CF510068
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF510068 vs. ExPASy Swiss-Prot
Match: XAF1_HUMAN (XIAP-associated factor 1 OS=Homo sapiens GN=XAF1 PE=1 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 1.540e-12 Identity = 25/74 (33.78%), Postives = 38/74 (51.35%), Query Frame = 2 Query: 2 RNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQ 223 R L C C + VP++ EEH H V C+ C ++M++ L HK +C +R V C FC+ + L H+ Sbjct: 29 RFLVLCPECEEPVPKETMEEHCKLEHQQVGCTMCQQSMQKSSLEFHKANECQERPVECKFCKLDMQLSKLELHE 102 HSP 2 Score: 34.2686 bits (77), Expect = 1.540e-12 Identity = 18/63 (28.57%), Postives = 28/63 (44.44%), Query Frame = 3 Query: 324 CGNRTELCHLCNRYIRLRERYNHESRCTGVPENTVGSSRNVRAAESDQGAHRRPAPPPPNEFY 512 CG+RTELC C ++I R H C + +G + A E + H P N+++ Sbjct: 105 CGSRTELCQGCGQFIMHRMLAQHRDVCRS-EQAQLGKGERISAPEREIYCHYCNQMIPENKYF 166
BLAST of CF510068 vs. ExPASy Swiss-Prot
Match: TRAD1_RAT (TRAF-type zinc finger domain-containing protein 1 OS=Rattus norvegicus GN=Trafd1 PE=2 SV=2) HSP 1 Score: 53.5286 bits (127), Expect = 4.500e-11 Identity = 24/74 (32.43%), Postives = 37/74 (50.00%), Query Frame = 2 Query: 2 RNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQ 223 RN+ C VC + P+ + H H V C +C++ +E+ L H +CP R+ C C+ L V L EH+ Sbjct: 34 RNIGVCPVCKEPFPKSDMDIHVATEHCQVTC-KCNKKLEKRQLKQHVETECPLRLAVCQHCDLELSVVKLKEHE 106 HSP 2 Score: 33.113 bits (74), Expect = 4.500e-11 Identity = 14/34 (41.18%), Postives = 19/34 (55.88%), Query Frame = 3 Query: 318 EVCGNRTELCHLCNRYIRLRERYNHESRCTGVPE 419 + CG RTELC C R + ++E H + C V E Sbjct: 107 DYCGARTELCGSCGRNVLVKELQTHPAVCGRVEE 140
BLAST of CF510068 vs. ExPASy Swiss-Prot
Match: TRAD1_MACFA (TRAF-type zinc finger domain-containing protein 1 OS=Macaca fascicularis GN=TRAFD1 PE=2 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 5.840e-11 Identity = 23/74 (31.08%), Postives = 39/74 (52.70%), Query Frame = 2 Query: 2 RNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQ 223 RN+ C +C + P+ E H H V C +C++ +E+ +L H+ +CP R+ C C+ L + L EH+ Sbjct: 34 RNIGMCPICKEPFPKSDMETHMAAEHCQVTC-KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHE 106 HSP 2 Score: 29.261 bits (64), Expect = 5.840e-11 Identity = 11/29 (37.93%), Postives = 16/29 (55.17%), Query Frame = 3 Query: 318 EVCGNRTELCHLCNRYIRLRERYNHESRC 404 + CG RTELC C R + +++ H C Sbjct: 107 DYCGARTELCGNCGRNVLVKDLKTHPEVC 135
BLAST of CF510068 vs. ExPASy Swiss-Prot
Match: TRAD1_MOUSE (TRAF-type zinc finger domain-containing protein 1 OS=Mus musculus GN=Trafd1 PE=1 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 7.580e-11 Identity = 24/74 (32.43%), Postives = 37/74 (50.00%), Query Frame = 2 Query: 2 RNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQ 223 RN+ C VC + P+ + H H V C +C++ +E+ L H +CP R+ C C+ L V L EH+ Sbjct: 34 RNIGVCPVCKEPFPKSDMDIHMAAEHCQVTC-KCNKKLEKRQLKQHAETECPLRLAVCQHCDLELSVVKLKEHE 106 HSP 2 Score: 32.3426 bits (72), Expect = 7.580e-11 Identity = 14/34 (41.18%), Postives = 18/34 (52.94%), Query Frame = 3 Query: 318 EVCGNRTELCHLCNRYIRLRERYNHESRCTGVPE 419 + CG RTELC C R + ++E H C V E Sbjct: 107 DYCGARTELCGSCGRNVLVKELKTHPEVCGRVEE 140 The following BLAST results are available for this feature:
BLAST of CF510068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF510068 ID=CF510068; Name=CF510068; organism=Citrus sinensis; type=EST; length=536bpback to top |