = 3
Query:  108 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTS 392
            +PAII FGDS+VD GNNNY+ T+ ++N+ PYGRDF+  +PTGRFCNGK+ATDF ++ LG K   PAYL P     +   G  FASA +GYD+ TS
Sbjct:   26 IPAIIVFGDSSVDAGNNNYIPTVARSNFEPYGRDFVGGKPTGRFCNGKIATDFMSEALGLKPIIPAYLDPSYNISDFATGVTFASAATGYDNATS 120          
BLAST of CF509965 vs. ExPASy Swiss-Prot
Match: GDL86_ARATH (GDSL esterase/lipase At5g45960 OS=Arabidopsis thaliana GN=At5g45960 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.142e-27
Identity = 57/103 (55.34%), Postives = 68/103 (66.02%), Query Frame = 3
Query:  108 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISL 416
            V AI+ FGDS VD GNNNY+ T+FK N+PPYG DF N  PTGRFCNG+L TDF A  +G K   P YL P      L+ G +FASAGSGYD  T  + + I +
Sbjct:   45 VSAILVFGDSTVDPGNNNYIDTVFKCNFPPYGLDFRNKTPTGRFCNGRLVTDFIASYIGVKENVPPYLDPNLGINELISGVSFASAGSGYDPLTPTITNVIDI 147          
BLAST of CF509965 vs. ExPASy Swiss-Prot
Match: GDL85_ARATH (GDSL esterase/lipase At5g45950 OS=Arabidopsis thaliana GN=At5g45950 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.263e-26
Identity = 55/104 (52.88%), Postives = 75/104 (72.12%), Query Frame = 3
Query:  108 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLT 419
            V +I+ FGDS+VD GNNN++ T  K N+PPYG +FINH+PTGR C+G LA D+ A+ +G+    PA+L P  T  +L  GA+FASAGSGYDD T+ +++  S T
Sbjct:   38 VTSILVFGDSSVDPGNNNFIKTEMKGNFPPYGENFINHKPTGRLCDGLLAPDYIAEAMGYPP-IPAFLDPSLTQADLTRGASFASAGSGYDDLTANISNVWSFT 140          
BLAST of CF509965 vs. ExPASy Swiss-Prot
Match: GDL4_ARATH (GDSL esterase/lipase At1g20120 OS=Arabidopsis thaliana GN=At1g20120 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 1.263e-26
Identity = 56/103 (54.37%), Postives = 71/103 (68.93%), Query Frame = 3
Query:  111 PAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLT 419
            PAI  FGDS +D GNN+Y+ TL KAN+ PYG +F +  PTGRFCNGK+ +DF AD +G K   PAYL P  T ++LL G +FAS GSGYD  T  +  AI ++
Sbjct:   77 PAIFAFGDSILDTGNNDYILTLIKANFLPYGMNFPDKVPTGRFCNGKIPSDFIADYIGVKPVVPAYLRPGLTQEDLLTGVSFASGGSGYDPLTPIVVSAIPMS 179          
BLAST of CF509965 vs. ExPASy Swiss-Prot
Match: GDL47_ARATH (GDSL esterase/lipase At2g40250 OS=Arabidopsis thaliana GN=At2g40250 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.799e-26
Identity = 55/106 (51.89%), Postives = 73/106 (68.87%), Query Frame = 3
Query:   99 APLVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISL 416
            +P + A+  FGDS VD GNNNY+ TLF++N+PPYG+ F +   TGRF +GKLATDF   +LG K   PAYL+P     +LL G +FASAG G DDRT+  +  I++
Sbjct:   31 SPPITALYAFGDSTVDSGNNNYIPTLFQSNHPPYGKSFPSKLSTGRFSDGKLATDFIVSSLGLKPTLPAYLNPSVKPVDLLTGVSFASAGGGLDDRTAKSSLTITM 136          
The following BLAST results are available for this feature:
BLAST of CF509965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
APG2_ARATH4.616e-4579.25GDSL esterase/lipase APG OS=Arabidopsis thaliana G... [more]
GDL78_ARATH2.219e-3973.83GDSL esterase/lipase At5g22810 OS=Arabidopsis thal... [more]
GDL73_ARATH9.647e-3566.67GDSL esterase/lipase At5g03820 OS=Arabidopsis thal... [more]
GDL59_ARATH6.253e-3460.71GDSL esterase/lipase At3g53100 OS=Arabidopsis thal... [more]
GDL72_ARATH4.053e-3363.81GDSL esterase/lipase At5g03810 OS=Arabidopsis thal... [more]
GDL34_ARATH3.926e-2856.84GDSL esterase/lipase At2g04570 OS=Arabidopsis thal... [more]
GDL86_ARATH1.142e-2755.34GDSL esterase/lipase At5g45960 OS=Arabidopsis thal... [more]
GDL85_ARATH1.263e-2652.88GDSL esterase/lipase At5g45950 OS=Arabidopsis thal... [more]
GDL4_ARATH1.263e-2654.37GDSL esterase/lipase At1g20120 OS=Arabidopsis thal... [more]
GDL47_ARATH4.799e-2651.89GDSL esterase/lipase At2g40250 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-479 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_E07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509965 ID=CF509965; Name=CF509965; organism=Citrus sinensis; type=EST; length=420bp
GCTTAATGAAAGTGGATATGTGTTGCGGGAAAACAGTTCTGTTTGTGGTG
CTTGCATTTGCACTTGCACTTGCAAGCAAAGGGTATGCACAAGATGCAGC
ACCACTTGTTCCTGCAATCATAACATTTGGTGATTCTGCTGTAGATGTTG
GAAACAACAACTATCTTGCCACCCTTTTCAAGGCTAATTACCCTCCTTAT
GGAAGGGACTTTATCAATCATCAACCTACTGGAAGATTTTGCAATGGGAA
ATTAGCCACTGACTTCACTGCTGATACCCTAGGCTTTAAGACTTATGCGC
CAGCATATCTCAGCCCACAGGCTACAGGGAAAAACCTCCTTATTGGAGCC
AACTTTGCTTCAGCGGGATCTGGTTATGATGACAGGACATCCTACTTAAA
TCATGCAATTTCATTGACTC
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