CF509979
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509979 vs. ExPASy Swiss-Prot
Match: DYR_SCHPO (Dihydrofolate reductase OS=Schizosaccharomyces pombe GN=dfr1 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.240e-16 Identity = 57/204 (27.94%), Postives = 89/204 (43.63%), Query Frame = 2 Query: 59 LKLLCLHGFRTSGKFLQKQLSKWDPSIFAHFDMDFPDGIFPAGGKSD------------IEGIFPPPYFEWFQFNKEFTEYTNLEECVSYLTEYITSNGPFDGLLGFSQGATLSALLLGYQAQGK---VLKEHPPMKLFVSISGSKFRDPSICEVAYKDTINVKSAHFIGAKDWL--RLPSEELATAFHKPLIIRHPQGHTVPR 619 LK+LCLHG+ SG K++ + + ++ FP G A ++D + G F WF+ Y + +E + + +Y+ GPFDGL+GFSQGA + A+L G+ +HPP K V + G + P + Y + S H G D L S++L ++ HP H VP+ Sbjct: 5 LKVLCLHGWIQSGPVFSKKMGSVQKYLSKYAELHFPTGPVVADEEADPNDEEEKKRLAALGGEQNGGKFGWFEVEDFKNTYGSWDESLECINQYMQEKGPFDGLIGFSQGAGIGAMLAQMLQPGQPPNPYVQHPPFKFVVFVGGFRAEKPEF-DHFYNPKLTTPSLHIAGTSDTLVPLARSKQLVERCENAHVLLHPGQHIVPQ 207
BLAST of CF509979 vs. ExPASy Swiss-Prot
Match: U483_CAEBR (UPF0483 protein CBG03338 OS=Caenorhabditis briggsae GN=CBG03338 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 63/211 (29.86%), Postives = 101/211 (47.87%), Query Frame = 2 Query: 56 KLKLLCLHGFRTSGKFLQKQLSKWDPSIFAHFDMDFPDGIFPAGGKSDIEGIFPPPYFEWFQFNKEFTEYTNL----EECVSYLTEYITSNGPFDGLLGFSQGATLSALLLGYQAQGKVLKEHPPMKLFVSISG---SKFRDPSICEVAYKDTINVKSAHFIGAKDWL--RLPSEELATAFH-KPLIIRHPQGHTVPRLD---EAATELLR 649 KL++LCLHG+R + +++ + A D +F +GI E + Q + E T++ +E V+ + ++I NGPFDGLLGFSQGA++ LL+ G++ + P ++ + SG + ++ + KD S H G D + R SE+LA F +P+ I H GH VP + E T+ LR Sbjct: 6 KLRILCLHGYRQCDQSFRQKTGSTRKLVKALADFEFVNGIHSVAVDEHSETSRAWWFSNADQMSFSSREPTDVSVGFDESVNAVVKFIEDNGPFDGLLGFSQGASMVHLLIAKAQLGEI--KLPGIRFAIFFSGFLSLSSKHDTLTSLRIKD---FPSMHVFGDSDEIVARPKSEKLADQFDMEPIRIAHEGGHLVPSMSKHKERITQFLR 211
BLAST of CF509979 vs. ExPASy Swiss-Prot
Match: U483_CAEEL (UPF0483 protein C25G4.2 OS=Caenorhabditis elegans GN=C25G4.2 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.208e-12 Identity = 57/202 (28.22%), Postives = 93/202 (46.04%), Query Frame = 2 Query: 56 KLKLLCLHGFRTSGKFLQKQLSKWDPSIFAHFDMDFPDGIFPAGGKSDIEGIFPPPYFEWFQFN-------KEFTEYT-NLEECVSYLTEYITSNGPFDGLLGFSQGATLSALLLGYQAQGKVLKEHPPMKLFVSISGSKFRDPSICEVAYKDTINVKSAHFIGAKDWL--RLPSEELATAFH-KPLIIRHPQGHTVPRLDE 628 KL++LCLHG+R + +++ + + + +F +G+ ++ WF N +E TE EE V+ + ++I NGPFDGLLGFSQGA++ LL+ G++ + P ++ + SG + S H G D + R SE++A F +PL I H GH VP + + Sbjct: 6 KLRILCLHGYRQCDQSFRQKTGSTRKLVKSLAEFEFVNGVHSVAVDEHVDS----SRAWWFSNNEAMSFSSRESTEVAVGFEESVAAVVKFIEENGPFDGLLGFSQGASMVHLLIAKAQLGEI--KLPGIRFAIFFSGFLSLSSKHDSLTLLRIKEFPSMHVFGDADEIVARPKSEKMADMFDVEPLRIAHDGGHVVPSMSK 201
