CF510061

Overview
NameCF510061
Unique NameCF510061
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length478
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510061 vs. ExPASy Swiss-Prot
Match: CML27_ARATH (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana GN=CML27 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 8.678e-45
Identity = 87/130 (66.92%), Postives = 108/130 (83.08%), Query Frame = 3
Query:   87 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDAHGDGNVNFEE 476
            EE++K+F+QFD+N DGKIS+ EL  V K+MG+SY E EL RV+E++DTD+DG+I+L EF T+CR+SS A   AE+R+AFDLYDQDKNGLISA EL+ VLNRLG+ CSV+ C  MI PVDA GDGNVNFEE
Sbjct:   22 EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFSTLCRSSSSA---AEIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMIGPVDADGDGNVNFEE 148          
BLAST of CF510061 vs. ExPASy Swiss-Prot
Match: CML26_ARATH (Probable calcium-binding protein CML26 OS=Arabidopsis thaliana GN=CML26 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.363e-42
Identity = 88/147 (59.86%), Postives = 111/147 (75.51%), Query Frame = 3
Query:   39 ATTEADSNRKQLIVSRE-EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDAHGDGNVNFEE 476
            A T  +S  K    S + E++K+F++FDAN DGKIS++EL  V KSMG+SY EEEL RV++++D D DGFI+  EF TICR+SS A    E+REAFDLYDQ+KNGLIS+ E++ VLNRLG+ CSV+ CV MI  VD  GDGNVNFEE
Sbjct:    2 ANTNLESTNKSTTPSTDMELKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQEEFATICRSSSSA---VEIREAFDLYDQNKNGLISSSEIHKVLNRLGMTCSVEDCVRMIGHVDTDGDGNVNFEE 145          
BLAST of CF510061 vs. ExPASy Swiss-Prot
Match: ALL8_OLEEU (Calcium-binding allergen Ole e 8 OS=Olea europaea PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 5.638e-36
Identity = 78/152 (51.32%), Postives = 106/152 (69.74%), Query Frame = 3
Query:   33 MAATTEADSNRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSS----GAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDAHGDGNVNFEE 476
            MAA T+ +S     +    E+Q +FN+FDAN DGKIS  ELA VLK++GS+  +EE+ R+ME++DTDKDGFI++ EF    +  +     + GE EL+EAF+LYDQD NGLIS+ EL+ +L RLG + +   CV MIK VD+ GDG V+FEE
Sbjct:    1 MAANTDRNSKPSVYLQEPNEVQGVFNRFDANGDGKISGDELAGVLKALGSNTSKEEIGRIMEEIDTDKDGFINVQEFAAFVKAETDPYPSSGGENELKEAFELYDQDHNGLISSVELHKILTRLGERYAEHDCVEMIKSVDSDGDGYVSFEE 152          
BLAST of CF510061 vs. ExPASy Swiss-Prot
Match: CML18_ORYSJ (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica GN=CML18 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 2.710e-30
Identity = 70/142 (49.30%), Postives = 95/142 (66.90%), Query Frame = 3
Query:   90 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSG------------AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDAHGDGNVNFEE 476
            E++++F ++DAN DGKIS  ELA+VL+++G+     E+ R+M+++D+D+DGF+ LSEF    C  +              AA EAELREAF +YD D NG ISA EL+ VL +LG KCSV  C  MI+ VDA GDG VNF+E
Sbjct:    5 ELEQVFRRYDANGDGKISAEELASVLRALGAPLGPGEVRRMMDEMDSDRDGFVDLSEFAAFHCGPTPAHGGKGGDAKDQEAASEAELREAFRMYDADSNGKISARELHRVLRQLGDKCSVADCSRMIRSVDADGDGCVNFDE 146          
BLAST of CF510061 vs. ExPASy Swiss-Prot
Match: CML10_ORYSJ (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica GN=CML10 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.487e-28
Identity = 66/132 (50.00%), Postives = 91/132 (68.94%), Query Frame = 3
Query:   87 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSG--AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDAHGDGNVNFEE 476
            EEM+++F +FDAN DG+IS +EL  + +S+G +  ++EL R+M + D D DGFISL EF  +  T+SG  AA E +LR AF ++D D NG ISA EL  VL+ LG K +V  C  MI+ VD +GDG ++FEE
Sbjct:   39 EEMERVFRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADADGDGFISLDEFAALNATASGDAAAVEEDLRHAFRVFDADGNGTISAAELARVLHGLGEKATVQQCRRMIEGVDQNGDGLISFEE 170          
BLAST of CF510061 vs. ExPASy Swiss-Prot
Match: CML23_ARATH (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.644e-27
Identity = 61/135 (45.19%), Postives = 89/135 (65.93%), Query Frame = 3
Query:   81 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEA---ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDAHGDGNVNFEE 476
            S E+++K+F +FD N DGKIS+ EL  V+ ++  +  +EE   +M++ D D +GFI L EF  + + S  ++  +   +L+EAFDLYD D+NG ISA EL+ V+  LG KCS+  C  MI  VD+ GDG V+FEE
Sbjct:   12 SMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDEFVALFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEKCSIQDCQRMINKVDSDGDGCVDFEE 146          
BLAST of CF510061 vs. ExPASy Swiss-Prot
Match: CML24_ARATH (Calcium-binding protein CML24 OS=Arabidopsis thaliana GN=CML24 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 3.663e-27
