CF510076

Overview
NameCF510076
Unique NameCF510076
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length450
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510076 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 5.756e-45
Identity = 85/124 (68.55%), Postives = 99/124 (79.84%), Query Frame = 1
Query:   82 TEAQLQLGFYAKSCPKAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNST-GNPERNAVPNQTLTGASFDFIERVKRLVEDECPGIVSCADILTLVARDSIVATGGPSWKVPT 450
            +EAQLQ+ FYAKSCP AEKI+ D++  HIHN PSLAA  +RMHFHDCFVRGCD SVL+NST GN ER+A PN TL G  F F+ER+K L+E  CP  VSCADI+ L ARD++VATGGPSW VPT
Sbjct:   25 SEAQLQMNFYAKSCPNAEKIISDHIQNHIHNGPSLAAPLIRMHFHDCFVRGCDGSVLINSTSGNAERDAPPNLTLRG--FGFVERIKALLEKVCPKTVSCADIIALTARDAVVATGGPSWSVPT 146          
BLAST of CF510076 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 5.387e-43
Identity = 80/123 (65.04%), Postives = 100/123 (81.30%), Query Frame = 1
Query:   85 EAQLQLGFYAKSCPKAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNST-GNPERNAVPNQTLTGASFDFIERVKRLVEDECPGIVSCADILTLVARDSIVATGGPSWKVPT 450
            +AQLQ+ FYA SCP AEKIV D+V+ H+ NAPSLAA+ +RMHFHDCFVRGCD SVL+NST GN ER+A PN T+ G  F FI+ +K ++E +CPGIVSCADI+ L +RD++V TGGP+W VPT
Sbjct:   23 QAQLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSGNAERDATPNLTVRG--FGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPT 143          
BLAST of CF510076 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 5.956e-42
Identity = 81/126 (64.29%), Postives = 101/126 (80.16%), Query Frame = 1
Query:   82 TEAQLQLGFYAKSCPKAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN---PERNAVPNQTLTGASFDFIERVKRLVEDECPGIVSCADILTLVARDSIVATGGPSWKVPT 450
            +EAQL++GFY ++CP AEKIV D VN+HI+NAPSLAA  +RMHFHDCFVRGCD S+L+N+T +    E+ A PN T+ G  FDFI++VK  +E +CPGIVSCADI+TL  RDSIVA GGP+W VPT
Sbjct:   21 SEAQLKMGFYDQTCPYAEKIVQDVVNQHINNAPSLAAGLIRMHFHDCFVRGCDGSILINATSSNQQVEKLAPPNLTVRG--FDFIDKVKSALESKCPGIVSCADIITLATRDSIVAIGGPTWNVPT 144          
BLAST of CF510076 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 1.126e-32
Identity = 70/124 (56.45%), Postives = 85/124 (68.55%), Query Frame = 1
Query:   82 TEAQLQLGFYAKSCPKAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQTLTGASFDFIERVKRLVEDECPGIVSCADILTLVARDSIVATGGPSWKVP 447
            + AQL   FY+ SCP  E +V   + + +  APSLA   LRMHFHDCFVRGCD SVLL+S GN   E++A PNQTL G  F F+ERVK  VE  CPG VSCAD+L L+ARD++  + GP W VP
Sbjct:   20 SSAQLDEKFYSNSCPSVEAVVRKEMVRALGAAPSLAGPLLRMHFHDCFVRGCDGSVLLDSAGNSTAEKDATPNQTLRG--FGFVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPFWAVP 141          
BLAST of CF510076 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.626e-31
Identity = 64/121 (52.89%), Postives = 88/121 (72.73%), Query Frame = 1
Query:   88 AQLQLGFYAKSCPKAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGASFDFIERVKRLVEDECPGIVSCADILTLVARDSIVATGGPSWKVPT 450
            AQL++GFY++SCP+AE IV + V +     P++ A+ LRMHFHDCFV+GCDAS+L++ST N E+ A PN ++    FD I+R+K  +E  CP  VSCADI+TL  RDS+   GGPS+ +PT
Sbjct:   22 AQLRVGFYSQSCPQAETIVRNLVRQRFGVTPTVTAALLRMHFHDCFVKGCDASLLIDST-NSEKTAGPNGSV--REFDLIDRIKAQLEAACPSTVSCADIVTLATRDSVALAGGPSYSIPT 139          
BLAST of CF510076 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.773e-31
Identity = 64/118 (54.24%), Postives = 82/118 (69.49%), Query Frame = 1
Query:   97 QLGFYAKSCPKAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGASFDFIERVKRLVEDECPGIVSCADILTLVARDSIVATGGPSWKVPT 450
            ++GFY+ +CP+AE IV   V  H  + P++A   LRMHFHDCFV GCD S+L+  + + ER A+PN+ L G  FD IE  K  +E  CPG+VSCADIL L ARDS+VAT G +W VPT
Sbjct:   33 RVGFYSSTCPRAESIVQSTVRAHFQSDPTVAPGILRMHFHDCFVLGCDGSILIEGS-DAERTAIPNRNLKG--FDVIEDAKTQIEAICPGVVSCADILALAARDSVVATRGLTWSVPT 147          
BLAST of CF510076 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.622e-31
