CF510023
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF510023 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 2.526e-52 Identity = 93/145 (64.14%), Postives = 112/145 (77.24%), Query Frame = 1 Query: 1 TGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAAANN 435 T KW+P Y TYP+RL ER+ ELPP+D+FVTTADP EPP++ VNTVLSLLAV+YPA++LACYVSDDGCSPL ++SL EASKFAK+WVPFCKKYN+RVRAPF YF + P A EF +DWE K EYE+L +E A + Sbjct: 69 TNIKWSPADYKTYPERLDERVHELPPVDMFVTTADPVREPPLIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRAPFMYF---RNSPEAAEGSEFSKDWEMTKREYEKLSQKVEDATGS 210
BLAST of CF510023 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 2.138e-51 Identity = 93/145 (64.14%), Postives = 113/145 (77.93%), Query Frame = 1 Query: 1 TGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAAANN 435 T KW+P SY +YP+RL ER+ +LP +D+FVTTADP EPPIL NT+LSLLAV+YPA++LACYVSDDGCSPL ++SL EASKFAK+WVPFCKKYNI+VRAPFRYFL + P S EF +DWE K EYE+L +E A + Sbjct: 69 TSIKWSPASYKSYPERLDERVHDLPSVDMFVTTADPVREPPILVANTLLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNIKVRAPFRYFL---NPPAATESSEFSKDWEITKREYEKLSRRVEDATGD 210
BLAST of CF510023 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 4.459e-49 Identity = 90/145 (62.07%), Postives = 108/145 (74.48%), Query Frame = 1 Query: 1 TGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAAANN 435 T TKW+P YP RL ER+ +LP +D+FV TADP EPPI+ VNTVLSLLAV+YPA++LACYVSDDGCSPL ++SL EASKFAK+WVPFCKKYN++VRAPFRYFL EF +DWE K EYE+LC +E A + Sbjct: 69 TCTKWSPAETKPYPDRLDERVYDLPSVDMFVPTADPVREPPIMVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNLKVRAPFRYFLNPF---AATEGSEFSRDWEMTKREYEKLCRKVEDATGD 210
BLAST of CF510023 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 1.214e-46 Identity = 87/145 (60.00%), Postives = 107/145 (73.79%), Query Frame = 1 Query: 1 TGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAAANN 435 T KW+P +P RL ER+ +LP +D+FV TADP EPPI+ V+TVLSLLAV+YPA++LACYVSDDGCSPL ++SL EASKFAK+WVPFCKKYN RVRAP RYFL+ +EF +DWEK K EYE+L +E A + Sbjct: 69 TCLKWSPADTKPFPDRLDERVHDLPSVDMFVPTADPVREPPIMVVDTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNTRVRAPSRYFLKPIS--VATEDYEFNRDWEKTKREYEKLRRKVEDATGD 211
BLAST of CF510023 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 1.586e-46 Identity = 87/147 (59.18%), Postives = 108/147 (73.47%), Query Frame = 1 Query: 1 TGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWE--FQQDWEKMKEEYERLCGNIEAAANN 435 T KW+P YP RL ER+ +LP +D+FV TADP EPPI+ VNTVLSLLAV+YPA++LACYVSDDGCSPL ++SL EASKF K+W PFCKKYN+RVRAPFRYFL P ++ + F +DW+ MK EY +LC +E A + Sbjct: 69 TCIKWSPAEDKPYPNRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYFLN-----PLVATDDSVFSKDWKMMKREYVKLCRKVEDATGD 210
