CF509998
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF509998 vs. ExPASy Swiss-Prot
Match: MEP1_SOYBN (Metalloendoproteinase 1 OS=Glycine max PE=1 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 6.895e-44 Identity = 89/166 (53.61%), Postives = 105/166 (63.25%), Query Frame = 1 Query: 4 MPRWPSNKRDLTYAFLPDNQLTDEVKNVFATAFDRWSEATSLTFTRTDVYTTADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPPNGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSISSGSRKVELANDDIQGIQALYGNNP 501 MPRW + LTYAF P+ +L D K+ A AF +W+ ++ F T Y TA+I+I F + +HGD PFDGP G L HAF+P +GR H D DE WV DLESVAVHEIGHLLGLGHSS AIMYPSI +RKV LA DDI GI+ LYG NP Sbjct: 140 MPRWQAGTTQLTYAFSPEPRLDDTFKSAIARAFSKWTPVVNIAFQETTSYETANIKILFASKNHGDPYPFDGPGGILGHAFAPTDGRCHFDADEYWVASGDVTKSPVTSAFDLESVAVHEIGHLLGLGHSSDLRAIMYPSIPPRTRKVNLAQDDIDGIRKLYGINP 305
BLAST of CF509998 vs. ExPASy Swiss-Prot
Match: MMP1_HUMAN (Interstitial collagenase OS=Homo sapiens GN=MMP1 PE=1 SV=3) HSP 1 Score: 121.709 bits (304), Expect = 2.632e-27 Identity = 78/174 (44.83%), Postives = 90/174 (51.72%), Query Frame = 1 Query: 1 GMPRWPSNKRDLTYA---FLPDNQLTDEVKNVFATAFDRWSEATSLTFTRTDVYTTADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPP---NGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSISSGSRKVELANDDIQGIQALYGNNPN 504 G PRW + LTY + PD D V + AF WS T LTFT+ ADI I F GDH D PFDGP G LAHAF P G H D DE W +L VA HE+GH LGL HS+ A+MYPS + S V+LA DDI GIQA+YG + N Sbjct: 105 GNPRW--EQTHLTYRIENYTPDLPRAD-VDHAIEKAFQLWSNVTPLTFTKVSE-GQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWT--------NNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF-SGDVQLAQDDIDGIQAIYGRSQN 265
BLAST of CF509998 vs. ExPASy Swiss-Prot
Match: MMP1_RABIT (Interstitial collagenase OS=Oryctolagus cuniculus GN=MMP1 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.000e-26 Identity = 77/174 (44.25%), Postives = 89/174 (51.15%), Query Frame = 1 Query: 1 GMPRWPSNKRDLTYA---FLPDNQLTDEVKNVFATAFDRWSEATSLTFTRTDVYTTADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPP---NGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSISSGSRKVELANDDIQGIQALYGNNPN 504 G PRW + LTY + PD D V N AF WS T LTFT+ ADI I F GDH D PFDGP G LAHAF P G H D D+ W +L VA HE+GH LGL HS+ A+MYP+ S V+LA DDI GIQA+YG + N Sbjct: 104 GNPRW--EQTHLTYRIENYTPDLSRAD-VDNAIEKAFQLWSNVTPLTFTKVSK-GQADIMISFVRGDHRDNSPFDGPEGQLAHAFQPGLGIGGDVHFDEDDRWT--------KDFRNYNLYRVAAHELGHSLGLSHSTDIGALMYPNYMF-SGDVQLAQDDIDGIQAIYGPSQN 264
BLAST of CF509998 vs. ExPASy Swiss-Prot