BLAST of CF509979 vs. ExPASy Swiss-Prot
Match: FSH3_YEAST (Family of serine hydrolases 3 OS=Saccharomyces cerevisiae GN=FSH3 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.629e-11 Identity = 64/212 (30.19%), Postives = 89/212 (41.98%), Query Frame = 2 Query: 56 KLKLLCLHGFRTSGKF-------LQKQLSKWDPSIF-----------AHFDMDFPDGIFPAGGKSDIEGIFPPPYFEWFQFNKE-FTEYTNLEECVSYLTEYITSNGPFDGLLGFSQGATLSALLLG--YQAQGKVLKEHPPMKLFVSISGSKFRDPSICEVAYKDTINVKSAHFIGAKDWLRLPSEELAT----AFHKPLIIRHPQGHTVP 616 K K+L LHGF S K L+K L K ++ A F + G A K + WF N E F + ++ +YL Y+ NGPFDG++GFSQGA L L+ + ++ P +K F+S SG K D S + Y I V S H G D + S +A +K ++ HP H VP Sbjct: 4 KKKVLMLHGFVQSDKIFSAKTGGLRKNLKKLGYDLYYPCAPHSIDKKALFQSESEKGRDAA--KEFNTSATSDEVYGWFFRNPESFNSFQIDQKVFNYLRNYVLENGPFDGVIGFSQGAGLGGYLVTDFNRILNLTDEQQPALKFFISFSGFKLEDQSY-QKEYHRIIQVPSLHVRGELDEVVAESRIMALYESWPDNKRTLLVHPGAHFVP 212
BLAST of CF509979 vs. ExPASy Swiss-Prot
Match: OVCA2_HUMAN (Ovarian cancer-associated gene 2 protein OS=Homo sapiens GN=OVCA2 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11 Identity = 60/207 (28.99%), Postives = 92/207 (44.44%), Query Frame = 2 Query: 59 LKLLCLHGFRTSGKFLQKQLSKWDPSIFAHFDM-------DFPDGIFPAGGKSDIEGIFPP---PYFEWFQFNK--------EFTEYTNLEECVSYLTEYITSNGPFDGLLGFSQGATLSALLLGYQAQGKVLKEHPPMKLFVSISGSKFRDPSICEVAYKDTINVKSAHFIGAKDWLRLPSEE---LATAFHKPLIIRHPQGHTVP 616 L++LCL GFR S + +++ ++ ++ PD P G +SD G PP P WF + E LEE + + + + GPFDGLLGFSQGA L+AL+ G P + + +SG R E + +++ S H G D + +PS+E LA+ F + + H GH +P Sbjct: 7 LRVLCLAGFRQSERGFREKTGALRKALRGRAELVCLSGPHPVPDPPGPEGARSDF-GSCPPEEQPRGWWFSEQEADVFSALEEPAVCRGLEESLGMVAQALNRLGPFDGLLGFSQGAALAALVCALGQAGD--PRFPLPRFILLVSGFCPRGIGFKESILQRPLSLPSLHVFGDTDKV-IPSQESVQLASQFPGAITLTHSGGHFIP 209 The following BLAST results are available for this feature:
BLAST of CF509979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509979 ID=CF509979; Name=CF509979; organism=Citrus sinensis; type=EST; length=710bpback to top |