CF510045

Overview
NameCF510045
Unique NameCF510045
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length467
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6025 contig Csv1_Contig6025:922..1388. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF510045 vs. ExPASy Swiss-Prot
Match: PLT5_ARATH (Polyol transporter 5 OS=Arabidopsis thaliana GN=PLT5 PE=1 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 2.891e-58
Identity = 110/156 (70.51%), Postives = 137/156 (87.82%), Query Frame = 3
Query:    3 NDDVVQVPKIN-RGEGVWKELLVRPTPAVRHIIVAAVGIHFFQQASGIDSVVLYSPRIFEKAGITSKDEKLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITW 467
            +DDVVQV + N  GEGVW+ELL+RPTPAVR +++AA+GIHFFQQASGID+VVL+SPRIF+ AG+ +  ++LLATVAVG VKT+FILVATFLLD+IGRRPLLL+SV GM+ SLA L  SLT+IDQS KK++WA+ +AI+TV++YVA FSIG GPITW
Sbjct:  263 HDDVVQVSRRNSHGEGVWRELLIRPTPAVRRVMIAAIGIHFFQQASGIDAVVLFSPRIFKTAGLKTDHQQLLATVAVGVVKTSFILVATFLLDRIGRRPLLLTSVGGMVLSLAALGTSLTIIDQSEKKVMWAVVVAIATVMTYVATFSIGAGPITW 418          
BLAST of CF510045 vs. ExPASy Swiss-Prot
Match: PLT2_ARATH (Putative polyol transporter 2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 8.432e-50
Identity = 98/156 (62.82%), Postives = 128/156 (82.05%), Query Frame = 3
Query:    6 DDVVQVP-KINRGEGVWKELLVRPTPAVRHIIVAAVGIHFFQQASGIDSVVLYSPRIFEKAGITSKDEKLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMI-WAIGLAISTVLSYVAFFSIGMGPITW 467
            DDV+ VP K + G+GVWK+LLVRPTP+VRHI++A +GIHF QQASGID+VVLYSP IF +AG+ SK+++LLATVAVG VKT FI+V T L+D+ GRR LLL+S+ GM  SL  L  SLTVID++  + + WAIGLA++TV+++VA FS+G GP+TW
Sbjct:  254 DDVIVVPNKKSAGKGVWKDLLVRPTPSVRHILIACLGIHFSQQASGIDAVVLYSPTIFSRAGLKSKNDQLLATVAVGVVKTLFIVVGTCLVDRFGRRALLLTSMGGMFFSLTALGTSLTVIDRNPGQTLKWAIGLAVTTVMTFVATFSLGAGPVTW 409          
BLAST of CF510045 vs. ExPASy Swiss-Prot
Match: PLT1_ARATH (Putative polyol transporter 1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 1.438e-49
Identity = 98/156 (62.82%), Postives = 128/156 (82.05%), Query Frame = 3
Query:    6 DDVVQVP-KINRGEGVWKELLVRPTPAVRHIIVAAVGIHFFQQASGIDSVVLYSPRIFEKAGITSKDEKLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMI-WAIGLAISTVLSYVAFFSIGMGPITW 467
            DDV+ VP K + G+GVWK+LLVRPTP+VRHI++A +GIHF QQASGID+VVLYSP IF KAG+ SK+++LLATVAVG VKT FI+V T ++D+ GRR LLL+S+ GM  SL  L  SLTVI+++  + + WAIGLA++TV+++VA FSIG GP+TW
Sbjct:  254 DDVIVVPNKKSAGKGVWKDLLVRPTPSVRHILIACLGIHFAQQASGIDAVVLYSPTIFSKAGLKSKNDQLLATVAVGVVKTLFIVVGTCVVDRFGRRALLLTSMGGMFLSLTALGTSLTVINRNPGQTLKWAIGLAVTTVMTFVATFSIGAGPVTW 409          
BLAST of CF510045 vs. ExPASy Swiss-Prot
Match: PLT6_ARATH (Probable polyol transporter 6 OS=Arabidopsis thaliana GN=PLT6 PE=2 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 3.543e-48
Identity = 92/155 (59.35%), Postives = 119/155 (76.77%), Query Frame = 3
Query:    6 DDVVQVP-KINRGEGVWKELLVRPTPAVRHIIVAAVGIHFFQQASGIDSVVLYSPRIFEKAGITSKDEKLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITW 467
            DDVV++  K   GEGVWKEL++RPTPAVR +++ A+GIHFFQ ASGI++V+LY PRIF+KAGIT+KD+  L T+ VG +KTTFI  AT LLDK+GRR LLL+SV GM+ +L  L   LT+   +  K+ WA+ L+I    S+VAFFSIG+GPITW
