CF510023

Overview
NameCF510023
Unique NameCF510023
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length436
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11898 contig Csv1_Contig11898:248..683. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF510023 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 2.526e-52
Identity = 93/145 (64.14%), Postives = 112/145 (77.24%), Query Frame = 1
Query:    1 TGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAAANN 435
            T  KW+P  Y TYP+RL ER+ ELPP+D+FVTTADP  EPP++ VNTVLSLLAV+YPA++LACYVSDDGCSPL ++SL EASKFAK+WVPFCKKYN+RVRAPF YF    + P  A   EF +DWE  K EYE+L   +E A  +
Sbjct:   69 TNIKWSPADYKTYPERLDERVHELPPVDMFVTTADPVREPPLIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRAPFMYF---RNSPEAAEGSEFSKDWEMTKREYEKLSQKVEDATGS 210          
BLAST of CF510023 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 2.138e-51
Identity = 93/145 (64.14%), Postives = 113/145 (77.93%), Query Frame = 1
Query:    1 TGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAAANN 435
            T  KW+P SY +YP+RL ER+ +LP +D+FVTTADP  EPPIL  NT+LSLLAV+YPA++LACYVSDDGCSPL ++SL EASKFAK+WVPFCKKYNI+VRAPFRYFL   + P    S EF +DWE  K EYE+L   +E A  +
Sbjct:   69 TSIKWSPASYKSYPERLDERVHDLPSVDMFVTTADPVREPPILVANTLLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNIKVRAPFRYFL---NPPAATESSEFSKDWEITKREYEKLSRRVEDATGD 210          
BLAST of CF510023 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 4.459e-49
Identity = 90/145 (62.07%), Postives = 108/145 (74.48%), Query Frame = 1
Query:    1 TGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAAANN 435
            T TKW+P     YP RL ER+ +LP +D+FV TADP  EPPI+ VNTVLSLLAV+YPA++LACYVSDDGCSPL ++SL EASKFAK+WVPFCKKYN++VRAPFRYFL            EF +DWE  K EYE+LC  +E A  +
Sbjct:   69 TCTKWSPAETKPYPDRLDERVYDLPSVDMFVPTADPVREPPIMVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNLKVRAPFRYFLNPF---AATEGSEFSRDWEMTKREYEKLCRKVEDATGD 210          
BLAST of CF510023 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 1.214e-46
Identity = 87/145 (60.00%), Postives = 107/145 (73.79%), Query Frame = 1
Query:    1 TGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAAANN 435
            T  KW+P     +P RL ER+ +LP +D+FV TADP  EPPI+ V+TVLSLLAV+YPA++LACYVSDDGCSPL ++SL EASKFAK+WVPFCKKYN RVRAP RYFL+          +EF +DWEK K EYE+L   +E A  +
Sbjct:   69 TCLKWSPADTKPFPDRLDERVHDLPSVDMFVPTADPVREPPIMVVDTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNTRVRAPSRYFLKPIS--VATEDYEFNRDWEKTKREYEKLRRKVEDATGD 211          
BLAST of CF510023 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 1.586e-46
Identity = 87/147 (59.18%), Postives = 108/147 (73.47%), Query Frame = 1
Query:    1 TGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWE--FQQDWEKMKEEYERLCGNIEAAANN 435
            T  KW+P     YP RL ER+ +LP +D+FV TADP  EPPI+ VNTVLSLLAV+YPA++LACYVSDDGCSPL ++SL EASKF K+W PFCKKYN+RVRAPFRYFL      P  ++ +  F +DW+ MK EY +LC  +E A  +
Sbjct:   69 TCIKWSPAEDKPYPNRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYFLN-----PLVATDDSVFSKDWKMMKREYVKLCRKVEDATGD 210          
BLAST of CF510023 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 5.641e-44
Identity = 83/141 (58.87%), Postives = 108/141 (76.60%), Query Frame = 1
Query:   10 KWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPA--HRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEAA 426
            KW+P+ ++T+P+ L ERI ELP +D+FVTTADP LEPP++TVNTVLSLLA+DYPA   +LACYVSDDGCSPL  Y+L EA++FA+ WVPFC+++ + VRAPFRYF    +  P  +  +F +DW  MK EYE+L   IE A
Sbjct:   71 KWSPVRFDTFPENLAERIDELPAVDMFVTTADPVLEPPLVTVNTVLSLLALDYPAAGEKLACYVSDDGCSPLTCYALREAARFARTWVPFCRRHGVAVRAPFRYFSSTPEFGP--ADGKFLEDWTFMKSEYEKLVHRIEDA 209          
BLAST of CF510023 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 2.143e-43
Identity = 85/147 (57.82%), Postives = 105/147 (71.43%), Query Frame = 1
Query:    1 TGTKWTPISYNTYPQRLQERIKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWE--FQQDWEKMKEEYERLCGNIEAAANN 435