Match: HE_PARLI (Hatching enzyme OS=Paracentrotus lividus PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.000e-26 Identity = 72/179 (40.22%), Postives = 93/179 (51.96%), Query Frame = 1 Query: 19 SNKRDLTYAF--LPDNQLTDEVKNVFATAFDRWSEATSLTFTRTDVYTTADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPPNGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSISSGSRKVELANDDIQGIQALYGNNPNFNGSSAPTDQQRDTS 549 S + +TY+F L + ++VK+ AF W + + L+F T+ DIRI F + DHGDG FDG G LAHAF P NG H D E W +L VA HE GH LGL HS+V A+MYP L NDDI GI++LYG+N +GS T +R T+ Sbjct: 175 SRNQPVTYSFGALTSDLNQNDVKDEIRRAFRVWDDVSGLSFREVPDTTSVDIRIKFGSYDHGDGISFDGRGGVLAHAFLPRNGDAHFDDSETWT-------EGTRSGTNLFQVAAHEFGHSLGLYHSTVRSALMYPYYQGYVPNFRLDNDDIAGIRSLYGSN---SGSGTTTTTRRPTT 343
BLAST of CF509998 vs. ExPASy Swiss-Prot
Match: MMP20_PIG (Matrix metalloproteinase-20 OS=Sus scrofa GN=MMP20 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.801e-26 Identity = 70/175 (40.00%), Postives = 83/175 (47.43%), Query Frame = 1 Query: 1 GMPRWPSNKRDLTYAFLPDNQLTDEVKNVFATAFDRWSEATSLTFTRTDVYTTADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPP---NGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSIS-SGSRKVELANDDIQGIQALYGNNPNFNG 513 G P+W N + + EV A WS A L+F R + ADI I F TGDHGD PFDGP GTLAHAF+P G H D E W +L +VA HE GH LGL HS+ A+MYP+ L DD++GIQALYG F G Sbjct: 113 GEPKWKKNTLTYRISKYTPSMTPAEVDKAMEMALQAWSSAVPLSFVRVNA-GEADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWT--------MGMNGFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQNPYGFHLPKDDVKGIQALYGPRKTFTG 278
BLAST of CF509998 vs. ExPASy Swiss-Prot
Match: MMP18_XENLA (Matrix metalloproteinase-18 OS=Xenopus laevis GN=mmp18 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.964e-26 Identity = 77/180 (42.78%), Postives = 92/180 (51.11%), Query Frame = 1 Query: 25 KRDLTYA---FLPDNQLTDEVKNVFATAFDRWSEATSLTFTRTDVYT-TADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPPN---GRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSISSGSRKV-ELANDDIQGIQALYGNNPNFNGSSAPTDQQR 540 K+DLTY F PD D V+ AF WS+ T LTFTR +Y +DI I F GDH D PFDG G LAHAF P N G H D DE W +L VA HE GH LGL HS+ + A+MYP+ S+ K +L DDI IQ LYG + N + P+ R Sbjct: 111 KKDLTYRILNFTPDLPQAD-VETAIQRAFKVWSDVTPLTFTR--IYNEVSDIEISFTAGDHKDNSPFDGSGGILAHAFQPGNGIGGDAHFDEDETWT--------KTSEIYNLFLVAAHEFGHSLGLSHSTDQGALMYPTYSNTDPKTFQLPQDDINAIQYLYGKSSNPVQPTGPSTPSR 279
BLAST of CF509998 vs. ExPASy Swiss-Prot
Match: MMP20_MOUSE (Matrix metalloproteinase-20 OS=Mus musculus GN=Mmp20 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.467e-26 Identity = 71/175 (40.57%), Postives = 84/175 (48.00%), Query Frame = 1 Query: 1 GMPRWPSNKRDLTYAFLPDNQLTDEVKNVFATAFDRWSEATSLTFTRTDVYTTADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPP---NGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSIS-SGSRKVELANDDIQGIQALYGNNPNFNG 513 G P+W N + + EV A WS A L F R + ADI I F TGDHGD PFDGP GTLAHAF+P G H D E W +L +VA HE GH LGLGHS+ A+MYP+ + L DD++GIQALYG F G Sbjct: 112 GEPKWKKNILTYRISKYTPSMSPTEVDKAIQMALHAWSTAVPLNFVRINS-GEADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWT--------MGTNGFNLFTVAAHEFGHALGLGHSTDPSALMYPTYKYQNPYRFHLPKDDVKGIQALYGPRKIFPG 277
