CF509967

Overview
NameCF509967
Unique NameCF509967
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length432
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509967 vs. ExPASy Swiss-Prot
Match: STC_RICCO (Sugar carrier protein C OS=Ricinus communis GN=STC PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.351e-37
Identity = 79/115 (68.70%), Postives = 88/115 (76.52%), Query Frame = 1
Query:   49 MPAVGGFDK--GNGKEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSM 387
            MPAVGG     GN K YPGNLT YV VTC+VAAMGGLIFGYDIGISGGVTSM SFLKKFFPSVYRK++A+ES+N YC+YDS+TLTMFT                +TR+FGRKLSM
Sbjct:    1 MPAVGGIPPSGGNRKVYPGNLTLYVTVTCVVAAMGGLIFGYDIGISGGVTSMDSFLKKFFPSVYRKKKADESSNQYCQYDSQTLTMFTSSLYLAALIASLVASTITRKFGRKLSM 115          
BLAST of CF509967 vs. ExPASy Swiss-Prot
Match: STP1_ARATH (Sugar transport protein 1 OS=Arabidopsis thaliana GN=STP1 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 8.758e-37
Identity = 79/114 (69.30%), Postives = 87/114 (76.32%), Query Frame = 1
Query:   49 MPAVGGFDKGNG-KEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSM 387
            MPA GGF  G+G K YPG LTP+VL TC+VAAMGGLIFGYDIGISGGVTSMPSFLK+FFPSVYRKQQ + STN YC+YDS TLTMFT                VTR+FGR+LSM
Sbjct:    1 MPA-GGFVVGDGQKAYPGKLTPFVLFTCVVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQEDASTNQYCQYDSPTLTMFTSSLYLAALISSLVASTVTRKFGRRLSM 113          
BLAST of CF509967 vs. ExPASy Swiss-Prot
Match: STP12_ARATH (Sugar transport protein 12 OS=Arabidopsis thaliana GN=STP12 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.223e-31
Identity = 68/113 (60.18%), Postives = 79/113 (69.91%), Query Frame = 1
Query:   49 MPAVGGFDKGNGKEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSM 387
            MP+VG       KEYPG LT YV VTCIVAAMGGLIFGYDIGISGGVT+M SF +KFFPSVY KQ+ +  +N YC++DS +LT+FT                VTRQFGRK+SM
Sbjct:    1 MPSVGIVIGDGKKEYPGKLTLYVTVTCIVAAMGGLIFGYDIGISGGVTTMDSFQQKFFPSVYEKQKKDHDSNQYCRFDSVSLTLFTSSLYLAALCSSLVASYVTRQFGRKISM 113          
BLAST of CF509967 vs. ExPASy Swiss-Prot
Match: STP11_ARATH (Sugar transport protein 11 OS=Arabidopsis thaliana GN=STP11 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.508e-25
Identity = 56/107 (52.34%), Postives = 69/107 (64.49%), Query Frame = 1
Query:   70 DKGNGKEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNL-YCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSM 387
            + G+G +Y G +T +V++TCIVAAMGGL+FGYDIGISGGV SM  FL KFFP V R+ Q        YCKYD+E LT+FT                +TR FGRK+SM
Sbjct:    9 ESGHGGDYEGRVTAFVMITCIVAAMGGLLFGYDIGISGGVISMEDFLTKFFPDVLRQMQNKRGRETEYCKYDNELLTLFTSSLYLAALFASFLASTITRLFGRKVSM 115          
BLAST of CF509967 vs. ExPASy Swiss-Prot
Match: HEX6_RICCO (Hexose carrier protein HEX6 OS=Ricinus communis GN=HEX6 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.817e-24
Identity = 53/102 (51.96%), Postives = 68/102 (66.67%), Query Frame = 1
Query:   82 GKEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSM 387
            G +Y G +T +V ++C++AAMGG+IFGYDIG+SGGVTSM  FLKKFFP VYRK + +   + YCK+DS+ LT FT                VTR FGRK S+
Sbjct:   11 GGQYNGRMTSFVALSCMMAAMGGVIFGYDIGVSGGVTSMDPFLKKFFPDVYRKMKEDTEISNYCKFDSQLLTSFTSSLYVAGLVASFFASSVTRAFGRKPSI 112          
BLAST of CF509967 vs. ExPASy Swiss-Prot
Match: STP9_ARATH (Sugar transport protein 9 OS=Arabidopsis thaliana GN=STP9 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.110e-23
Identity = 51/104 (49.04%), Postives = 66/104 (63.46%), Query Frame = 1
Query:   76 GNGKEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSM 387
            G G  Y G +T +V++TCIVAAMGGL+FGYD+GISGGVTSM  FL KFFP V ++         YCK+D++ L +FT                VTR++GRK+SM
Sbjct:   12 GGGNSYEGGVTVFVIMTCIVAAMGGLLFGYDLGISGGVTSMEEFLSKFFPEVDKQMHEARRETAYCKFDNQLLQLFTSSLYLAALASSFVASAVTRKYGRKISM 115          
BLAST of CF509967 vs. ExPASy Swiss-Prot
Match: STP13_ARATH (Sugar transport protein 13 OS=Arabidopsis thaliana GN=STP13 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.894e-23