            T  KW+P     Y   L ER+ +LP LD+FV TAD   E PI+TVNTVLSLLAV+YPA++LACYVSDDGCSPL ++SL EASKF K+W PFCKKYN+RVRAPFRYFL      P  ++ +  F +DW+ MK EY +LC  +E A  +
Sbjct:   69 TCLKWSPAEDIPYINTLNERVHDLPSLDMFVPTADTVRESPIITVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYFLN-----PLVATDDSVFSKDWKMMKREYVKLCRKVEDATGD 210          
BLAST of CF510023 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 9.644e-36
Identity = 77/150 (51.33%), Postives = 99/150 (66.00%), Query Frame = 1
Query:   10 KWTPISYNTYPQRLQERIK----------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYP--AHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESD-EPPCASSWEFQQDWEKMKEEYERLCGNIE 420
            KW+P+ + T P+ L    +          ELP +D+ VTTADP LEPP++TVNTVLSLLA+DYP    RLACYVSDDGCSPL  ++L EA+ FA  WVPFC++Y + VRAPFRYF   S  E    +  +F  DW  MK+EY++L   I+
Sbjct:  104 KWSPVRFVTRPENLVAEGRTPSTTAAEYGELPAVDMLVTTADPALEPPLVTVNTVLSLLALDYPRAGERLACYVSDDGCSPLTCHALREAAGFAAAWVPFCRRYGVAVRAPFRYFSSSSSPESGGPADRKFLDDWTFMKDEYDKLVRRIK 253          
BLAST of CF510023 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSI (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 9.644e-36
Identity = 77/150 (51.33%), Postives = 99/150 (66.00%), Query Frame = 1
Query:   10 KWTPISYNTYPQRLQERIK----------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYP--AHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESD-EPPCASSWEFQQDWEKMKEEYERLCGNIE 420
            KW+P+ + T P+ L    +          ELP +D+ VTTADP LEPP++TVNTVLSLLA+DYP    RLACYVSDDGCSPL  ++L EA+ FA  WVPFC++Y + VRAPFRYF   S  E    +  +F  DW  MK+EY++L   I+
Sbjct:  104 KWSPVRFVTRPENLVAEGRTPSTTAAEYGELPAVDMLVTTADPALEPPLVTVNTVLSLLALDYPRAGERLACYVSDDGCSPLTCHALREAAGFAAAWVPFCRRYGVAVRAPFRYFSSSSSPESGGPADRKFLDDWTFMKDEYDKLVRRIK 253          
BLAST of CF510023 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.702e-32
Identity = 71/144 (49.31%), Postives = 90/144 (62.50%), Query Frame = 1
Query:   10 KWTPISYNTYPQRLQERIK------ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLRESDEPPCASSWEFQQDWEKMKEEYERLCGNIEA 423
            KW PI+  TY  RL  R +      +L P+D+FV+T DP  EPPI+T NT+LS+LAVDYP ++++CYVSDDG S L F +L E S+FA+ WVPFCKKYN+  RAP  YF  + D         F +D   MK EYE     I A
Sbjct:  265 KWFPINRETYLDRLSMRFERDGEKNKLAPVDVFVSTVDPLKEPPIITANTILSILAVDYPVNKVSCYVSDDGASMLLFDTLSETSEFARRWVPFCKKYNVEPRAPEFYFSEKIDYLKDKVQTTFVKDRRAMKREYEEFKVRINA 408          
The following BLAST results are available for this feature:
BLAST of CF510023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLB4_ARATH2.526e-5264.14Cellulose synthase-like protein B4 OS=Arabidopsis ... [more]
CSLB3_ARATH2.138e-5164.14Cellulose synthase-like protein B3 OS=Arabidopsis ... [more]
CSLB2_ARATH4.459e-4962.07Cellulose synthase-like protein B2 OS=Arabidopsis ... [more]
CSLB1_ARATH1.214e-4660.00Cellulose synthase-like protein B1 OS=Arabidopsis ... [more]
CSLB6_ARATH1.586e-4659.18Cellulose synthase-like protein B6 OS=Arabidopsis ... [more]
CSLH1_ORYSJ5.641e-4458.87Cellulose synthase-like protein H1 OS=Oryza sativa... [more]
CSLB5_ARATH2.143e-4357.82Cellulose synthase-like protein B5 OS=Arabidopsis ... [more]
CSLH2_ORYSJ9.644e-3651.33Cellulose synthase-like protein H2 OS=Oryza sativa... [more]
CSLH2_ORYSI9.644e-3651.33Cellulose synthase-like protein H2 OS=Oryza sativa... [more]
CESA4_ARATH1.702e-3249.31Cellulose synthase A catalytic subunit 4 [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-538 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_B11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510023 ID=CF510023; Name=CF510023; organism=Citrus sinensis; type=EST; length=436bp
ACTGGCACCAAATGGACTCCTATATCTTACAACACTTATCCACAACGGCT
CCAAGAACGGATAAAGGAGCTTCCTCCACTAGACATTTTTGTGACAACTG
CAGATCCTTATCTAGAGCCTCCAATCCTCACAGTGAACACAGTACTCTCT
TTGTTGGCAGTTGATTATCCAGCTCATAGGCTTGCTTGCTACGTGTCTGA
TGATGGCTGCTCACCTCTCAACTTTTACTCTCTCGTTGAAGCATCAAAGT
TTGCCAAGCTTTGGGTTCCATTTTGTAAGAAGTATAATATTCGAGTTAGA
GCTCCATTTAGATACTTCTTACGTGAGTCTGATGAACCGCCTTGTGCGAG
TTCATGGGAATTCCAGCAAGACTGGGAAAAGATGAAGGAAGAGTACGAGA
GACTTTGCGGAAACATTGAAGCTGCAGCCAACAATT
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