CF510075

Overview
NameCF510075
Unique NameCF510075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length395
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11833 contig Csv1_Contig11833:75..469. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: BCAT2_ARATH (Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 2.881e-55
Identity = 101/132 (76.52%), Postives = 116/132 (87.88%), Query Frame = 3
Query:    3 PADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFL 395
            PADYMY MKCS D  F +G LS YG I+LSPS+GVLNYGQ ++EG KAYRKE+G+L+LFRPD NAIR++ GAERM MPSPS+DQF+ AVKQTALANKRWVPP GKG+LYIRPLL+GSGPILGL PAPEYTF+
Sbjct:   67 PADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFI 198          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: BCAT5_ARATH (Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 2.439e-54
Identity = 93/132 (70.45%), Postives = 117/132 (88.64%), Query Frame = 3
Query:    3 PADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFL 395
            P DYMY MKCS D  F +G+L  +G I+++P++GVLNYGQGLFEG+KAYRK+DG ++LFRP++NAIR++ GAERMCMPSP+++QF+ AVK T LANKRW+PPPGKGSLYIRPLL+G+G +LGLAPAPEYTFL
Sbjct:   93 PTDYMYAMKCSRDGEFSQGQLQPFGNIDINPAAGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAIRMRNGAERMCMPSPTVEQFVEAVKTTVLANKRWIPPPGKGSLYIRPLLMGTGAVLGLAPAPEYTFL 224          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: BCAT3_ARATH (Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 4.600e-53
Identity = 94/133 (70.68%), Postives = 117/133 (87.97%), Query Frame = 3
Query:    3 PADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQ-LVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFL 395
            PADYMY MKC+ D  F KG L R+G IE+SPS+GVLNYGQGLFEG+KAYRK+DG  ++LFRP++NA R++ GAERMCMP+P+++QF+ AV +T LANKRWVPPPGKGSLY+RPLL+G+G +LGLAPAPEYTF+
Sbjct:   90 PADYMYVMKCNIDGEFSKGELQRFGNIEISPSAGVLNYGQGLFEGLKAYRKKDGNNILLFRPEENAKRMRNGAERMCMPAPTVEQFVEAVTETVLANKRWVPPPGKGSLYVRPLLMGTGAVLGLAPAPEYTFI 222          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: BCAT7_ARATH (Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 1.809e-49
Identity = 88/132 (66.67%), Postives = 107/132 (81.06%), Query Frame = 3
Query:    3 PADYMYTMKCSN-DYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFL 395
            P DYMY  KC   + F  G +  YG I +SP +G+LNYGQGLFEG+KAYR EDG++ LFRPDQNAIR+QTGA+R+CM  PS +QF+ AVKQT LAN +WVPPPGKG+LYIRPLL+G+G +LG+A APEYTFL
Sbjct:   35 PTDYMYVAKCKQGESFSTGEIVPYGDISISPCAGILNYGQGLFEGLKAYRTEDGRITLFRPDQNAIRMQTGADRLCMTPPSPEQFVEAVKQTVLANNKWVPPPGKGALYIRPLLIGTGAVLGVASAPEYTFL 166          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: BCAT6_ARATH (Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 3.085e-49
Identity = 88/132 (66.67%), Postives = 109/132 (82.58%), Query Frame = 3
Query:    3 PADYMYTMKC-SNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFL 395
            P DYMY  KC   + F +G++  YG I +SP S +LNYGQGLFEG+KAYR ED ++ +FRPDQNA+R+QTGAER+CM  P+++QF+ AVKQT LANK+WVPPPGKG+LYIRPLL+GSG  LG+APAPEYTFL
Sbjct:   32 PIDYMYVAKCRQGESFTQGKIVPYGDISISPCSPILNYGQGLFEGLKAYRTEDDRIRIFRPDQNALRMQTGAERLCMTPPTLEQFVEAVKQTVLANKKWVPPPGKGTLYIRPLLLGSGATLGVAPAPEYTFL 163          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: BCAT1_ARATH (Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 1.693e-47
Identity = 89/130 (68.46%), Postives = 108/130 (83.08%), Query Frame = 3
Query:    9 DYMYTMK-CSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFL 395
            D+M+  K C +  FE+G LSRYG IEL+P++G+LNYGQGL EGMKAYR EDG+++LFRP+ NA+R++ GAERMCM SPS+ QFI  VKQT LAN+RWVPPPGKGSLY+RPLL GSG  LG+A A EYTFL
Sbjct:   65 DFMFATKSCRDGNFEQGYLSRYGNIELNPAAGILNYGQGLIEGMKAYRGEDGRVLLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLANRRWVPPPGKGSLYLRPLLFGSGASLGVAAASEYTFL 194          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: BCAT4_ARATH (Probable branched-chain-amino-acid aminotransferase 4 OS=Arabidopsis thaliana GN=BCAT4 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 3.530e-45
Identity = 79/129 (61.24%), Postives = 106/129 (82.17%), Query Frame = 3