Identity = 54/111 (48.65%), Postives = 71/111 (63.96%), Query Frame = 1
Query:   61 GGF-DKGNGKEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQAN-ESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSM 387
            GGF    NG E+   +TP V+++CI+AA GGL+FGYD+G+SGGVTSMP FL+KFFP VYRK  A  +  + YCKYD++ L +FT                 TR  GR+L+M
Sbjct:    4 GGFATSANGVEFEAKITPIVIISCIMAATGGLMFGYDVGVSGGVTSMPDFLEKFFPVVYRKVVAGADKDSNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRTLGRRLTM 114          
BLAST of CF509967 vs. ExPASy Swiss-Prot
Match: STP10_ARATH (Sugar transport protein 10 OS=Arabidopsis thaliana GN=STP10 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.511e-23
Identity = 50/104 (48.08%), Postives = 67/104 (64.42%), Query Frame = 1
Query:   76 GNGKEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSM 387
            G G+ Y G +T +V++TCIVAAMGGL+FGYD+GISGGVTSM  FL KFFP V  + +  +    YCK+D++ L +FT                +TR+ GRK+SM
Sbjct:   12 GGGRSYEGGVTAFVIMTCIVAAMGGLLFGYDLGISGGVTSMEEFLTKFFPQVESQMKKAKHDTAYCKFDNQMLQLFTSSLYLAALVASFMASVITRKHGRKVSM 115          
BLAST of CF509967 vs. ExPASy Swiss-Prot
Match: STP7_ARATH (Sugar transport protein 7 OS=Arabidopsis thaliana GN=STP7 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.039e-21
Identity = 52/109 (47.71%), Postives = 71/109 (65.14%), Query Frame = 1
Query:   64 GFDKGNGKEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVY-RKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSM 387
            G  K   ++Y G +T YV++ C+VAA+GG IFGYDIGISGGVTSM  FL++FF +VY +K+QA+ES   YCKYD++ L  FT                +TR +GR+ S+
Sbjct:   10 GVAKERAEQYQGKVTSYVIIACLVAAIGGSIFGYDIGISGGVTSMDEFLEEFFHTVYEKKKQAHESN--YCKYDNQGLAAFTSSLYLAGLVSTLVASPITRNYGRRASI 116          
BLAST of CF509967 vs. ExPASy Swiss-Prot
Match: STP4_ARATH (Sugar transport protein 4 OS=Arabidopsis thaliana GN=STP4 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.357e-21
Identity = 51/101 (50.50%), Postives = 64/101 (63.37%), Query Frame = 1
Query:   85 KEYPGNLTPYVLVTCIVAAMGGLIFGYDIGISGGVTSMPSFLKKFFPSVYRKQQANESTNLYCKYDSETLTMFTXXXXXXXXXXXXXXXRVTRQFGRKLSM 387
            + Y   LTP V VTC + A GGLIFGYD+GISGGVTSM  FL++FFP VY+K ++    N YC++DS+ LT+FT                +TR FGRK SM
Sbjct:   13 RNYNYKLTPKVFVTCFIGAFGGLIFGYDLGISGGVTSMEPFLEEFFPYVYKKMKSAHE-NEYCRFDSQLLTLFTSSLYVAALVSSLFASTITRVFGRKWSM 112          
The following BLAST results are available for this feature:
BLAST of CF509967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
STC_RICCO1.351e-3768.70Sugar carrier protein C OS=Ricinus communis GN=STC... [more]
STP1_ARATH8.758e-3769.30Sugar transport protein 1 OS=Arabidopsis thaliana ... [more]
STP12_ARATH3.223e-3160.18Sugar transport protein 12 OS=Arabidopsis thaliana... [more]
STP11_ARATH4.508e-2552.34Sugar transport protein 11 OS=Arabidopsis thaliana... [more]
HEX6_RICCO3.817e-2451.96Hexose carrier protein HEX6 OS=Ricinus communis GN... [more]
STP9_ARATH1.110e-2349.04Sugar transport protein 9 OS=Arabidopsis thaliana ... [more]
STP13_ARATH1.894e-2348.65Sugar transport protein 13 OS=Arabidopsis thaliana... [more]
STP10_ARATH5.511e-2348.08Sugar transport protein 10 OS=Arabidopsis thaliana... [more]
STP7_ARATH1.039e-2147.71Sugar transport protein 7 OS=Arabidopsis thaliana ... [more]
STP4_ARATH1.357e-2150.50Sugar transport protein 4 OS=Arabidopsis thaliana ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-481 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509967 ID=CF509967; Name=CF509967; organism=Citrus sinensis; type=EST; length=432bp
TTTCTTTATCTTCTTAGAATCAAGAAAAAAAAGGAAAAGGCTGAAAAAAT
GCCTGCTGTTGGAGGATTTGATAAGGGTAACGGGAAAGAGTACCCCGGAA
ACCTCACCCCATACGTGTTAGTAACATGTATTGTTGCTGCCATGGGTGGC
CTCATCTTTGGTTATGATATTGGGATTTCAGGTGGTGTGACCTCAATGCC
TTCATTTTTGAAGAAGTTTTTCCCGTCGGTGTACAGGAAGCAACAGGCGA
ACGAGTCAACGAATCTGTACTGTAAGTATGACAGTGAGACGTTGACTATG
TTCACGTCGTCGCTTTACTTGGCTGCTCTATTATCATCACTGGTGGCGTC
AAGGGTGACGAGACAATTCGGAAGAAAACTGTCTATGTTTTTCGGCGGTA
TCCTGTTTCTTGCCGGTGCCTTGCTCAATGGC
back to top