CF510038

Overview
NameCF510038
Unique NameCF510038
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length375
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3764 contig Csv1_Contig3764:612..986. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF510038 vs. ExPASy Swiss-Prot
Match: ASO_TOBAC (L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.793e-44
Identity = 83/124 (66.94%), Postives = 99/124 (79.84%), Query Frame = 1
Query:    4 PLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVI 375
            P  PPPI P W+DY+HSKSFSNKIFALMGSPKPP   HRR+ LLNTQN I+G+TKWAINNVSL LP   YLGSI+YG+ +AFD   PP+NF  +YDV+K   N+N+T G+GVYML  NTT+D+I
Sbjct:  335 PTLPPPIAPLWNDYNHSKSFSNKIFALMGSPKPPPQNHRRIILLNTQNKIDGYTKWAINNVSLVLPTQLYLGSIRYGI-NAFDTKPPPDNFPKDYDVLKQAPNSNSTYGNGVYMLKFNTTIDII 457          
BLAST of CF510038 vs. ExPASy Swiss-Prot
Match: ASO_CUCSA (L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.192e-42
Identity = 78/125 (62.40%), Postives = 93/125 (74.40%), Query Frame = 1
Query:    1 IPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVI 375
            +P+SPPP TP W+D+D SK+F+ +IFA MGSPKPP  ++RRL LLNTQN INGF KWAINNVSL LPPTPYL ++K  L  AF+QN PPE F   YD+  PP N  TT G+GVY   +  TVDVI
Sbjct:  341 LPISPPPETPHWEDFDRSKNFTFRIFAAMGSPKPPVRYNRRLFLLNTQNRINGFMKWAINNVSLALPPTPYLAAMKMRLNTAFNQNPPPETFPLNYDINNPPPNPETTTGNGVYKFNMGETVDVI 465          
BLAST of CF510038 vs. ExPASy Swiss-Prot
Match: ASO_CUCPM (L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.192e-42
Identity = 77/125 (61.60%), Postives = 93/125 (74.40%), Query Frame = 1
Query:    1 IPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVI 375
            +P SPPP TP WDD+D SK+F+ +I A MGSPKPP  F+RR+ LLNTQN ING+ KWAIN+VSL LPPTPYLG++KY L  AFDQN PPE F  +YD+  PP N  T +G+GVY   +   VDVI
Sbjct:  306 LPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVI 430          
BLAST of CF510038 vs. ExPASy Swiss-Prot
Match: ASO_CUCMA (L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 7.052e-41
Identity = 75/125 (60.00%), Postives = 92/125 (73.60%), Query Frame = 1
Query:    1 IPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLNLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVI 375
            +P SPPP TP WDD+D SK+F+ +I A MGSPKPP   +RR+ LLNTQN ING+ KWAIN+VSL LPPTPYLG++K+ L  AFDQN PPE F  +YD+  PP N  T +G+GVY   +   VDVI
Sbjct:  336 LPTSPPPETPAWDDFDRSKNFTYRITAAMGSPKPPVKSNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKFNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTKIGNGVYQFKIGEIVDVI 460          
The following BLAST results are available for this feature:
BLAST of CF510038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ASO_TOBAC1.793e-4466.94L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE... [more]
ASO_CUCSA2.192e-4262.40L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1[more]
ASO_CUCPM2.192e-4261.60L-ascorbate oxidase OS=Cucurbita pepo var. melopep... [more]
ASO_CUCMA7.052e-4160.00L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-553 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510038 ID=CF510038; Name=CF510038; organism=Citrus sinensis; type=EST; length=375bp
ATCCCTCTCTCCCCACCACCTATAACTCCTAGATGGGACGACTATGATCA
CAGCAAATCATTCTCCAACAAAATATTTGCCCTAATGGGATCCCCCAAGC
CTCCCACAAATTTCCACCGTCGGCTCACCCTTCTTAACACTCAAAACACC
ATTAACGGGTTCACTAAGTGGGCTATTAACAATGTGTCCCTGAATTTACC
CCCCACTCCTTACTTAGGATCCATCAAATATGGTCTTAAAGATGCTTTTG
ATCAGAATGGTCCCCCCGAAAACTTCTCGAATGAGTATGACGTGATGAAA
CCTCCTGTAAACGCTAATACAACTCTTGGAAGTGGGGTTTACATGCTTGG
TTTAAACACCACAGTTGATGTTATA
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