Query:    9 DYMYTMKCSN-DYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTF 392
            DYMY  KC++ + F++G++  +  ++L+P + VL YGQGL+EG+KAYR EDG+++LFRPDQN +RLQ GA+R+ MP PS+DQF+ A+KQ ALANK+W+PPPGKG+LYIRP+L GSGPILG  P PE TF
Sbjct:   33 DYMYVAKCNHGESFQEGKILPFADLQLNPCAAVLQYGQGLYEGLKAYRTEDGRILLFRPDQNGLRLQAGADRLYMPYPSVDQFVSAIKQVALANKKWIPPPGKGTLYIRPILFGSGPILGSFPIPETTF 161          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: ILVE_HELPJ (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori J99 GN=ilvE PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.630e-24
Identity = 56/130 (43.08%), Postives = 80/130 (61.54%), Query Frame = 3
Query:    9 DYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKG-SLYIRPLLVGSGPILGLAPAPEYTFL 395
            D+ +     N  + +G L     ++LS  S VL+YGQ  FEG+KAYR + G+ +LFRP +NA RLQT  ER+ MP  S + F+ A  +   AN++W+ P   G SLY+RP ++G G  LG+ PA EY F+
Sbjct:   20 DFRFIATYKNGSWSQGELVSENALQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLKACAEVIKANQKWLAPYKSGASLYLRPFVIGVGDNLGVKPASEYLFI 149          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: ILVE_HELPY (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori GN=ilvE PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.859e-24
Identity = 56/130 (43.08%), Postives = 80/130 (61.54%), Query Frame = 3
Query:    9 DYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKG-SLYIRPLLVGSGPILGLAPAPEYTFL 395
            D+ +     N  + +G L     ++LS  S VL+YGQ  FEG+KAYR + G+ +LFRP +NA RLQT  ER+ MP  S + F+ A  +   AN++W+ P   G SLY+RP ++G G  LG+ PA EY F+
Sbjct:   20 DFRFIATYKNGSWSQGGLVSENMLQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLRACAEVVKANQKWLAPYKSGASLYLRPFVIGVGDNLGVKPANEYLFI 149          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: ILVE1_BACSU (Branched-chain-amino-acid transaminase 1 OS=Bacillus subtilis GN=ilvE PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.705e-23
Identity = 55/130 (42.31%), Postives = 76/130 (58.46%), Query Frame = 3
Query:    9 DYMYTMKCSNDY-FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFL 395
            DYM+ M       +   R++ Y  + L PSS V +YGQ +FEG+KAYR +DG+++LFRPDQN  RL    ERM MP    +  + A+ Q     K WVP     SLYIRP ++ + P LG+  +  YTF+
Sbjct:   30 DYMFVMDYEEGIGWHHPRIAPYAPLTLDPSSSVFHYGQAVFEGLKAYRTDDGRVLLFRPDQNIKRLNRSCERMSMPPLDEELVLEALTQLVELEKDWVPKEKGTSLYIRPFVIATEPSLGVKASRSYTFM 159          
The following BLAST results are available for this feature:
BLAST of CF510075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
BCAT2_ARATH2.881e-5576.52Branched-chain-amino-acid aminotransferase 2, chlo... [more]
BCAT5_ARATH2.439e-5470.45Branched-chain-amino-acid aminotransferase 5, chlo... [more]
BCAT3_ARATH4.600e-5370.68Branched-chain-amino-acid aminotransferase 3, chlo... [more]
BCAT7_ARATH1.809e-4966.67Putative branched-chain-amino-acid aminotransferas... [more]
BCAT6_ARATH3.085e-4966.67Branched-chain-amino-acid aminotransferase 6 OS=Ar... [more]
BCAT1_ARATH1.693e-4768.46Branched-chain-amino-acid aminotransferase 1, mito... [more]
BCAT4_ARATH3.530e-4561.24Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_HELPJ2.630e-2443.08Branched-chain-amino-acid aminotransferase OS=Heli... [more]
ILVE_HELPY5.859e-2443.08Branched-chain-amino-acid aminotransferase OS=Heli... [more]
ILVE1_BACSU1.705e-2342.31Branched-chain-amino-acid transaminase 1 OS=Bacill... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-590 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510075 ID=CF510075; Name=CF510075; organism=Citrus sinensis; type=EST; length=395bp
CACCAGCGGACTACATGTACACCATGAAATGTTCTAACGACTATTTTGAG
AAAGGACGGCTGAGTCGCTATGGAAAGATTGAGTTGAGCCCTTCTTCAGG
AGTCTTAAATTATGGGCAGGGACTCTTTGAAGGTATGAAAGCATACAGAA
AGGAAGATGGGCAACTTGTTCTCTTCCGTCCTGATCAAAATGCCATCCGC
TTGCAAACTGGTGCCGAGAGAATGTGCATGCCTTCTCCCTCAATTGATCA
ATTCATTGTCGCTGTTAAACAAACTGCTCTTGCCAATAAGCGTTGGGTTC
CTCCTCCTGGGAAAGGGTCTTTGTACATAAGGCCTCTACTTGTCGGAAGT
GGTCCTATATTAGGTTTGGCTCCGGCACCTGAGTACACATTCCTT
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