CF510040

Overview
NameCF510040
Unique NameCF510040
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length433
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF510040 vs. ExPASy Swiss-Prot
Match: CYP37_ARATH (Peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic OS=Arabidopsis thaliana GN=CYP37 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 3.580e-14
Identity = 42/74 (56.76%), Postives = 49/74 (66.22%), Query Frame = 1 
Query:  169 FSTWNENSKDFDCNNSYFVQISTPLCLVGWDFWSVFPANAVLYSPDTKVPRTGELALRRAIPANANMKAIQVVL 390
            F   ++N +        FVQ+ +PL L G D   + PA AVLYSPDTKVPRTGELALRRAIPAN +MK IQ  L
Sbjct:   75 FEAGSKNLEKLVATILIFVQVWSPLPLFGLDSAYISPAEAVLYSPDTKVPRTGELALRRAIPANPSMKIIQASL 148
The following BLAST results are available for this feature:
BLAST of CF510040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CYP37_ARATH3.580e-1456.76Peptidyl-prolyl cis-trans isomerase CYP37, chlorop... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-555 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510040 ID=CF510040; Name=CF510040; organism=Citrus sinensis; type=EST; length=433bp
CGCCGCTCCAAAGCGCTCTTTTCTCTCATCCCAGTTCACATTTCCACTCA
ACAGGAATGAAGCTACAAGATTTGGCCATTTCAAGATTCACTGCAAGCGT
ACAAACATTAATGATACAAGGGAACCAGTGCACCAGCATGATCTTCCTAC
CAAATTATTCATATCAACTTTTCAACATGGAATGAAAACAGTAAAGACTT
TGATTGCAACAATTCTTATTTTGTCCAAATTTCTACTCCACTATGCTTGG
TTGGCTGGGACTTTTGGTCAGTTTTCCCCGCAAATGCAGTGCTTTATTCT
CCTGACACAAAGGTCCCAAGAACTGGAGAACTTGCTTTGAGAAGGGCTAT
CCCTGCAAATGCAAACATGAAGGCAATACAGGTGGTACTAGTAACATAAT
TTTTTTCCATTTCTCTAACTTACTTTGTAATCA
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