Sbjct:  245 DDVVKMEGKKTHGEGVWKELILRPTPAVRRVLLTALGIHFFQHASGIEAVLLYGPRIFKKAGITTKDKLFLVTIGVGIMKTTFIFTATLLLDKVGRRKLLLTSVGGMVIALTMLGFGLTMAQNAGGKLAWALVLSIVAAYSFVAFFSIGLGPITW 399          
BLAST of CF510045 vs. ExPASy Swiss-Prot
Match: PLT3_ARATH (Probable polyol transporter 3 OS=Arabidopsis thaliana GN=PLT3 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 2.296e-47
Identity = 89/149 (59.73%), Postives = 121/149 (81.21%), Query Frame = 3
Query:   21 VPKINRGEGVWKELLVRPTPAVRHIIVAAVGIHFFQQASGIDSVVLYSPRIFEKAGITSKDEKLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITW 467
            V K N G+ VW+EL+++P PAVR I++AAVGIHFF+ A+GI++VVLYSPRIF+KAG+ SKD+ LLATV VG  K  FI++ATFLLDK+GRR LLL+S  GM+ +L +LA+SLT++ Q   ++ WA+ L+I +  ++VAFFSIG+GPITW
Sbjct:  256 VKKKNHGKSVWRELVIKPRPAVRLILIAAVGIHFFEHATGIEAVVLYSPRIFKKAGVVSKDKLLLATVGVGLTKAFFIIIATFLLDKVGRRKLLLTSTGGMVFALTSLAVSLTMV-QRFGRLAWALSLSIVSTYAFVAFFSIGLGPITW 403          
BLAST of CF510045 vs. ExPASy Swiss-Prot
Match: PLT4_ARATH (Probable polyol transporter 4 OS=Arabidopsis thaliana GN=PLT4 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.159e-29
Identity = 70/140 (50.00%), Postives = 89/140 (63.57%), Query Frame = 3
Query:   48 VWKELLVRPTPAVRHIIVAAVGIHFFQQASGIDSVVLYSPRIFEKAGITSKDEKLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITW 467
            VW+ELL  P+P VR +++   GI  FQQ +GID+ V YSP I ++AGI  + + L ATVAVG  KT FIL ATFL+D +GR+PLL  S  GM   L  L+ +LT + Q        I LA+  V   VAFFSIGMGP+ W
Sbjct:  286 VWRELL-SPSPVVRKMLIVGFGIQCFQQITGIDATVYYSPEILKEAGIQDETKLLAATVAVGVTKTVFILFATFLIDSVGRKPLLYVSTIGMTLCLFCLSFTLTFLGQG----TLGITLALLFVCGNVAFFSIGMGPVCW 420          
BLAST of CF510045 vs. ExPASy Swiss-Prot
Match: GTR1_RABIT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Oryctolagus cuniculus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 9.093e-20
Identity = 52/131 (39.69%), Postives = 79/131 (60.31%), Query Frame = 3
Query:   75 TPAVRHIIVAAVGIHFFQQASGIDSVVLYSPRIFEKAGITSKDEKLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITW 467
            +PA R  I++AV +   QQ SGI++V  YS  IFEKAG+    + + AT+  G V T F +V+ F++++ GRR L L  +AGM A    + I+L +++Q    + W   L+I  +  +VAFF +G GPI W
Sbjct:  265 SPAYRQPILSAVVLQLSQQLSGINAVFYYSTSIFEKAGV---QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAACAVLMTIALALLEQ----LPWMSYLSIVAIFGFVAFFEVGPGPIPW 388          
BLAST of CF510045 vs. ExPASy Swiss-Prot
Match: GTR1_CHICK (Solute carrier family 2, facilitated glucose transporter member 1 OS=Gallus gallus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.551e-19
Identity = 52/131 (39.69%), Postives = 78/131 (59.54%), Query Frame = 3
Query:   75 TPAVRHIIVAAVGIHFFQQASGIDSVVLYSPRIFEKAGITSKDEKLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITW 467
            +P  R  I+ A+ +   QQ SGI++V  YS  IFEK+G+   ++ + AT+  G V T F +V+ F++++ GRR L L  +AGM      + I+LT++DQ    M W   L+I  +  +VAFF IG GPI W
Sbjct:  264 SPMYRQPILIAIVLQLSQQLSGINAVFYYSTSIFEKSGV---EQPVYATIGSGVVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAILMTIALTLLDQ----MPWMSYLSIVAIFGFVAFFEIGPGPIPW 387          
BLAST of CF510045 vs. ExPASy Swiss-Prot