BLAST of CF510023 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 5.641e-44 Identity = 83/141 (58.87%), Postives = 108/141 (76.60%), Query Frame = 1 Query: 10 KWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPA--HRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAA 426 KW+P+ ++T+P+ L ERI ELP +D+FVTTADP LEPP++TVNTVLSLLA+DYPA +LACYVSDDGCSPL Y+L EA++FA+ WVPFC+++ + VRAPFRYF + P + +F +DW MK EYE+L IE A Sbjct: 71 KWSPVRFDTFPENLAERIDELPAVDMFVTTADPVLEPPLVTVNTVLSLLALDYPAAGEKLACYVSDDGCSPLTCYALREAARFARTWVPFCRRHGVAVRAPFRYFSSTPEFGP--ADGKFLEDWTFMKSEYEKLVHRIEDA 209
BLAST of CF510023 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 2.143e-43 Identity = 85/147 (57.82%), Postives = 105/147 (71.43%), Query Frame = 1 Query: 1 TGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWE--FQQDWEKMKEEYERLCGNIEAAANN 435 T KW+P Y L ER+ +LP LD+FV TAD E PI+TVNTVLSLLAV+YPA++LACYVSDDGCSPL ++SL EASKF K+W PFCKKYN+RVRAPFRYFL P ++ + F +DW+ MK EY +LC +E A + Sbjct: 69 TCLKWSPAEDIPYINTLNERVHDLPSLDMFVPTADTVRESPIITVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYFLN-----PLVATDDSVFSKDWKMMKREYVKLCRKVEDATGD 210
BLAST of CF510023 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 9.644e-36 Identity = 77/150 (51.33%), Postives = 99/150 (66.00%), Query Frame = 1 Query: 10 KWTPISYNTYPQRLQERIK----------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYP--AHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESD-EPPCASSWEFQQDWEKMKEEYERLCGNIE 420 KW+P+ + T P+ L + ELP +D+ VTTADP LEPP++TVNTVLSLLA+DYP RLACYVSDDGCSPL ++L EA+ FA WVPFC++Y + VRAPFRYF S E + +F DW MK+EY++L I+ Sbjct: 104 KWSPVRFVTRPENLVAEGRTPSTTAAEYGELPAVDMLVTTADPALEPPLVTVNTVLSLLALDYPRAGERLACYVSDDGCSPLTCHALREAAGFAAAWVPFCRRYGVAVRAPFRYFSSSSSPESGGPADRKFLDDWTFMKDEYDKLVRRIK 253
BLAST of CF510023 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSI (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 9.644e-36 Identity = 77/150 (51.33%), Postives = 99/150 (66.00%), Query Frame = 1 Query: 10 KWTPISYNTYPQRLQERIK----------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYP--AHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESD-EPPCASSWEFQQDWEKMKEEYERLCGNIE 420 KW+P+ + T P+ L + ELP +D+ VTTADP LEPP++TVNTVLSLLA+DYP RLACYVSDDGCSPL ++L EA+ FA WVPFC++Y + VRAPFRYF S E + +F DW MK+EY++L I+ Sbjct: 104 KWSPVRFVTRPENLVAEGRTPSTTAAEYGELPAVDMLVTTADPALEPPLVTVNTVLSLLALDYPRAGERLACYVSDDGCSPLTCHALREAAGFAAAWVPFCRRYGVAVRAPFRYFSSSSSPESGGPADRKFLDDWTFMKDEYDKLVRRIK 253
BLAST of CF510023 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.702e-32 Identity = 71/144 (49.31%), Postives = 90/144 (62.50%), Query Frame = 1 Query: 10 KWTPISYNTYPQRLQERIK------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEA 423 KW PI+ TY RL R + +L P+D+FV+T DP EPPI+T NT+LS+LAVDYP ++++CYVSDDG S L F +L E S+FA+ WVPFCKKYN+ RAP YF + D F +D MK EYE I A Sbjct: 265 KWFPINRETYLDRLSMRFERDGEKNKLAPVDVFVSTVDPLKEPPIITANTILSILAVDYPVNKVSCYVSDDGASMLLFDTLSETSEFARRWVPFCKKYNVEPRAPEFYFSEKIDYLKDKVQTTFVKDRRAMKREYEEFKVRINA 408 The following BLAST results are available for this feature:
BLAST of CF510023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CF510023 ID=CF510023; Name=CF510023; organism=Citrus sinensis; type=EST; length=436bpback to top |