CF510001

Overview
NameCF510001
Unique NameCF510001
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 2.417e-57
Identity = 108/141 (76.60%), Postives = 121/141 (85.82%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVKRLYDNN++R EQF NEVEILT LRH NLV+LFGC+S+ S+ LLLVYE+VANGT+AD LHG +A    L W IR+ IA+ETASAL YLHAS IIHRDVK+NNILLD NF VKVADFGLSRLFP+D THVSTAPQGTPGY
Sbjct:  370 AVKRLYDNNFKRAEQFRNEVEILTGLRHPNLVALFGCSSKQSRDLLLVYEYVANGTLADHLHGPQANPSSLPWSIRLKIAVETASALKYLHASKIIHRDVKSNNILLDQNFNVKVADFGLSRLFPMDKTHVSTAPQGTPGY 510          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 1.023e-31
Identity = 74/144 (51.39%), Postives = 94/144 (65.28%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            A+K+    +  +VEQF+NEV +L+++ H+N+V L GC    ++  LLVYEF+ NGT+ D LHG      L TW  R+ IAIE A  LAYLH+S    IIHRD+KT NILLD N   KVADFG SRL P+D   + T  QGT GY
Sbjct:  435 AIKKARLGDSSQVEQFINEVLVLSQINHRNVVKLLGCCLE-TEVPLLVYEFITNGTLFDHLHGSMIDSSL-TWEHRLKIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDVNLTAKVADFGASRLIPMDKEELETMVQGTLGY 576          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 2.278e-31
Identity = 70/144 (48.61%), Postives = 97/144 (67.36%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            A+KRL   +   ++Q MNE+++L+ + H NLV L GC       +L VYE++ NGT+++ L  DR     L W +R+ +A +TA A+AYLH+S    I HRD+K+ NILLD +F  KVADFGLSRL   + +H+STAPQGTPGY
Sbjct:  374 AIKRLRHRDSESLDQVMNEIKLLSSVSHPNLVRLLGCCIEQGDPVL-VYEYMPNGTLSEHLQRDRGSG--LPWTLRLTVATQTAKAIAYLHSSMNPPIYHRDIKSTNILLDYDFNSKVADFGLSRLGMTESSHISTAPQGTPGY 514          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 6.629e-31
Identity = 73/144 (50.69%), Postives = 95/144 (65.97%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            A+K+    +  +VEQF+NEV +L+++ H+N+V L GC    ++  LLVYEF+++GT+ D LHG      L TW  R+ IAIE A  LAYLH+     IIHRDVKT NILLD N   KVADFG SRL P+D   ++T  QGT GY
Sbjct:  434 AIKKARLGDRSQVEQFINEVLVLSQINHRNVVKLLGCCLE-TEVPLLVYEFISSGTLFDHLHGSMFDSSL-TWEHRLRIAIEVAGTLAYLHSYASIPIIHRDVKTANILLDENLTAKVADFGASRLIPMDQEQLTTMVQGTLGY 575          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 6.629e-31
Identity = 73/141 (51.77%), Postives = 96/141 (68.09%), Query Frame = 3
Query:   12 RLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            RL DN+  +VEQF+NEV +L+++ H+N+V L GC    ++  LLVYEF+++GT+ D LHG      L TW  R+ +A+E A  LAYLH+S    IIHRD+KT NILLD N   KVADFG SRL P+D   ++T  QGT GY
Sbjct:  441 RLGDNS--QVEQFINEVLVLSQINHRNVVKLLGCCLE-TEVPLLVYEFISSGTLFDHLHGSMFDSSL-TWEHRLRMAVEIAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASRLIPMDKEDLATMVQGTLGY 577          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 8.657e-31
Identity = 72/144 (50.00%), Postives = 95/144 (65.97%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            A+K+    N  +VEQF+NEV +L+++ H+N+V + GC    ++  LLVYEF+ +GT+ D LHG      L TW  R+ IA E A +LAYLH+S    IIHRD+KT NILLD N   KVADFG SRL P+D   ++T  QGT GY
Sbjct:  430 AIKKARLGNRSQVEQFINEVLVLSQINHRNVVKVLGCCLE-TEVPLLVYEFINSGTLFDHLHGSLYDSSL-TWEHRLRIATEVAGSLAYLHSSASIPIIHRDIKTANILLDKNLTAKVADFGASRLIPMDKEQLTTIVQGTLGY 571          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.131e-30
Identity = 73/141 (51.77%), Postives = 94/141 (66.67%), Query Frame = 3
Query:   12 RLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            RL DNN  +VEQF+NEV +L+++ H+N+V L GC    ++  LLVYEF+  G++ D LHG      L TW  R+ IAIE A A+AYLH+     IIHRD+KT NILLD N   KVADFG S+L P+D   ++T  QGT GY
