CF509975
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509975 vs. ExPASy Swiss-Prot
Match: IMB1_MOUSE (Importin subunit beta-1 OS=Mus musculus GN=Kpnb1 PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.327e-38 Identity = 82/165 (49.70%), Postives = 106/165 (64.24%), Query Frame = 1 Query: 13 GQDFLKYMPEFYKYVEMGLQNFEDYQVCAITVGVVGDLCRALEDKILPYCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAAELSVHTSGVDDDMTEYTNSLRNGILEAFSGIFQGFKGS-----PKTQLLMPYAPHILQFLD 492 G +FLKYM F ++ +GL+N+ +YQVC VG+VGDLCRAL+ ILP+CD +M LL++L + +HRSVKP I S FGDIALAIG F+KYL + LQ A++ V S D DM +Y N LR LEA++GI QG KG P L+ P IL F+D Sbjct: 640 GGEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNILPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKS--DFDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFID 802
BLAST of CF509975 vs. ExPASy Swiss-Prot
Match: IMB1_HUMAN (Importin subunit beta-1 OS=Homo sapiens GN=KPNB1 PE=1 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 2.264e-38 Identity = 81/165 (49.09%), Postives = 106/165 (64.24%), Query Frame = 1 Query: 13 GQDFLKYMPEFYKYVEMGLQNFEDYQVCAITVGVVGDLCRALEDKILPYCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAAELSVHTSGVDDDMTEYTNSLRNGILEAFSGIFQGFKGS-----PKTQLLMPYAPHILQFLD 492 G +FLKYM F ++ +GL+N+ +YQVC VG+VGDLCRAL+ I+P+CD +M LL++L + +HRSVKP I S FGDIALAIG F+KYL + LQ A++ V S D DM +Y N LR LEA++GI QG KG P L+ P IL F+D Sbjct: 640 GGEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKS--DYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFID 802
BLAST of CF509975 vs. ExPASy Swiss-Prot
Match: IMB1_RAT (Importin subunit beta-1 OS=Rattus norvegicus GN=Kpnb1 PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 4.270e-37 Identity = 80/165 (48.48%), Postives = 104/165 (63.03%), Query Frame = 1 Query: 13 GQDFLKYMPEFYKYVEMGLQNFEDYQVCAITVGVVGDLCRALEDKILPYCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAAELSVHTSGVDDDMTEYTNSLRNGILEAFSGIFQGFKGS-----PKTQLLMPYAPHILQFLD 492 G +FLKYM F ++ +GL+N+ + QVC VG+VGDLCRAL+ ILP+CD +M LL++L + +HRSVKP I S FGDI LAIG F+KYL + LQ A++ V S D DM +Y N LR LEA++GI QG KG P L+ P IL F+D Sbjct: 639 GGEFLKYMEAFKPFLGIGLKNYAECQVCLAAVGLVGDLCRALQSNILPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDITLAIGGEFKKYLEVVLNTLQQASQAQVDKS--DFDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFID 801
BLAST of CF509975 vs. ExPASy Swiss-Prot
Match: IMB_DROME (Importin subunit beta OS=Drosophila melanogaster GN=Fs(2)Ket PE=1 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 6.817e-35 Identity = 75/164 (45.73%), Postives = 105/164 (64.02%), Query Frame = 1 Query: 13 GQDFLKYMPEFYKYVEMGLQNFEDYQVCAITVGVVGDLCRALEDKILPYCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAAELSVHTSGVDDDMTEYTNSLRNGILEAFSGIFQGFKGSPKT-----QLLMPYAPHILQFL 489 G F KYMP F ++ MGL+NF++YQVC VG+ GD+ RAL+D ++PY + IMT L+ +L+ +HR+VKP + S FGDIAL+IG +F YL + ML+ A+ L T + DM EY N LR ILEA++GI QG KG +T + P+ HI+ F+ Sbjct: 646 GAQFAKYMPAFKDFLVMGLKNFQEYQVCCAAVGLTGDIFRALKDLMVPYSNEIMTVLINNLTEPTIHRTVKPQVLSAFGDIALSIGNHFLPYLSMVLDMLRVASNL--QTDANNFDMNEYINELRESILEAYTGIIQGLKGVDQTAHTDVMHMEPHLMHIISFI 807
BLAST of CF509975 vs. ExPASy Swiss-Prot
Match: IMB1_SCHPO (Importin subunit beta-1 OS=Schizosaccharomyces pombe GN=kap95 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 8.333e-33 Identity = 70/159 (44.03%), Postives = 100/159 (62.89%), Query Frame = 1 Query: 16 QDFLKYMPEFYKYVEMGLQNFEDYQVCAITVGVVGDLCRALEDKILPYCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAAELSVHTSGVDDDMTEYTNSLRNGILEAFSGIFQGFKGSPKTQLLMPYAPHILQFLD 492 + F Y+P F ++ L N ++YQ+C++ VG+VGDL RAL KILPYCD MT+L++DL S+ L R+VKP I SCF DIALAIG F+ YL M +LQ A+ + G + M +Y ++LR GI+EA+ GI Q + + L+ PY + L+ Sbjct: 632 EQFEVYVPSFVPFLSSALSNEQEYQLCSVAVGLVGDLARALNAKILPYCDDFMTRLVQDLQSSVLDRNVKPAILSCFSDIALAIGAAFQTYLEAVMVLLQQASSVQA-PPGANFSMIDYVDALRLGIVEAYVGITQAVRTDNRLDLIQPYVHSMFTLLN 789
BLAST of CF509975 vs. ExPASy Swiss-Prot
Match: IMB1_YEAST (Importin subunit beta-1 OS=Saccharomyces cerevisiae GN=KAP95 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.521e-13 Identity = 50/163 (30.67%), Postives = 76/163 (46.63%), Query Frame = 1 Query: 1 AYATGQDFLKYMPEFYKYVEMGLQNFEDYQVCAITVGVVGDLCRALEDKILPYCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAAELSVHTSGVDDDMTEYTNSLRNGILEAFSGIFQGFKGSPKTQLLMPYAPHILQFL 489 A + G+ F KY+ F Y+ L N D V VG + D+ +LE+ Y D +M L + +S+ R +KP + S FGDIA IG +F YL M + +A + + +Y + +L+A+ GI G P + L PY I QF+ Sbjct: 626 AASLGKGFEKYLETFSPYLLKAL-NQVDSPVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMALCVAAQNTKPENGTL--EALDYQIKVLEAVLDAYVGIVAGLHDKP--EALFPYVGTIFQFI 783 The following BLAST results are available for this feature:
BLAST of CF509975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509975 ID=CF509975; Name=CF509975; organism=Citrus sinensis; type=EST; length=493bpback to top |