BLAST of CF509998 vs. ExPASy Swiss-Prot
Match: HE_HEMPU (50 kDa hatching enzyme OS=Hemicentrotus pulcherrimus PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.467e-26 Identity = 71/177 (40.11%), Postives = 90/177 (50.85%), Query Frame = 1 Query: 13 WPSNKRDLTYAF--LPDNQLTDEVKNVFATAFDRWSEATSLTFTRTDVYTTADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPPNGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPSISSGSRKVELANDDIQGIQALYGNNPNFNGSSAPTDQQ 537 WP N +TY+F L ++ +KN AF W + +SLTF ++ DIRI F + +HGDG FDG G LAHAF P NG H D E W +L VA HE GH LGL HS V+ A+MYP + L DDI GI +LYG N GS+ T ++ Sbjct: 177 WPRNVA-VTYSFGTLSNDLSQTAIKNELRRAFQVWDDVSSLTFREVVDSSSVDIRIKFGSYEHGDGISFDGQGGVLAHAFLPRNGDAHFDDSERWT-------IGTNSGTNLFQVAAHEFGHSLGLYHSDVQSALMYPYYRGYNPNFNLDRDDIAGITSLYGRN---TGSTTTTTRR 342
BLAST of CF509998 vs. ExPASy Swiss-Prot
Match: MMP1_PIG (Interstitial collagenase OS=Sus scrofa GN=MMP1 PE=1 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 1.444e-25 Identity = 79/186 (42.47%), Postives = 93/186 (50.00%), Query Frame = 1 Query: 1 GMPRWPSNKRDLTYA---FLPDNQLTDEVKNVFATAFDRWSEATSLTFTRTDVYTTADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPP---NGRFHLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYPS-ISSGSRKVELANDDIQGIQALYGNNPNFNGSSAPTDQQ 537 G PRW + LTY + PD D V AF WS + LTFT+ ADI I F GDH D PFDGP G LAHAF P G H D DE W +L VA HE+GH LGL HS+ A+MYP+ I +G V+L+ DDI GIQA+YG + N S P Q Sbjct: 105 GNPRWENTH--LTYRIENYTPDLSRED-VDRAIEKAFQLWSNVSPLTFTKVSE-GQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWT--------KNFRDYNLYRVAAHELGHSLGLSHSTDIGALMYPNYIYTGD--VQLSQDDIDGIQAIYGPSENPVQPSGPQTPQ 276
BLAST of CF509998 vs. ExPASy Swiss-Prot
Match: MMP3_CANFA (Stromelysin-1 OS=Canis familiaris GN=MMP3 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.886e-25 Identity = 75/187 (40.11%), Postives = 96/187 (51.34%), Query Frame = 1 Query: 1 GMPRWPSNKRDLTYAFL---PDNQLTDEVKNVFATAFDRWSEATSLTFTRTDVYTTADIRIGFFTGDHGDGEPFDGPMGTLAHAFSPPNGRF---HLDGDENWVXXXXXXXXXXXXXXDLESVAVHEIGHLLGLGHSSVEDAIMYP--SISSGSRKVELANDDIQGIQALYGNNP--NFNGSSAPTD 531 GMP+W K LTY + PD D V + A + W E T LTF+RTD ADI+I F DHGD PFDGP L HA+ P G + H D DE W +L VA HE+GH LGL HS+ A+MYP ++ + + L+ DD+ GIQ+LYG P + N PT+ Sbjct: 105 GMPKW--RKTHLTYRIMNYTPDLP-RDAVDSAIEKALNVWKEVTPLTFSRTDE-GEADIKISFAVRDHGDFNPFDGPGNVLGHAYPPGPGIYGDAHFDDDEQWT--------SDTSGTNLFLVAAHELGHSLGLFHSADPSALMYPVYNVLADLARFHLSQDDVNGIQSLYGGPPSDSSNDPVVPTE 279 The following BLAST results are available for this feature:
BLAST of CF509998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509998 ID=CF509998; Name=CF509998; organism=Citrus sinensis; type=EST; length=582bpback to top |