Sbjct:  139 RLGDNN--QVEQFINEVLVLSQINHRNVVKLLGCCLE-TEVPLLVYEFITGGSLFDHLHGSMFVSSL-TWEHRLEIAIEVAGAIAYLHSGASIPIIHRDIKTENILLDENLTAKVADFGASKLKPMDKEQLTTMVQGTLGY 275          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 1.131e-30
Identity = 71/144 (49.31%), Postives = 96/144 (66.67%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            A+K+    + R+V+QF++EV +L+++ H+N+V + GC    ++  LLVYEF+ NGT+ D LHG      L TW  R+ IAIE A  LAYLH+S    IIHRD+KT NILLD N   KVADFG S+L P+D   ++T  QGT GY
Sbjct:  441 AIKKARLADSRQVDQFIHEVLVLSQINHRNVVKILGCCLE-TEVPLLVYEFITNGTLFDHLHGSIFDSSL-TWEHRLRIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASKLIPMDKEQLTTMVQGTLGY 582          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.633e-29
Identity = 71/144 (49.31%), Postives = 93/144 (64.58%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD---IIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVKRL  N    VE+F NEV +++ ++HKNLV L GC+    + LL VYE+V N ++ DQ   D ++  +L W  R+NI + TA  LAYLH      IIHRD+KT+N+LLD     K+ADFGL+R F LD TH+ST   GT GY
Sbjct:  341 AVKRLVFNTRDWVEEFFNEVNLISGIQHKNLVKLLGCSIEGPESLL-VYEYVPNKSL-DQFLFDESQSKVLNWSQRLNIILGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTHLSTGIAGTLGY 482          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.358e-28
Identity = 67/147 (45.58%), Postives = 98/147 (66.67%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRL---FPLDVTHVSTAPQGTPGY 425
            A+KRL   +   ++Q +NE+++L+ + H NLV L GC     +  L VYEF+ NGT+   L  +R +  L +W +R+ IA +TA+A+A+LH+S    I HRD+K++NILLD  F  K++DFGLSRL      + +H+STAPQGTPGY
Sbjct:  338 AIKRLKHKDTTSIDQVVNEIKLLSSVSHPNLVRLLGCCFADGEPFL-VYEFMPNGTLYQHLQHERGQPPL-SWQLRLAIACQTANAIAHLHSSVNPPIYHRDIKSSNILLDHEFNSKISDFGLSRLGMSTDFEASHISTAPQGTPGY 482          
The following BLAST results are available for this feature:
BLAST of CF510001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 451
Match NameE-valueIdentityDescription
Y1839_ARATH2.417e-5776.60Probable serine/threonine-protein kinase At1g18390... [more]
WAK1_ARATH1.023e-3151.39Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
WAKLO_ARATH2.278e-3148.61Wall-associated receptor kinase-like 14 OS=Arabido... [more]
WAK5_ARATH6.629e-3150.69Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
WAK4_ARATH6.629e-3151.77Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
WAK2_ARATH8.657e-3150.00Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
WAKLS_ARATH1.131e-3051.77Putative wall-associated receptor kinase-like 16 O... [more]
WAK3_ARATH1.131e-3049.31Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
CRK42_ARATH1.633e-2949.31Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
WAKLR_ARATH2.358e-2845.58Wall-associated receptor kinase-like 21 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-516 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510001 ID=CF510001; Name=CF510001; organism=Citrus sinensis; type=EST; length=426bp
TTGCAGTCAAGCGCCTATATGACAACAACTACAGAAGGGTTGAACAATTT
ATGAATGAAGTTGAAATCCTCACACGTTTGCGCCACAAAAATCTTGTCTC
CCTTTTTGGCTGCACCTCTCGTTACAGTCAGGGTCTCCTACTTGTGTATG
AATTTGTTGCCAATGGCACTGTTGCGGATCAACTCCATGGTGATCGAGCT
AAGCATGGTTTGCTGACATGGCCTATCCGTATGAACATTGCCATAGAAAC
TGCCAGTGCATTGGCATATCTTCATGCTTCTGATATCATTCATCGTGATG
TGAAGACTAACAACATTCTCCTTGACAGCAATTTTTGTGTCAAAGTTGCA
GATTTTGGGCTTTCGCGATTGTTCCCTTTAGATGTTACTCACGTCTCAAC
TGCACCACAAGGAACTCCAGGCTATG
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