CF509982
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF509982 vs. ExPASy Swiss-Prot
Match: FBW2_ARATH (F-box protein FBW2 OS=Arabidopsis thaliana GN=FBW2 PE=1 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.291e-62 Identity = 127/222 (57.21%), Postives = 154/222 (69.37%), Query Frame = 1 Query: 46 AGSLQTLRLPRSEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPNLKVLGPFVMDYYEM-NDWDD-CSDY-SDGSEYLAWEFLAXXXXXXXXXXXXXXXXWDAEGRLEELELRFYDGIEEDAGIYGWPPSP 702 AGSL+TL++PRS +++S V +A +LS++TFLDLSYC KIG A++AIGKHCK L CRNMHPLD A +S DDEA AIA+TMPKLKRLE+AYH +STE VLKILS C LEFL+LRGCWDV+LD+KF K FP++KVLGP V+ +Y+M NDW+D CSDY SDGS+YLAWEF WD E L D + WPPSP Sbjct: 105 AGSLKTLKVPRSGLTNSGVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAYAIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPDMKVLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFF-EDGVMGEFYEDEFEHGWDDNFYAENAVL--------DMEPHIWPPSP 317
BLAST of CF509982 vs. ExPASy Swiss-Prot
Match: SKI19_ARATH (F-box protein SKIP19 OS=Arabidopsis thaliana GN=SKIP19 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.571e-12 Identity = 50/141 (35.46%), Postives = 80/141 (56.74%), Query Frame = 1 Query: 46 AGSLQTLRLPR-SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPNLKVL 465 + +L++LRL R S+++D + +L + L+LSYCS +L +G+ C + L N HP + DD+A AIA TMPKL+ L++ + +S + IL +C+ LE LDLR C++V L K F ++KV+ Sbjct: 114 SSNLRSLRLIRCSQITDDGFVEAVVKLP-LEELELSYCS-FSVESLRVVGQCCLNMKTLKLNKHP-----QKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFESVKVV 247
BLAST of CF509982 vs. ExPASy Swiss-Prot
Match: FBL23_ARATH (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana GN=FBL23 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.737e-11 Identity = 54/165 (32.73%), Postives = 84/165 (50.91%), Query Frame = 1 Query: 46 AGSLQTLRLPRS-EMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPNLKVLGPFVMDYYEMNDWDDCSDYSDGSE 537 + +L++L L R ++D VA+ ++ + +L++SYC G +L IG+ C L L N P DD A AIA +MP+L+ L++ + ++ + + IL C LE LDLR C+++ L K F +K D ND DD SD DGS+ Sbjct: 276 SSNLKSLGLVRCFPITDEGVAKAVSKVPLLEYLEVSYCLFSGE-SLRDIGRSCPNLKTLKLNRAPEIMFSNSGFDDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRCFERIK-------DLRCPNDSDDDSD--DGSD 430
BLAST of CF509982 vs. ExPASy Swiss-Prot
Match: SKIP1_ARATH (F-box protein SKIP1 OS=Arabidopsis thaliana GN=SKIP1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.054e-11 Identity = 53/165 (32.12%), Postives = 81/165 (49.09%), Query Frame = 1 Query: 10 CADVDLFPGSASAGSLQTLRLPRS-EMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMH----------PLDTADKLSQDD--EANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPNLKVL 465 C+D L + +LQ L + S ++D+ + +IA R ++ LD+SYC +I L IG++C L +L RN+ P + D QD EA+AI M L+ LE+ + +S + + I C LE+LDL GC V L + + N LK L Sbjct: 99 CSDHALSYAADRCPNLQVLAIRSSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDWSSRHIGSVPTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFGC--VHLSSRDITSNVSRLKWL 261 The following BLAST results are available for this feature:
BLAST of CF509982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509982 ID=CF509982; Name=CF509982; organism=Citrus sinensis; type=EST; length=711bpback to top |