CF510074

Overview
NameCF510074
Unique NameCF510074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF510074 vs. ExPASy Swiss-Prot
Match: DPNPM_ARATH (Putative PAP-specific phosphatase, mitochondrial OS=Arabidopsis thaliana GN=At4g05090 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.331e-12
Identity = 32/48 (66.67%), Postives = 41/48 (85.42%), Query Frame = 1 
Query:    1 GKVTDWRGSPIDLDADQAERRAIFPSGGVLVTNDNLHHQIVEMISSRS 144
            GKVTDW G  I+L+ DQ+ERR IFP+GGV+V+N +LH+QI+EMISS S
Sbjct:  347 GKVTDWEGDEINLEEDQSERRLIFPAGGVVVSNGSLHNQILEMISSAS 394
The following BLAST results are available for this feature:
BLAST of CF510074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DPNPM_ARATH2.331e-1266.67Putative PAP-specific phosphatase, mitochondrial O... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-589 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_G06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510074 ID=CF510074; Name=CF510074; organism=Citrus sinensis; type=EST; length=412bp
GGAAAGGTTACTGACTGGAGAGGAAGTCCAATTGATCTTGATGCTGATCA
AGCAGAACGGAGAGCCATATTTCCTTCAGGTGGCGTTCTTGTGACTAATG
ACAACTTACATCATCAGATCGTGGAGATGATCTCTTCACGTTCATCAATT
TTTTGATGGTAGATGCTGTCAATCTAGGTGTTCTGTCTGAGTGACCAAAA
AAGAAAGTTGTTTTAGGTTTTAGGCGATTCTACAATTCTTAAAATGACAC
AAGATCGCACGAAATATGTACTGTATAAAAGCTAAAGTGAAGCCATTCGA
TTATTTCATTGGGATTGATCTTCATCTTGATTCAATTTGTAATAATGGAT
AAAGGCCAATACCATTTGATATACGTACCTTCTCGATTCGAGTAAAAAAA
AAAAAAAAAAAA
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