Identity = 62/137 (45.26%), Postives = 87/137 (63.50%), Query Frame = 3
Query:   81 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGE-----AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDAHGDGNVNFEE 476
            S ++++K+F +FD N DGKIS+ EL  V++++  +   EE V +M+  D D +GFI L EF  + +   G  G      ++L+EAF+LYD D NG ISA+EL+ V+  LG KCSV  C  MI  VD  GDG VNF+E
Sbjct:   14 SMDDIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLDGNGFIDLDEFVALFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGEKCSVQDCKKMISKVDIDGDGCVNFDE 150          
BLAST of CF510061 vs. ExPASy Swiss-Prot
Match: CML15_ORYSJ (Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica GN=CML15 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.178e-25
Identity = 59/134 (44.03%), Postives = 87/134 (64.93%), Query Frame = 3
Query:   81 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSG--AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDAHGDGNVNFEE 476
            + +E +++F +FDAN DG+IS  ELA + +S+G +  ++E+ R+M++ D+D DG+ISL EF  I     G  AA E +LR AF ++D D NG+I+  EL  VL  +G   +V  C  MI  VD +GDG +NFEE
Sbjct:   52 AEDETERVFRKFDANGDGRISRAELAALFRSVGHAVTDDEVARMMQEADSDGDGYISLGEFAAISAPPPGDAAAAEEDLRHAFGVFDADGNGVITPAELARVLRGIGEAATVAQCRRMIDGVDRNGDGLINFEE 185          
BLAST of CF510061 vs. ExPASy Swiss-Prot
Match: CML16_ORYSJ (Probable calcium-binding protein CML16 OS=Oryza sativa subsp. japonica GN=CML16 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 7.637e-25
Identity = 68/160 (42.50%), Postives = 93/160 (58.13%), Query Frame = 3
Query:   33 MAATTEADSNRKQ-------LIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEE----ELVRVMEDLDTDKDGFISLSEFETICRTSSG-AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDAHGDGNVNFEE 476
            M+ TTE    ++Q       L  +  E++++F +FDA+ DG+IS +ELA V +++     E     E+  +M +LDTD+DGF+ L EF        G A  EAELR AFD+YD D +G I+A EL  VL R+G  CS + C  MI  VD  GDG V FEE
Sbjct:    1 MSNTTEKKMPQQQQVERPTALAPADAEIERVFTRFDADGDGRISPSELAAVTRAIAPPPSESAGGREVAAMMNELDTDRDGFVDLGEFAAFHGRGRGDAEHEAELRAAFDVYDVDGDGRITAAELGKVLGRIGEGCSAEECERMIASVDVDGDGCVGFEE 160          
BLAST of CF510061 vs. ExPASy Swiss-Prot
Match: CML25_ARATH (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana GN=CML25 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.219e-22
Identity = 56/130 (43.08%), Postives = 78/130 (60.00%), Query Frame = 3
Query:   90 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAE-LREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDAHGDGNVNFEE 476
            E++ +F +FD N DGKIS  EL  ++ S+G    EEEL + + ++D   DG+I+  EF  +           E L++AF +YD D NG ISAEEL+ VL  LG +CS+  C  MI  VD  GDG ++FEE
Sbjct:   37 ELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFVELNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSIAECRKMIGGVDKDGDGTIDFEE 166          
The following BLAST results are available for this feature:
BLAST of CF510061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
CML27_ARATH8.678e-4566.92Probable calcium-binding protein CML27 OS=Arabidop... [more]
CML26_ARATH2.363e-4259.86Probable calcium-binding protein CML26 OS=Arabidop... [more]
ALL8_OLEEU5.638e-3651.32Calcium-binding allergen Ole e 8 OS=Olea europaea ... [more]
CML18_ORYSJ2.710e-3049.30Probable calcium-binding protein CML18 OS=Oryza sa... [more]
CML10_ORYSJ1.487e-2850.00Probable calcium-binding protein CML10 OS=Oryza sa... [more]
CML23_ARATH1.644e-2745.19Probable calcium-binding protein CML23 OS=Arabidop... [more]
CML24_ARATH3.663e-2745.26Calcium-binding protein CML24 OS=Arabidopsis thali... [more]
CML15_ORYSJ1.178e-2544.03Probable calcium-binding protein CML15 OS=Oryza sa... [more]
CML16_ORYSJ7.637e-2542.50Probable calcium-binding protein CML16 OS=Oryza sa... [more]
CML25_ARATH1.219e-2243.08Probable calcium-binding protein CML25 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-576 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510061 ID=CF510061; Name=CF510061; organism=Citrus sinensis; type=EST; length=478bp
CCCCCAAACAGAACAAAAGAAAAAGAAAAGCAATGGCAGCAACAACGGAG
GCAGATTCGAATAGGAAACAGCTAATAGTGAGCCGGGAGGAGATGCAGAA
GATCTTCAACCAGTTCGACGCGAACAAGGACGGCAAGATCTCGCTGACGG
AGCTGGCGACCGTTTTGAAATCAATGGGATCGAGCTACAAAGAGGAGGAG
CTCGTCCGCGTCATGGAGGATCTCGATACCGACAAGGACGGATTCATCAG
CCTGTCGGAGTTCGAAACGATCTGCCGGACCTCCTCTGGTGCCGCCGGCG
AGGCCGAGCTCCGCGAGGCGTTTGATCTCTACGATCAGGACAAGAACGGC
TTGATTTCGGCGGAGGAGTTGAATTTGGTGTTGAACAGGCTCGGAATTAA
GTGCTCGGTTGATGGATGTGTGGCGATGATTAAGCCGGTGGATGCCCATG
GTGATGGCAATGTGAATTTTGAAGAGTT
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