Match: GTR1_RAT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Rattus norvegicus GN=Slc2a1 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.513e-19
Identity = 51/131 (38.93%), Postives = 77/131 (58.78%), Query Frame = 3
Query:   75 TPAVRHIIVAAVGIHFFQQASGIDSVVLYSPRIFEKAGITSKDEKLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITW 467
            +PA R  I+ AV +   QQ SGI++V  YS  IFEKAG+    + + AT+  G V T F +V+ F++++ GRR L L  +AGM      + I+L +++Q    + W   L+I  +  +VAFF +G GPI W
Sbjct:  265 SPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGV---QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLEQ----LPWMSYLSIVAIFGFVAFFEVGPGPIPW 388          
BLAST of CF510045 vs. ExPASy Swiss-Prot
Match: GTR1_HUMAN (Solute carrier family 2, facilitated glucose transporter member 1 OS=Homo sapiens GN=SLC2A1 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 5.894e-19
Identity = 51/131 (38.93%), Postives = 77/131 (58.78%), Query Frame = 3
Query:   75 TPAVRHIIVAAVGIHFFQQASGIDSVVLYSPRIFEKAGITSKDEKLLATVAVGFVKTTFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITW 467
            +PA R  I+ AV +   QQ SGI++V  YS  IFEKAG+    + + AT+  G V T F +V+ F++++ GRR L L  +AGM      + I+L +++Q    + W   L+I  +  +VAFF +G GPI W
Sbjct:  265 SPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGV---QQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAILMTIALALLEQ----LPWMSYLSIVAIFGFVAFFEVGPGPIPW 388          
The following BLAST results are available for this feature:
BLAST of CF510045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
PLT5_ARATH2.891e-5870.51Polyol transporter 5 OS=Arabidopsis thaliana GN=PL... [more]
PLT2_ARATH8.432e-5062.82Putative polyol transporter 2 OS=Arabidopsis thali... [more]
PLT1_ARATH1.438e-4962.82Putative polyol transporter 1 OS=Arabidopsis thali... [more]
PLT6_ARATH3.543e-4859.35Probable polyol transporter 6 OS=Arabidopsis thali... [more]
PLT3_ARATH2.296e-4759.73Probable polyol transporter 3 OS=Arabidopsis thali... [more]
PLT4_ARATH2.159e-2950.00Probable polyol transporter 4 OS=Arabidopsis thali... [more]
GTR1_RABIT9.093e-2039.69Solute carrier family 2, facilitated glucose trans... [more]
GTR1_CHICK1.551e-1939.69Solute carrier family 2, facilitated glucose trans... [more]
GTR1_RAT4.513e-1938.93Solute carrier family 2, facilitated glucose trans... [more]
GTR1_HUMAN5.894e-1938.93Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-560 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510045 ID=CF510045; Name=CF510045; organism=Citrus sinensis; type=EST; length=467bp
GCAACGACGACGTCGTTCAAGTACCGAAAATCAACCGTGGCGAAGGCGTA
TGGAAAGAGCTGCTGGTCCGTCCTACACCGGCCGTTCGTCACATCATAGT
CGCAGCCGTTGGTATTCATTTCTTCCAACAAGCATCCGGCATAGACTCTG
TCGTTCTTTACAGTCCTAGAATCTTTGAAAAAGCTGGGATTACGTCAAAA
GACGAAAAGTTACTCGCTACTGTAGCCGTTGGATTTGTCAAGACCACTTT
CATCCTAGTGGCTACGTTTTTACTCGACAAAATCGGACGGCGTCCGTTGC
TTTTGAGCAGTGTTGCGGGCATGATCGCCTCGCTCGCGACCCTTGCTATC
TCTCTCACAGTCATAGATCAGTCACACAAAAAGATGATCTGGGCCATTGG
TTTGGCCATCTCAACGGTTTTATCCTACGTGGCGTTTTTCTCAATCGGGA
TGGGGCCCATCACGTGG
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