Identity = 67/120 (55.83%), Postives = 86/120 (71.67%), Query Frame = 1
Query:   94 LQLGFYAKSCPKAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLN-STGNPERNAVPNQTLTGASFDFIERVKRLVEDECPGIVSCADILTLVARDSIVATGGPSWKVPT 450
            L++GFY K+CPKAE IV   V + + N  ++AA  LRM FHDCFVRGC+ SVLL       E+N++PN TL G  F+ I+ VK  +E ECPGIVSC+D+L LVARD++VA  GPSW+V T
Sbjct:   32 LKVGFYDKACPKAELIVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLELKNKKDEKNSIPNLTLRG--FEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVET 149          
BLAST of CF510076 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 8.069e-31
Identity = 64/116 (55.17%), Postives = 82/116 (70.69%), Query Frame = 1
Query:  106 FYAKSCPKAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQTLTGASFDFIERVKRLVEDECPGIVSCADILTLVARDSIVATGGPSWKVP 447
            FY +SCPKA++IV   V K   + P + AS LR+HFHDCFV+GCDAS+LL+S+G    E+ + PN+  +   F+ IE +K  +E ECP  VSCADIL L ARDS V TGGPSW+VP
Sbjct:   37 FYDQSCPKAQEIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEKRSNPNRN-SARGFELIEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVP 151          
BLAST of CF510076 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 3.066e-30
Identity = 61/118 (51.69%), Postives = 84/118 (71.19%), Query Frame = 1
Query:   97 QLGFYAKSCPKAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGASFDFIERVKRLVEDECPGIVSCADILTLVARDSIVATGGPSWKVPT 450
            ++GFY+++CP+AE IV   V  H+++ P+LAA  LRMHFHDCFV+GCD S+L++     E+ A  N  L G  ++ I+  K  +E  CPG+VSCADIL L ARDS+V +GG SW+VPT
Sbjct:   33 RVGFYSRTCPRAESIVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSILISGPAT-EKTAFANLGLRG--YEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPT 147          
BLAST of CF510076 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 4.005e-30
Identity = 66/120 (55.00%), Postives = 78/120 (65.00%), Query Frame = 1
Query:   88 AQLQLGFYAKSCPKAEKIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGA-SFDFIERVKRLVEDECPGIVSCADILTLVARDSIVATGGPSWKV 444
            A L   FY  SCP A+ IV  YV     N P +AAS LR+HFHDCFV GCDASVLL+S+G  E     N     A  F+ I+ +K  +E+ECP  VSCAD+L LVARDSIV  GGPSW+V
Sbjct:   39 ASLSPQFYENSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEV 158          
The following BLAST results are available for this feature:
BLAST of CF510076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER30_ARATH5.756e-4568.55Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER3_ARATH5.387e-4365.04Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER39_ARATH5.956e-4264.29Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER1_ORYSJ1.126e-3256.45Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER57_ARATH1.626e-3152.89Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]
PERN1_TOBAC2.773e-3154.24Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER56_ARATH3.622e-3155.83Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER72_ARATH8.069e-3155.17Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER2_ARAHY3.066e-3051.69Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER36_ARATH4.005e-3055.00Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-591 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510076 ID=CF510076; Name=CF510076; organism=Citrus sinensis; type=EST; length=450bp
GCAATTTCGTATAGGATAACAATGGGAAGGATAGACTACATTGGTGTAGT
ATTTTTAAGTCTTTTTGGTGTTGTAGGCCTGACTGAAGCTCAATTGCAAC
TGGGATTTTATGCTAAGAGCTGCCCAAAAGCTGAAAAGATTGTGTTAGAC
TATGTTAACAAACACATCCACAATGCCCCCTCATTAGCCGCATCTTTCCT
CAGAATGCATTTCCATGATTGCTTTGTCAGGGGCTGTGATGCATCCGTGC
TGCTAAACTCAACAGGCAATCCTGAAAGAAATGCTGTTCCAAATCAAACA
TTGACAGGCGCAAGCTTTGATTTCATCGAAAGAGTGAAGAGACTAGTCGA
AGATGAATGCCCCGGCATAGTTTCTTGTGCAGATATTCTTACGTTAGTTG
CAAGAGACTCTATTGTAGCCACAGGAGGTCCTTCCTGGAAAGTTCCAACC
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